KEGG   Variovorax paradoxus S110: Vapar_5483
Entry
Vapar_5483        CDS       T00916                                 
Name
(GenBank) transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vap  Variovorax paradoxus S110
Pathway
vap02020  Two-component system
vap02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Vapar_5483
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Vapar_5483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vap03000]
    Vapar_5483
Transcription factors [BR:vap03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    Vapar_5483
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 TrmB PI-TkoII_IV GntR RNase_R_N HTH_24
Other DBs
NCBI-ProteinID: ACS22078
UniProt: C5D0I2
Position
2:complement(185417..186109)
AA seq 230 aa
MPSKAMETMLRESLWAQTLAAEELDRVVRESYEREVPAGGFVMRRGEPADLWLGVIEGLV
KMSLSLADGRVSTFTGVTSGGWAGEGSLLKPGPWRYDGVAMRPTRVACVPRHTFERLVST
NLDFDRFLLSHINARLSLFIGLMEFDRLLGPDARIARCLASLFDPILYPQASSFVRLTQD
EIGLLSAVSRQRANRALHALERAGLLRVEHGGVEVIDLEGLRNYVGEGSS
NT seq 693 nt   +upstreamnt  +downstreamnt
atgccgtcgaaggccatggagaccatgctccgcgagagcttgtgggcgcagaccctggcg
gccgaggaactcgaccgcgtggtgcgcgagtcgtacgagcgcgaggtgccggccggcggt
ttcgtgatgcgccgcggcgagcccgcggatctctggctcggcgtcatcgagggcctggtg
aagatgtcgctctcgctggccgatggccgcgtctccacattcaccggcgtgacctccggc
ggctgggccggcgaaggctcgctgctgaaacccggcccctggcgctacgacggcgtggcc
atgcgtccgacgcgcgtggcctgcgtgccgcgccataccttcgaacgcctggtgtcgacg
aacctcgatttcgaccggttcctgctgtcgcacatcaatgcccgcctgagcctgttcatc
ggactcatggagttcgaccgcctgctgggccccgacgcgcgcattgcacgctgcctggcc
agcctgttcgacccgatcctctatccgcaggcgagcagcttcgtacgcctgacccaggac
gagatcggcctcctgtccgcggtctcgcgccagcgcgccaaccgggcgctgcatgcgctc
gagcgcgcaggcctgctgcgggtggagcacggcggggtcgaggtgatcgatcttgaaggg
ctgcgcaactacgttggtgaagggagctcctag

  All links  
Gene (7)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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