ID A0AAE2SBA0_9BACT Unreviewed; 637 AA.
AC A0AAE2SBA0;
DT 29-MAY-2024, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2024, sequence version 1.
DT 28-JAN-2026, entry version 8.
DE SubName: Full=Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:MBK1853749.1};
GN Name=selB {ECO:0000313|EMBL:MBK1853749.1};
GN ORFNames=JIN83_02150 {ECO:0000313|EMBL:MBK1853749.1};
OS Oceaniferula flava.
OC Bacteria; Pseudomonadati; Verrucomicrobiota; Verrucomicrobiia;
OC Verrucomicrobiales; Verrucomicrobiaceae; Oceaniferula.
OX NCBI_TaxID=2800421 {ECO:0000313|EMBL:MBK1853749.1, ECO:0000313|Proteomes:UP000634206};
RN [1] {ECO:0000313|EMBL:MBK1853749.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=5K15 {ECO:0000313|EMBL:MBK1853749.1};
RA Feng X.;
RT "Modified the classification status of verrucomicrobia.";
RL Submitted (JAN-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:MBK1853749.1}.
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DR EMBL; JAENIG010000001; MBK1853749.1; -; Genomic_DNA.
DR RefSeq; WP_309488347.1; NZ_JAENIG010000001.1.
DR AlphaFoldDB; A0AAE2SBA0; -.
DR Proteomes; UP000634206; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR031157; G_TR_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR PANTHER; PTHR43721:SF11; SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS00301; G_TR_1; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:MBK1853749.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000634206}.
FT DOMAIN 2..179
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 637 AA; 69334 MW; EC8C4A22F05E5A52 CRC64;
MSSYLVLGTA GHIDHGKSSL VKCLTGSDPD RLPEEKSRGV TIELGFAHMA LTDGEAHYEI
GIVDVPGHAD FVNNMVAGVG ALDLAIFIIA ADDGWMPQSE EHLHILSYLG IKNIVIALTK
ADLCEDVPFS IEVLRDELKD TSLADAPIVP VSSVTGDGID ALQQVLLENL HHCPQHPPEG
KARLAIDRIF SPKGTGTVVT GTLSGGAVHV GDSLTLQPLG LETKIRYIQN HNQSLETALP
GMRTALNVPD LPIAGPGKTG AQRGHSLCAP HIGTPTDTVD IHLQRLARPI PGFKARALKN
TETVMLHHGS TRCQARVILN DRTQLHPGED CLAQLRLETP LLFLTGDRVV LRDGSQQSTL
AGGTVLDAQP RRQGFRTEAR EHFLQARATS PDTIPPYLSS LLERDHQIPQ GNPLPNSPFH
PKAIAAQIKR MLSEGSIISH GGLWLDAPWW NAQLDAASKA INTWHRKRPD IPAMPTDELA
KQLPELPPKL LLLLPEAMEQ RGFLYNGKGL ANKKHQLTLP EEIAPEAQAI LKNLQQCGLQ
PPNKADLTAS AKSEQAMKFL IRSGQVIELD PKVVISTEVR NHAADRVTSF ISERGQATAS
ELRQHLDSTR KVVMPLLEHL DAIGLTIRND NYRTLAQ
//
