ID A0YGX4_9GAMM Unreviewed; 627 AA.
AC A0YGX4;
DT 23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 23-JAN-2007, sequence version 1.
DT 28-JAN-2026, entry version 88.
DE SubName: Full=Translation elongation factor, selenocysteine-specific {ECO:0000313|EMBL:EAW29992.1};
GN ORFNames=GP2143_06854 {ECO:0000313|EMBL:EAW29992.1};
OS marine gamma proteobacterium HTCC2143.
OC Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
OC Cellvibrionales; Spongiibacteraceae; BD1-7 clade.
OX NCBI_TaxID=247633 {ECO:0000313|EMBL:EAW29992.1, ECO:0000313|Proteomes:UP000004931};
RN [1] {ECO:0000313|EMBL:EAW29992.1, ECO:0000313|Proteomes:UP000004931}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTCC2143 {ECO:0000313|EMBL:EAW29992.1,
RC ECO:0000313|Proteomes:UP000004931};
RX PubMed=20601481; DOI=10.1128/JB.00683-10;
RA Oh H.M., Kang I., Ferriera S., Giovannoni S.J., Cho J.C.;
RT "Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143,
RT isolated from the Oregon Coast.";
RL J. Bacteriol. 192:4530-4531(2010).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAW29992.1}.
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DR EMBL; AAVT01000012; EAW29992.1; -; Genomic_DNA.
DR AlphaFoldDB; A0YGX4; -.
DR STRING; 247633.GP2143_06854; -.
DR eggNOG; COG3276; Bacteria.
DR Proteomes; UP000004931; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR CDD; cd04171; SelB; 1.
DR CDD; cd15491; selB_III; 1.
DR Gene3D; 1.10.10.2770; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR057335; Beta-barrel_SelB.
DR InterPro; IPR050055; EF-Tu_GTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR015191; SelB_WHD4.
DR InterPro; IPR005225; Small_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR InterPro; IPR004535; Transl_elong_SelB.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR00475; selB; 1.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR Pfam; PF25461; Beta-barrel_SelB; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF09107; WHD_3rd_SelB; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Elongation factor {ECO:0000313|EMBL:EAW29992.1};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000004931}.
FT DOMAIN 1..164
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 627 AA; 69380 MW; 5196EBDC2A78E9C6 CRC64;
MIIATAGHVD HGKTSLIKQL TGVDTDRLEE EKRRGLSINL GYAFKKLDDG QVIGFIDVPG
HTRFINSMIA GVGGIDMAML VVAADDGVMP QTTEHLDVLR LLGQQQFVVV ITKIDRVDIA
RVKEVTAQIK RLIGEDVTCF EINNINGEGI AELQRYLDSD ARNREAANDC GHFRMSIDRV
FSIKGSGLVV TGTALAGKVE EGDTLLLQPH QTHVRVRGIH AQDKKVTAGY AGQRCAINIS
GDIDRENVAR GNALVGESLS TLSRNCDVRF TLLASVNFPL KHLCPVKIHL GAGRFTGKIF
FLEQKRKLMP GESILAQILF DDPVSICHGD RFFLRDDSES ISLGGGIVLD PLAPQAKKST
AERLSTLNIL QSSDPKAVLN ALVIEQHQIV DFEAFKRSWN IRDQEQDQFI GEGTFVVAGE
MLSKAHWSDL TANVLSLVTK QHHEQPSSDG VSTLTLKAGL KDSVFTAVLS ELVHAHNVVI
KNGLVSLKQH TSRLSPEQQA LWTKIEQVYQ ESDTHLPVVA DLLKATNIQK KPLLSFLQSR
VNDGQLLRVN ENRFARPQEL YQLSNKAIEL GADGRAFDAR QYRDAIGMGR NLAIELLEYF
DEIRFTERSG NERHIINAST PEKLFKL
//
