GenomeNet

Database: UniProt
Entry: F1SSE7_PIG
LinkDB: F1SSE7_PIG
Original site: F1SSE7_PIG 
ID   F1SSE7_PIG              Unreviewed;       298 AA.
AC   F1SSE7;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2019, sequence version 4.
DT   28-JAN-2026, entry version 80.
DE   SubName: Full=Collagen type XV alpha 1 chain {ECO:0000313|Ensembl:ENSSSCP00000005774.4};
GN   Name=COL15A1 {ECO:0000313|Ensembl:ENSSSCP00000005774.4,
GN   ECO:0000313|VGNC:VGNC:86866};
OS   Sus scrofa (Pig).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX   NCBI_TaxID=9823 {ECO:0000313|Ensembl:ENSSSCP00000005774.4, ECO:0000313|Proteomes:UP000008227};
RN   [1] {ECO:0000313|Proteomes:UP000008227}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Duroc {ECO:0000313|Proteomes:UP000008227};
RG   Porcine genome sequencing project;
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSSSCP00000005774.4}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Duroc {ECO:0000313|Ensembl:ENSSSCP00000005774.4};
RX   PubMed=32543654;
RA   Warr A., Affara N., Aken B., Beiki H., Bickhart D.M., Billis K., Chow W.,
RA   Eory L., Finlayson H.A., Flicek P., Giron C.G., Griffin D.K., Hall R.,
RA   Hannum G., Hourlier T., Howe K., Hume D.A., Izuogu O., Kim K., Koren S.,
RA   Liu H., Manchanda N., Martin F.J., Nonneman D.J., O'Connor R.E.,
RA   Phillippy A.M., Rohrer G.A., Rosen B.D., Rund L.A., Sargent C.A.,
RA   Schook L.B., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R.,
RA   Tseng E., Tuggle C.K., Watson M., Smith T.P.L., Archibald A.L.;
RT   "An improved pig reference genome sequence to enable pig genetics and
RT   genomics research.";
RL   Gigascience 9:giaa051-giaa051(2020).
RN   [3] {ECO:0000313|Ensembl:ENSSSCP00000005774.4}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (AUG-2025) to UniProtKB.
RN   [4] {ECO:0000313|Ensembl:ENSSSCP00000005774.4}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2025) to UniProtKB.
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DR   AlphaFoldDB; F1SSE7; -.
DR   PaxDb; 9823-ENSSSCP00000023923; -.
DR   PeptideAtlas; F1SSE7; -.
DR   Ensembl; ENSSSCT00000005921.4; ENSSSCP00000005774.4; ENSSSCG00000005380.5.
DR   VGNC; VGNC:86866; COL15A1.
DR   eggNOG; KOG3546; Eukaryota.
DR   GeneTree; ENSGT00940000158302; -.
DR   HOGENOM; CLU_123121_0_0_1; -.
DR   Proteomes; UP000008227; Chromosome 1.
DR   Bgee; ENSSSCG00000005380; Expressed in subcutaneous adipose tissue and 38 other cell types or tissues.
DR   ExpressionAtlas; F1SSE7; baseline and differential.
DR   FunFam; 3.40.1620.70:FF:000002; Collagen alpha 1 (XV) chain; 1.
DR   Gene3D; 3.40.1620.70; -; 1.
DR   Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1.
DR   InterPro; IPR016186; C-type_lectin-like/link_sf.
DR   InterPro; IPR010515; Collagenase_NC10/endostatin.
DR   InterPro; IPR016187; CTDL_fold.
DR   InterPro; IPR045463; XV/XVIII_trimerization_dom.
DR   Pfam; PF20010; Collagen_trimer; 1.
DR   Pfam; PF06482; Endostatin; 1.
DR   SUPFAM; SSF56436; C-type lectin-like; 2.
PE   1: Evidence at protein level;
KW   Proteomics identification {ECO:0007829|PeptideAtlas:F1SSE7};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008227}.
FT   DOMAIN          78..126
FT                   /note="Collagen type XV/XVIII trimerization"
FT                   /evidence="ECO:0000259|Pfam:PF20010"
FT   DOMAIN          161..296
FT                   /note="Collagenase NC10/endostatin"
FT                   /evidence="ECO:0000259|Pfam:PF06482"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..18
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   298 AA;  32229 MW;  6B5FF614D5FDA55D CRC64;
     MMPGPPGLPG PPGPPGPPGA VINIKGAVFP IPVRPHCKTP VGTTHPGNSE LITFHAVALP
     GPPGPPGQPG LPGSRNLVTA FSNMDDMLQK AHLVIEGTFI YLRDSTEFFI RVRDGWKKLQ
     LGELIPLPAD SLPPPALSGN PHQPQLPLTS ISSVNYDRPA LHLVALNTPS SGDLRADFQC
     FQQARAAGLL STYRAFLSSH LQDLSTIVRK AERYSLPIVN LKGQVLFNNW DSIFSGHGGQ
     FNTHVPIYSF DGRDVMTDPS WPQKVVWHGS STHGVRLVDQ YCEAWRTADV AVMGLAPR
//
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