KEGG   Vibrio cholerae O1 2012EL-2176: EN18_05485
Entry
EN18_05485        CDS       T03389                                 
Name
(GenBank) hypothetical protein
  KO
K20276  large repetitive protein
Organism
vcq  Vibrio cholerae O1 2012EL-2176
Pathway
vcq02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vcq00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EN18_05485
SSDB
Motif
Pfam: Big_3_3 DUF4165 Big_3_2 PKD PKD_4
Other DBs
NCBI-ProteinID: AIT32259
Position
unnamed:82441..87927
AA seq 1828 aa
MINFKPKIPAMLGALAVLTAGAAHAELLEYTFKAPDGTQRSLTPNANYANPTGNISFALS
AGIDRKVKISVLRSDGTVVSTATSHLLGATDRITVGGKSYYGAELQLPAPVGGAYTIRAE
ILASDGSTVQTDEYPLTVDVTPPTYSSLAPVYSNYGQVTSGDVWKLGLGGSEDNAFLLSG
ISDESPIKGVKAKLYRQDGSLYKDVSVNYDDANGQARQSFQSGFFPASDLDEVFTLQFEI
SDSAGNSYLSPRQKVMFDSITNAPSAPFGVYDPSSTNNLGPGLTGFVAYTEGMTVKTNPI
KLAWRVPRDNWHEYREGGINMTNALGEMSKVGEDASYVYLVTTAPYGNTDGNYWRWVNFG
QWGGGGIAYNLTLSPSAPKSPRLLGVDYNYSDIGWSSFYRYWVNNSVLPVTVSSIRVKVE
PRPYVQTAVHRGSCEIPVGQDSCVIANSFTMAKGTTGYVHDNATVFNPDKSLRSNPLWAE
VNWNDQHYPQLSQQFDQNSKVFTLFVNQPGRGAYFDRLRLRSAWIEDSKGNKLSPTGGLI
ANNWENYTYQWDLKTLPEGQYSLVAAAEEMHGPLTRQPMFQITSDRTPPTMTLSVADGAA
IQTLDDVVITLADAIDPSPKLTSIALVGGPANDKVQLSWREESKGRFRLEYPVMFPSLKE
GESYTLTVSGEDAQGNAVQKAVGFEYKPRQVMLADGMDGKVMVPAVTHEFVHADGKRIIE
TKPLTLSDGAVVTGSYDVFATLRSDAKVPLVVNGVRIEPGQTMGIMSQHDFGASGGRLSI
PVKPAVPDVVGSSSLLVMTSAPNSPILVVDINTWKGTAKLSAESWTIRQVIDPVKIYALP
ESGVPCRFTTKEDVAMAADPIRDPVCLLQWDRTPDEAEQTTQDNNGMKVAGLVGQAVSIG
EQPVEYSLYLFSGDGSKVKVGSGSQNLTVTTAYGSVGYTPIDDIAQVNRVIEDFDVNFKQ
SKGPDCSITLSADRAKKEAANKAVGSASRACLFEWQQIPDGLVQDPLSESPSLSGSLASN
GVHPLGWRVSIFTRNGTRVTLNDETFNVEAVDPPAPTVELASDYNFKDNIYLVPMTGNYL
GDAIINSERADLDIAISRNSDVLESETFTPGWGATNKVYRRINTDERALWEETTYKVNAA
YNKVPDVKTEVVYRAISAPSDSIRPIVEVKGDTAIDTQALPVRVLIRDQYKPDGDYDANT
MGVWKVRLIQQKAYNETVALTDYAEASNGEAQFSVDLSGVDTSSVRIAAEAVLESPVEGY
NRTELSIRPAFLTVLRGGAIGAGVEARKLSGEAPFTAVFKLSLDDRQDLRATGQVVWETS
KDDGKTWEQFIPEDRYKYQLVKTFDKGEYQVRAKVVNVNSGAEKYTEAVSVVAYDKPDIA
VIGPTTLFVGSEGKYTANLTLNDEPISGGNAIVEWSTDGGKTYAQTGDSITLSSDEETRY
RLWARVRSATAPADDGYAYEVAKTAVDFRAVKAPRPYVTGPRVIETGKKYVFKAETSLPY
RGMDVKLNGFFTLPDGSIVQGDTAEYEPSDTDLNQATVETKYTTWIEGYRDQGAEASHSL
RSRVWQYVWPSFGMQVRKNADVAPATITASVRPIAFNGKLEEPTYEWELPEGAVIQDQRQ
DIVRSFVINEPGDYNIKVTVRDARGHETVIEQPLKIGQAAPYAIDLQYSGSNKYEREPLD
VLLRPYISGGHPRDRISTRVYSVDGTPLESSGYYGRATLGAGEHSIKLKITSEMGHEAEG
EVNINVAENKLPACSLSSRETVGSWIVYANCEDTDGRMKSYEWTIAGELQSISSDRVTIS
KGTYETMPTISLVGVDDSGGKSEAVTMN
NT seq 5487 nt   +upstreamnt  +downstreamnt
atgatcaatttcaagcctaaaattccggcgatgcttggggctctggcggttcttaccgct
ggtgctgctcatgcagagctgctggaatacacctttaaggctccagatggtacgcaacgg
