ID A0AAE1XYE6_9LAMI Unreviewed; 1351 AA.
AC A0AAE1XYE6;
DT 29-MAY-2024, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2024, sequence version 1.
DT 28-JAN-2026, entry version 7.
DE SubName: Full=DExH-box ATP-dependent RNA helicase DExH11 {ECO:0000313|EMBL:KAK4419851.1};
GN ORFNames=Salat_2398000 {ECO:0000313|EMBL:KAK4419851.1};
OS Sesamum alatum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Pedaliaceae; Sesamum.
OX NCBI_TaxID=300844 {ECO:0000313|EMBL:KAK4419851.1, ECO:0000313|Proteomes:UP001293254};
RN [1] {ECO:0000313|EMBL:KAK4419851.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=3651 {ECO:0000313|EMBL:KAK4419851.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:KAK4419851.1};
RA Li T., Hu X., Zhang T., Song X., Zhang H., Dai N., Sheng W., Hou X.,
RA Wei L.;
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KAK4419851.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=3651 {ECO:0000313|EMBL:KAK4419851.1};
RX PubMed=37798879;
RA Miao H., Wang L., Qu L., Liu H., Sun Y., Le M., Wang Q., Wei S., Zheng Y.,
RA Lin W., Duan Y., Cao H., Xiong S., Wang X., Wei L., Li C., Ma Q., Ju M.,
RA Zhao R., Li G., Mu C., Tian Q., Mei H., Zhang T., Gao T., Zhang H.;
RT "Genomic evolution and insights into agronomic trait innovations of Sesamum
RT species.";
RL Plant 5:0-0(2024).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KAK4419851.1}.
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DR EMBL; JACGWO010000009; KAK4419851.1; -; Genomic_DNA.
DR Proteomes; UP001293254; Unassembled WGS sequence.
DR GO; GO:0055087; C:Ski complex; IEA:TreeGrafter.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IEA:TreeGrafter.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR FunFam; 3.40.50.300:FF:000354; ATP-dependent RNA helicase SKI2; 1.
DR FunFam; 1.10.3380.30:FF:000010; DExH-box ATP-dependent RNA helicase DExH11; 1.
DR FunFam; 3.40.50.300:FF:001047; DExH-box ATP-dependent RNA helicase DExH11; 1.
DR FunFam; 1.10.3380.30:FF:000001; Ski2 ATP-dependent RNA helicase; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR025696; Beta-barrel_MTR4.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C-like.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR050699; RNA-DNA_Helicase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF24; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KAK4419851.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP001293254};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 371..526
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 649..844
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 315..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 582..633
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 591..602
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 609..633
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1351 AA; 151756 MW; D8600C2687F44934 CRC64;
MDRVPAANDL SFRVGFTGHS GHLQIEPLPP VEQPNPLHSL PDFILPPAFP KETPETIKEY
IKEKYLLPRL DEDAFSPQKA GRQWEFDWFD RAEIQLEPSI PRSVVVPSWQ MPFKRKEHQS
ELHRWEPESV EVDVSELTVG AEDSGALPRI VGPAKDFVRG SINNRPFHPG GLDKTDSLEK
ILPDGACNGE WALELLHGGP AQVIPPGFRD GLDLGQLEAH SYTWNVYEKT ILNKSTSDVN
LNEISVQFDD LFNKAWEDDV MNFMEDGHVP ESEPQMESAH ESLQIKTKEE ELNAVDDVIK
KESILDEILS LGSADSKPRL DGDTNSSGEQ QKEGWALSGD SEGIAERFHE LVPDMALNFP
FELDPFQKEA IFYLERGDSV FVAAHTSAGK TVVAEYAFAL ASKHCTRAVY TAPIKTISNQ
KYRDFCGKFD VGLLTGDVSL RPEASCLIMT TEILRSMLYR GADIIRDIEW VIFDEVHYVN
DVERGVVWEE VIIMLPRHIN FVLLSATVPN TIEFADWIGR TKQKQIRVTG TTKRPVPLEH
CLFYSGELYK ICENEKIIPQ GLKAAKDAHK KKNSVSVIGT GSYSGSTAAN ERARNQRREN
SLHAKQNKHS GSQQMVDSSG ANRGTQTSGS NNWGSRRSEA AIWLSLINKL SKRSLLPVVI
FCFSKNRCDK SADNLTGTDL TTSSEKSEIR VFCDKAFSRL KGSDRNLPQV VRVQGLLRRG
IGVHHAGLLP IVKEVVEMLF CRGVVKILFS TETFAMGVNA PARTVVFDSL RKFDGKEFRG
LLPGEYTQMA GRAGRRGLDK IGTVVVLCRD EIPEEKDLKH VIVGSATRLE SQFRLTYIMI
LHLLRVEELK VEDMLKRSFA EFHAQKKLPE KQQLLMRKLA QPTKIIECIK GDPEIEDYYE
MYSEAERYSN KITEAIMLSP ISQQHLTPGR VVVVKAQLAQ DHLLGVIVKS PSANYKQYIV
LVLTPESPSI LKTSSDGREK TGADFQVLVP KSKRGLEDDY YSSVTSRRGS GIVNIKLPHR
GSAAGVNYEV RGVENNEFLS ICNCKIRIDQ VRLLEDVSAG AYSNTVQQLL TLKSDGNRYP
PALDPIKDLK LRDIKVVEDY YKWTNLLQKM AQSKCHGCVK LEENIMLARE LKRHREEVNA
LQFQMSDEAL QQMPDFQGRI DVLKAIGCID SDLVVQVKGR VACEMNSGEE LICTECLFEN
QLNDLEPEEA VAIMSAFVFQ QKNTSEPSLT PKLSQAKTRL YDTAIRLGEL QAKFKLQVDP
QEYAQENLKF GLVEVVYEWA KGTPFADICE LTDVPEGMIV RTIVRLDETC REFRNAAAIM
GNSALHKKME TASNAIKRDI VFAASLYITG V
//
