ID F2DJN3_HORVV Unreviewed; 306 AA.
AC F2DJN3;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 28-JAN-2026, entry version 58.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:BAJ95304.1};
GN Name=LOC123442913
GN {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0066080.1};
OS Hordeum vulgare subsp. vulgare (Domesticated barley).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
OX NCBI_TaxID=112509 {ECO:0000313|EMBL:BAJ95304.1};
RN [1] {ECO:0000313|EMBL:BAJ95304.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Shoot and root {ECO:0000313|EMBL:BAJ95304.1};
RX PubMed=21415278; DOI=10.1104/pp.110.171579;
RA Matsumoto T., Tanaka T., Sakai H., Amano N., Kanamori H., Kurita K.,
RA Kikuta A., Kamiya K., Yamamoto M., Ikawa H., Fujii N., Hori K., Itoh T.,
RA Sato K.;
RT "Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived
RT from 12 clone libraries.";
RL Plant Physiol. 156:20-28(2011).
RN [2] {ECO:0000313|Proteomes:UP000011116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Morex {ECO:0000313|Proteomes:UP000011116};
RX PubMed=23075845; DOI=10.1038/nature11543;
RG The International Barley Genome Sequencing Consortium;
RA Mayer K.F., Waugh R., Brown J.W., Schulman A., Langridge P., Platzer M.,
RA Fincher G.B., Muehlbauer G.J., Sato K., Close T.J., Wise R.P., Stein N.;
RT "A physical, genetic and functional sequence assembly of the barley
RT genome.";
RL Nature 491:711-716(2012).
RN [3] {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0066080.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Morex
RC {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0066080.1};
RA Scholz U., Mascher M., Fiebig A.;
RL Submitted (OCT-2020) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0066080.1}
RP IDENTIFICATION.
RC STRAIN=subsp. vulgare
RC {ECO:0000313|EnsemblPlants:HORVU.MOREX.r3.1HG0066080.1};
RG EnsemblPlants;
RL Submitted (JAN-2022) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AK364101; BAJ95304.1; -; mRNA.
DR RefSeq; XP_044975032.1; XM_045119097.1.
DR AlphaFoldDB; F2DJN3; -.
DR SMR; F2DJN3; -.
DR EnsemblPlants; HORVU.MOREX.r3.1HG0066080.1; HORVU.MOREX.r3.1HG0066080.1; HORVU.MOREX.r3.1HG0066080.
DR GeneID; 123442913; -.
DR Gramene; HORVU.MOREX.r2.1HG0052770.1; HORVU.MOREX.r2.1HG0052770.1; HORVU.MOREX.r2.1HG0052770.
DR Gramene; HORVU.MOREX.r3.1HG0066080.1; HORVU.MOREX.r3.1HG0066080.1; HORVU.MOREX.r3.1HG0066080.
DR KEGG; hvg:123442913; -.
DR HOGENOM; CLU_041798_1_1_1; -.
DR OrthoDB; 340431at2759; -.
DR Proteomes; UP000011116; Chromosome 1H.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IBA:GO_Central.
DR GO; GO:0061133; F:endopeptidase activator activity; IBA:GO_Central.
DR GO; GO:0070628; F:proteasome binding; IBA:GO_Central.
DR CDD; cd13314; PH_Rpn13; 1.
DR FunFam; 1.10.2020.20:FF:000002; 26S proteasome regulatory subunit RPN13; 1.
DR FunFam; 2.30.29.70:FF:000001; Proteasomal ubiquitin receptor ADRM1; 1.
DR Gene3D; 1.10.2020.20; -; 1.
DR Gene3D; 2.30.29.70; Proteasomal ubiquitin receptor Rpn13/ADRM1; 1.
DR InterPro; IPR044867; DEUBAD_dom.
DR InterPro; IPR006773; Rpn13/ADRM1.
DR InterPro; IPR044868; Rpn13/ADRM1_Pru.
DR InterPro; IPR038633; Rpn13/ADRM1_Pru_sf.
DR InterPro; IPR032368; RPN13_DEUBAD.
DR InterPro; IPR038108; RPN13_DEUBAD_sf.
DR PANTHER; PTHR12225; ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN; 1.
DR PANTHER; PTHR12225:SF0; PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; 1.
DR Pfam; PF04683; Rpn13_ADRM1_Pru; 1.
DR Pfam; PF16550; RPN13_C; 1.
DR PROSITE; PS51916; DEUBAD; 1.
DR PROSITE; PS51917; PRU; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW Reference proteome {ECO:0000313|Proteomes:UP000011116}.
FT DOMAIN 6..118
FT /note="Pru"
FT /evidence="ECO:0000259|PROSITE:PS51917"
FT DOMAIN 185..287
FT /note="DEUBAD"
FT /evidence="ECO:0000259|PROSITE:PS51916"
FT REGION 284..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..299
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 306 AA; 33508 MW; 0FEB974BF461E451 CRC64;
MESSEPLQDI MCEFRAGKMS LEGTRVVPDT RKGLVRIGKG EEGLVHFQWL DRGQNIVEDD
QIVFPDEAVF EKVAESSGRV YILKFRHDSR KFFLWMQETN ADGDSQICRQ VNAYINRPLD
GDAISIEAEM SHEDTADDDI SSRAGNLVDQ SMTADMAGEV TSAAGPVRLA DLQRILSSIQ
PSDATADPDA GLRLGDILKP DLILPLIETL PIEQLASHLP EGSWTAGDIL ELLQSPPLRQ
QLDAFTHVLQ TGQIDLAQFG VDPSKYKFTV ASFLEALEDS VANACTDGGN DSKTKKDGGN
DPMDES
//
