GenomeNet

Database: UniProt
Entry: M4E2F1_BRACM
LinkDB: M4E2F1_BRACM
Original site: M4E2F1_BRACM 
ID   M4E2F1_BRACM            Unreviewed;       300 AA.
AC   M4E2F1;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   28-JAN-2026, entry version 57.
DE   RecName: Full=TF-B3 domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Brassica campestris (Field mustard).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=3711 {ECO:0000313|EnsemblPlants:Bra022951.1-P, ECO:0000313|Proteomes:UP000011750};
RN   [1] {ECO:0000313|EnsemblPlants:Bra022951.1-P, ECO:0000313|Proteomes:UP000011750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra022951.1-P,
RC   ECO:0000313|Proteomes:UP000011750};
RX   PubMed=21873998; DOI=10.1038/ng.919;
RG   Brassica rapa Genome Sequencing Project Consortium;
RA   Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA   Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA   Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B., Hayward A.,
RA   Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B., Liu B., Tong C.,
RA   Song C., Duran C., Peng C., Geng C., Koh C., Lin C., Edwards D., Mu D.,
RA   Shen D., Soumpourou E., Li F., Fraser F., Conant G., Lassalle G.,
RA   King G.J., Bonnema G., Tang H., Wang H., Belcram H., Zhou H., Hirakawa H.,
RA   Abe H., Guo H., Wang H., Jin H., Parkin I.A., Batley J., Kim J.S., Just J.,
RA   Li J., Xu J., Deng J., Kim J.A., Li J., Yu J., Meng J., Wang J., Min J.,
RA   Poulain J., Wang J., Hatakeyama K., Wu K., Wang L., Fang L., Trick M.,
RA   Links M.G., Zhao M., Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q.,
RA   Huang Q., Li R., Tabata S., Cheng S., Zhang S., Zhang S., Huang S.,
RA   Sato S., Sun S., Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X.,
RA   Xu X., Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA   Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT   "The genome of the mesopolyploid crop species Brassica rapa.";
RL   Nat. Genet. 43:1035-1039(2011).
RN   [2] {ECO:0000313|EnsemblPlants:Bra022951.1-P, ECO:0000313|Proteomes:UP000011750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra022951.1-P,
RC   ECO:0000313|Proteomes:UP000011750};
RX   PubMed=30131865;
RA   Zhang L., Cai X., Wu J., Liu M., Grob S., Cheng F., Liang J., Cai C.,
RA   Liu Z., Liu B., Wang F., Li S., Liu F., Li X., Cheng L., Yang W., Li M.H.,
RA   Grossniklaus U., Zheng H., Wang X.;
RT   "Improved Brassica rapa reference genome by single-molecule sequencing and
RT   chromosome conformation capture technologies.";
RL   Hortic Res 5:50-50(2018).
RN   [3] {ECO:0000313|EnsemblPlants:Bra022951.1-P}
RP   IDENTIFICATION.
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra022951.1-P};
RG   EnsemblPlants;
RL   Submitted (MAR-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   AlphaFoldDB; M4E2F1; -.
DR   EnsemblPlants; Bra022951.1; Bra022951.1-P; Bra022951.
DR   Gramene; Bra022951.1; Bra022951.1-P; Bra022951.
DR   eggNOG; ENOG502S55S; Eukaryota.
DR   HOGENOM; CLU_761524_0_0_1; -.
DR   InParanoid; M4E2F1; -.
DR   OMA; HSHIVRY; -.
DR   Proteomes; UP000011750; Chromosome A03.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd10017; B3_DNA; 1.
DR   Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR051442; B3_domain.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   PANTHER; PTHR34269:SF18; TF-B3 DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR34269; TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED; 1.
DR   SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   REGION          48..69
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   300 AA;  32622 MW;  6F40F5B3E1D9303E CRC64;
     MIQDQQKLTQ DLLSLIPNVV REMPPISASE TDCLVSTTLC LYDPTWPKSS DDTKLSCGPR
     GNTGTEEKEN SLMKLKLLSN EGRQEEEQYG VSTELTLCTD PWTIKKKLTI SDRSRQNCLL
     LNPRPVHSHI MRYLPEVNQK MVQEGSGLTV DVYDHNTHTT HQMLLTKLTR RGSYVLSGGW
     LMDFVIRRAL KAKDEIGMYW DLSDSKLHFC VLSRAPTRVG SGSVLAVPSQ APIEVRSGSV
     LAGQSQAPIE ISSGSVLASP SQAPIEVSSG SVLAGPSQAP IGVSSGSVTI ASYSPLLADP
//
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