tctctgactccgaatgccaactatgccaacccaacgggcaatatctcgtttgccttgagt
gccggtatcgaccgaaaggtaaagatttcggtgcttcggtcggatggaacagtggtttcg
acagcgaccagccaccttcttggggctactgatcgcatcacagtgggtggaaaatcctac
tatggtgcggaacttcaactaccagctccagttggtggggcatacactatcagggcggaa
attcttgcctctgatggttctacagtacagacggatgaataccctcttactgtcgatgtg
acgccgccaacctactcttcgcttgccccggtttatagtaactatgggcaggttactagc
ggtgatgtttggaaactgggtctaggtggctctgaggataatgcctttttgctgtcagga
atctctgatgagtcacccatcaaaggcgtcaaagcaaagctgtatcgtcaagacggttca
ctctacaaagatgtatccgtgaactacgatgacgctaacggacaagctagacagtctttc
caatctggctttttcccagcctctgacttggatgaagtgtttacacttcagtttgagata
agcgatagcgctggaaatagctatctttcacctcgtcaaaaagtgatgtttgatagcata
accaatgctccgtctgcaccttttggtgtttatgacccttcaagtacaaacaacttaggc
cctggattaaccggatttgttgcttacactgagggcatgacagttaaaactaacccaatc
aagttagcttggcgtgttccgcgtgataactggcatgagtatagagaaggtgggataaat
atgaccaatgccttgggagagatgtccaaggtaggagaagatgccagctatgtttatctc
gtcacaaccgcaccttatggcaataccgacggcaattattggcgttgggtgaacttcggc
cagtgggggggaggcggtattgcttataacctcacactctctccatcagcgcctaaaagt
cccagacttttgggtgtggactacaattacagtgatataggatggtctagtttttaccgc
tactgggtgaacaattctgttcttcctgtcactgttagtagtatccgtgtcaaagttgaa
ccaaggccttacgttcaaactgccgttcacaggggaagctgtgaaattcctgttggtcaa
gatagctgcgtgattgcaaatagcttcacaatggctaaaggcacaacagggtacgtccac
gataatgcgacagttttcaatccggataaatctcttcgctcgaatcctctttgggcagag
gttaactggaacgatcagcactaccctcagctaagtcagcagttcgatcaaaatagcaag
gtatttaccttattcgttaaccagccaggacgaggcgcttactttgataggctgcgtctg
cgaagtgcatggattgaagatagcaaaggcaacaagctgtctccaactggtgggttaata
gccaacaactgggagaactacacttaccagtgggatcttaaaactctccctgaggggcaa
tacagtcttgttgccgcagcagaggagatgcacgggcctttaacgcgacaaccaatgttc
cagataacgtctgatagaacgccaccaaccatgacactcagtgtggcagatggagcagct
atccagactctagatgatgttgttattaccttggctgatgctatcgacccttcacctaaa
ttgacctctattgcccttgtaggggggcctgccaatgacaaggtgcagttgtcttggcgt
gaggagtcgaaaggtcgattccgccttgagtacccggtaatgttcccttctttgaaggaa
ggggaatcttacacgctgactgtttccggtgaggatgcacaaggcaatgcggttcaaaag
gctgttggcttcgagtacaaacctcgtcaggtaatgctggcggatgggatggatggcaag
gtcatggtccccgctgtcactcatgaatttgttcatgcagatggcaaacggatcatcgaa
accaagccgctgacgctcagtgatggtgctgtcgtgacaggttcatacgacgtgtttgcg
accctacgttctgatgcgaaagtaccgctggtggttaatggggtgcgtatcgagccaggc
cagacaatggggatcatgagccaacatgatttcggtgcgtcaggtggtcgtttgagcatt
ccggttaaacctgctgttcctgatgtggtcggctcttccagccttcttgtcatgacctcc
gcgccgaactcacccatcttggttgtggacatcaatacctggaaagggacggctaagctc
tctgctgaatcatggacaattcgccaggtcattgacccagtgaaaatctatgccctgcca
gagtcgggtgtgccttgccggttcaccacgaaagaggatgtggctatggccgcagaccca
attcgtgacccggtgtgtttgctccagtgggacagaactccagatgaggctgaacaaact
