ID M4CVX7_BRACM Unreviewed; 126 AA.
AC M4CVX7; A0A398ABQ3;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2013, sequence version 1.
DT 28-JAN-2026, entry version 56.
DE RecName: Full=TF-B3 domain-containing protein {ECO:0000259|SMART:SM01019};
GN ORFNames=BRARA_B02334 {ECO:0000313|EMBL:RID75281.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EnsemblPlants:Bra008374.1-P, ECO:0000313|Proteomes:UP000011750};
RN [1] {ECO:0000313|Proteomes:UP000011750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|Proteomes:UP000011750};
RX PubMed=21873998; DOI=10.1038/ng.919;
RG Brassica rapa Genome Sequencing Project Consortium;
RA Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B., Hayward A.,
RA Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B., Liu B., Tong C.,
RA Song C., Duran C., Peng C., Geng C., Koh C., Lin C., Edwards D., Mu D.,
RA Shen D., Soumpourou E., Li F., Fraser F., Conant G., Lassalle G.,
RA King G.J., Bonnema G., Tang H., Wang H., Belcram H., Zhou H., Hirakawa H.,
RA Abe H., Guo H., Wang H., Jin H., Parkin I.A., Batley J., Kim J.S., Just J.,
RA Li J., Xu J., Deng J., Kim J.A., Li J., Yu J., Meng J., Wang J., Min J.,
RA Poulain J., Wang J., Hatakeyama K., Wu K., Wang L., Fang L., Trick M.,
RA Links M.G., Zhao M., Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q.,
RA Huang Q., Li R., Tabata S., Cheng S., Zhang S., Zhang S., Huang S.,
RA Sato S., Sun S., Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X.,
RA Xu X., Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT "The genome of the mesopolyploid crop species Brassica rapa.";
RL Nat. Genet. 43:1035-1039(2011).
RN [2] {ECO:0000313|Proteomes:UP000011750}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|Proteomes:UP000011750};
RX PubMed=30131865;
RA Zhang L., Cai X., Wu J., Liu M., Grob S., Cheng F., Liang J., Cai C.,
RA Liu Z., Liu B., Wang F., Li S., Liu F., Li X., Cheng L., Yang W., Li M.H.,
RA Grossniklaus U., Zheng H., Wang X.;
RT "Improved Brassica rapa reference genome by single-molecule sequencing and
RT chromosome conformation capture technologies.";
RL Hortic Res 5:50-50(2018).
RN [3] {ECO:0000313|EMBL:RID75281.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Bra008374.1-P}
RP IDENTIFICATION.
RC STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra008374.1-P};
RG EnsemblPlants;
RL Submitted (MAR-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM010629; RID75281.1; -; Genomic_DNA.
DR AlphaFoldDB; M4CVX7; -.
DR SMR; M4CVX7; -.
DR FunCoup; M4CVX7; 101.
DR STRING; 51351.M4CVX7; -.
DR EnsemblPlants; Bra008374.1; Bra008374.1-P; Bra008374.
DR Gramene; Bra008374.1; Bra008374.1-P; Bra008374.
DR HOGENOM; CLU_1984702_0_0_1; -.
DR InParanoid; M4CVX7; -.
DR OMA; KMENDEW; -.
DR Proteomes; UP000011750; Chromosome A02.
DR Proteomes; UP000264353; Chromosome A2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR051442; B3_domain.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR34269:SF10; TF-B3 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR34269; TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..118
FT /note="TF-B3"
FT /evidence="ECO:0000259|SMART:SM01019"
SQ SEQUENCE 126 AA; 14282 MW; 8DDFEEEFA7D986D0 CRC64;
MPPYTFVKTL SASDVGSQSR LMLQRSDAEN HILSHLSEEN NIAIQAGEGV MIRVCDRNSD
TEHVLVLKRM VNTTGSYVLN GGWIREFVNR RGWKEGQKIG LFWNSNKNSL DIYMLHPPPA
DKKNPN
//
