KEGG   Variovorax xiamenensis: SFB74_23180
Entry
SFB74_23180       CDS       T11181                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vaw  Variovorax xiamenensis
Pathway
vaw02020  Two-component system
vaw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SFB74_23180
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SFB74_23180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vaw03000]
    SFB74_23180
Transcription factors [BR:vaw03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    SFB74_23180
SSDB
Motif
Pfam: HTH_Crp_2 cNMP_binding MarR_2 TrmB HTH_24 HTH_54 HTH_CodY MarR WHD_phage_rep HVO_A0261_N RepL Crp Rrf2 WHD_ArnR1 EAP30
Other DBs
NCBI-ProteinID: XVK57025
Position
5088921..5089703
AA seq 260 aa
MYLHPLIANVPPAERAALVHSCELRSFRRNETVLAADTWTDRIYCVASGLLRVVAHGKGN
PQASDVTTDFIRQDDFFLSPSFAEDRYQAMQTLVAALPSAVYLVPVAAIRRLCGAHPEVA
IGLLGLAMKRMSVIRSQLRRISALSAEDLVGRVLHQLTLLAPAGTGGYDKRITQSVIASY
SGLSREVVNKTMRDMENRGLVRRDEHGIHVQPDFAATDFGGLLPIEQSLSATEPLQHDPM
LPPEFFDMPRVRRAGESRED
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtacctgcatcccctcatcgccaacgtgccgccggcagaacgggcggcactcgtccac
agctgcgagctgcgctccttcaggcgcaacgagaccgtgctggccgccgacacctggacc
gaccgcatctactgcgtggccagcgggcttctgcgcgtcgtcgcccacggcaagggcaac
ccgcaggccagcgacgtcaccaccgacttcatccgccaggacgatttcttcctgagcccc
tccttcgcggaggaccgataccaggccatgcagacgctcgtggccgcactgccttcggcc
gtctacctggtgcccgtggccgccatccgccgcctgtgcggtgcgcatcctgaagtggcc
atcggcctgctcgggctcgcgatgaagcgcatgagcgtcatccgcagccagctgcgccgc
atctccgcgctatcggccgaagacctggtggggcgcgtgctgcaccagctcacgctgctc
gcgcccgcgggcacgggcggctacgacaagcgcatcacgcaatcggtgatcgcctcgtat
tcggggttatcgcgcgaggtggtcaacaagaccatgcgcgacatggagaaccgcggcctt
gtgcggcgcgacgagcacggcatccacgtgcagcccgacttcgccgccaccgacttcggc
gggctgctgcccatcgagcagagcttgtcggcgacggagccgctgcagcatgacccgatg
cttccgccggagttcttcgacatgccgcgcgtgcggcgcgcgggcgagtcccgcgaagat
tga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (15)   
   Pfam (15)   
All databases (16)   

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