ID A0AAE0RMS4_9BIVA Unreviewed; 830 AA.
AC A0AAE0RMS4;
DT 29-MAY-2024, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2024, sequence version 1.
DT 28-JAN-2026, entry version 7.
DE RecName: Full=Cold shock domain-containing protein E1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=CHS0354_039276 {ECO:0000313|EMBL:KAK3576342.1};
OS Potamilus streckersoni.
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
OC Autobranchia; Heteroconchia; Palaeoheterodonta; Unionida; Unionoidea;
OC Unionidae; Ambleminae; Lampsilini; Potamilus.
OX NCBI_TaxID=2493646 {ECO:0000313|EMBL:KAK3576342.1, ECO:0000313|Proteomes:UP001195483};
RN [1] {ECO:0000313|EMBL:KAK3576342.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CHS0354 {ECO:0000313|EMBL:KAK3576342.1};
RX PubMed=33570560; DOI=10.1093/gbe/evab029;
RA Smith C.H.;
RT "A High-Quality Reference Genome for a Parasitic Bivalve with Doubly
RT Uniparental Inheritance (Bivalvia: Unionida).";
RL Genome Biol. Evol. 13:evab029-evab029(2021).
RN [2] {ECO:0000313|EMBL:KAK3576342.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CHS0354 {ECO:0000313|EMBL:KAK3576342.1};
RC TISSUE=Mantle {ECO:0000313|EMBL:KAK3576342.1};
RA Smith C.H.;
RT "Developing a high-quality reference genome for a parasitic bivalve with
RT doubly uniparental inheritance (Bivalvia: Unionida).";
RL Genome Biol. Evol. 0:0-0(2021).
RN [3] {ECO:0000313|EMBL:KAK3576342.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CHS0354 {ECO:0000313|EMBL:KAK3576342.1};
RC TISSUE=Mantle {ECO:0000313|EMBL:KAK3576342.1};
RA Smith C.H.;
RL Submitted (MAY-2023) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the UNR family. {ECO:0000256|ARBA:ARBA00044751}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAK3576342.1}.
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DR EMBL; JAEAOA010002300; KAK3576342.1; -; Genomic_DNA.
DR AlphaFoldDB; A0AAE0RMS4; -.
DR Proteomes; UP001195483; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 2.
DR FunFam; 2.40.50.140:FF:000094; cold shock domain-containing protein E1 isoform X1; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_CS.
DR InterPro; IPR056400; CSDE1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR024642; SUZ-C.
DR PANTHER; PTHR12913:SF1; COLD SHOCK DOMAIN-CONTAINING PROTEIN E1; 1.
DR PANTHER; PTHR12913; UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN; 1.
DR Pfam; PF00313; CSD; 5.
DR Pfam; PF23456; CSDE1; 3.
DR Pfam; PF12901; SUZ-C; 1.
DR SMART; SM00357; CSP; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 5.
DR PROSITE; PS00352; CSD_1; 4.
DR PROSITE; PS51857; CSD_2; 5.
DR PROSITE; PS51938; SUZ_C; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP001195483};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 59..123
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 228..290
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 390..455
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 555..617
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 711..778
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 783..823
FT /note="SUZ-C"
FT /evidence="ECO:0000259|PROSITE:PS51938"
FT REGION 810..830
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 830 AA; 93118 MW; BC42186C55C6924D CRC64;
MSTVSRKMNS PQWKNFQPPV VQDPAILSYQ RAPNLLNSLI SSSPPKVTTT ININANQMRE
TGIVEKLLHS YGFIQCCDRD ARLFFHFSEY GGDMDTVSIG DAVEFQMSYD KRTGRPIACQ
VIKVDANSVS TEILSEERFI GTVVQEAKPG KVKNGIVGGT ADGLGRVTYE HNGECFFLPY
GLDDIVNSGN TQVKPGDQVT FFIARDKRNG NLHARKVEPA QAPATNQKYQ GVVCSMKDSF
GFIERADIVK EIFFHYSEFK GNINQLLLGD DVEFEIQTRN GKEVAVTITS MPQGTVIFED
VSVEKKKGKI SKTLKSSRRQ GDPLGGRVVY ESAKGPTEIP FGDKDQAGEY TLQQGDLVEF
HIATDRRDKL QRATQIKLLM ETFEKSTERR ELGVIASLKE GFGFIQCAER DARMFFHYSE
LLESANQASV GGEVEFTVTQ DPTTPSRQVA IRIQYMPVGS ITACTIRPEK YVGTIDREPA
DHKSPTKNKD NEFGNIVFDY EGAIKNIQYS AKDIAEPAHF PKYADKVEFN IGEQKRTGTW
FAVNIKVIFR NTVTKCQGFI ATLKDNYGFI ENADHDKEVF FHFSSVEGDA NELDLGDEVE
YTLTRKSTKT SAENIIRLPK GTVAAEEILR DKGVVLGRIV RPMRIVNPDQ EEYSGLVQVG
TEDDLDVQTY PYGITSLADK RDFLQKGDIV KFQVAVVKST KKERAVNIAA MRKYIRARVD
SIKDKYGFIN YEAEEGKKLF FHMTEVHDGV EIQSSDEVEF VVVQNQRNGK YSACSVRKIS
DIQRPERLIS RLKSVVDDNV GPKLIVLRQP KGPDGTKGFI QPRTPWKPPA
//
