ID Y1786_ARATH Reviewed; 487 AA.
AC Q9SYL8;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 02-OCT-2024, entry version 105.
DE RecName: Full=Putative B3 domain-containing protein At1g78640;
GN OrderedLocusNames=At1g78640; ORFNames=T30F21.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; AC007260; AAD30572.1; -; Genomic_DNA.
DR EMBL; CP002684; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; B96815; B96815.
DR AlphaFoldDB; Q9SYL8; -.
DR SMR; Q9SYL8; -.
DR PaxDb; 3702-AT1G78640.1; -.
DR Araport; AT1G78640; -.
DR TAIR; AT1G78640; -.
DR HOGENOM; CLU_560633_0_0_1; -.
DR InParanoid; Q9SYL8; -.
DR PRO; PR:Q9SYL8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SYL8; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 2.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 2.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR051442; B3_domain.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR34269:SF11; B3 DOMAIN PROTEIN; 1.
DR PANTHER; PTHR34269; TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 2.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..487
FT /note="Putative B3 domain-containing protein At1g78640"
FT /id="PRO_0000412846"
FT DNA_BIND 171..269
FT /note="TF-B3 1"
FT DNA_BIND 379..474
FT /note="TF-B3 2"
SQ SEQUENCE 487 AA; 55276 MW; 8A7377E4756ED180 CRC64;
MAEEQREISH ENNVSLGSAE TAIPLTNVSI SPTKKEEQKT VYLVLFGRTI YVESSSLESE
ETVMPIVDVP KSPAKEDLTT HCSLDAESSE KGFPVDPYMG ILGNNPNINS NVTCAGNKDL
TEDIIKFKKM RSLSKEKIVE EKGTRVLTEL PPYTWTIKKT LKESDINHQC RLLLNTTDAE
NHIMRHLPTD DQKKIQEGIG VDVKAYDHDT YTEHDMVFKR HVKTSKSYVF NGGWAKAFVG
RRELKEGDKI GLFWAKKSQT FMSQEQQGTS PLNTDEALKS HHSFSQNPNY IESNLSRRYQ
TNFSLGSQRI SGQFLMIPNP GFVDTSSMTN THDTSLANFQ TVPTTTNPKI ILKEEKENEE
EQQYWTIKKE LTKSDACQRL TLSKSSVEEH ILKHLLPEDS QKIDKGKPGI TVKVYDNDTD
TEHELCLAFQ CSYVLKNGWV KTFVKRRGLE EGDMIGLFWE CSTSKLHFSV LFRVNAKAPA
AEEKEAY
//