acgcaggacaacaacgggatgaaagttgctgggctggtggggcaggctgtgagcattggt
gaacaacctgtcgaatacagcctgtacctgttcagtggtgacggttccaaggtaaaagtt
gggtctggctctcagaacctgacggtaactactgcctatggctctgttggctacaccccg
attgatgacattgctcaggtgaatcgcgtcattgaagattttgatgtgaacttcaagcag
agcaaggggccagactgttctataaccctcagcgcagaccgtgcgaaaaaagaggccgcg
aacaaggctgttggtagtgcaagccgtgcctgtctgttcgagtggcagcagatccccgat
ggattggtccaagacccgttatcggaatcaccttcgctctctggttcattggcctccaac
ggcgttcatccactggggtggcgggtaagtattttcacccgtaacggcactagggtgacg
ttgaacgacgagactttcaatgtcgaagcggttgacccaccagctccgaccgttgaacta
gcctccgactacaacttcaaagacaacatctacttggtgccgatgacaggtaactacctg
ggtgatgccattatcaactctgaacgagctgatctggatattgccatatcgcgcaactcg
gatgttcttgagtctgagaccttcactccgggatggggtgccaccaataaggtgtatcgc
cgcatcaataccgatgagcgagcgttgtgggaggagaccacctacaaggtgaacgcggcc
tacaacaaggtgcctgatgtgaagactgaggttgtctaccgggctatctctgcaccttct
gacagtatccgtcctatcgttgaagttaaaggtgataccgcgattgacacccaggcattg
ccggttagggttctcatccgtgatcagtacaaacctgatggtgactatgacgctaacacg
atgggggtgtggaaagtacgcctgatccagcaaaaggcctacaacgagacggttgcgctc
actgattatgcggaagcatcgaacggtgaagctcagttctcagtagacctgtctggtgtg
gatacttcctccgtccgtatcgctgctgaggctgttctggaaagccctgttgagggttac
aaccgcacagagttgtctatcagacctgccttcttgacagtgcttcgcggtggtgccatc
ggtgctggcgtggaggctcgcaagttgtctggtgaagctccgttcactgctgtgttcaag
ctatctttggacgaccgtcaggatctccgggctaccggccaggttgtgtgggaaaccagt
aaggacgacggtaaaacctgggagcagttcatcccagaagatcgatacaagtatcagctt
gtgaagaccttcgacaagggggagtaccaggttcgggccaaggtggtgaacgtcaactca
ggtgcggaaaagtacaccgaagcggtcagtgttgtcgcttacgacaaacctgatattgct
gttatcggcccgaccacgttgtttgtcggaagtgaaggcaagtacacagcgaacctgacg
ttgaacgatgagccaatctccggtggcaatgccattgttgagtggtctactgacggtggc
aaaacctacgcgcagacaggggatagcatcacgctttcgagcgatgaagaaacccgatac
cgcctgtgggctcgtgtgcgctctgccacggcaccggctgatgacggctatgcctatgaa
gttgcgaaaacggcggttgacttccgagcagtgaaggcacctcgtccttacgtgacaggg
ccgcgagttattgagaccggtaagaagtatgtgttcaaagccgaaaccagcctgccttac
cgtgggatggacgtgaagctgaacgggttcttcacgctgcctgatggctcgattgtgcag
ggtgatactgctgagtacgaaccctctgacactgacctcaatcaggctactgtagaaacg
aagtacaccacctggatcgaaggataccgagatcagggtgcagaggcttcgcatagccta
cgctcccgcgtttggcagtatgtatggccgagcttcggaatgcaggttaggaagaacgca
gacgtggctcctgcgacgatcaccgcgtcagtgcggccaattgccttcaacggcaagctg
gaagagccgacctacgagtgggagttgccggaaggcgctgtgattcaggatcagcggcag
gatattgtccggtcctttgtgatcaatgagccgggtgattacaacatcaaggtcactgtc
cgtgatgctcgcggccatgagaccgtgatcgagcaaccgctcaagatcggccaggcagcg
ccctatgccattgacctgcaatactctggctcgaacaaatacgagcgtgagcctctggat
gtgctgttgcgaccgtacatttctggcggccacccacgcgaccgtatttcgactcgtgtt
tattcggtagatggtacaccgttggaaagcagtggttactacggcagagcaactctgggc
gctggtgagcacagcatcaagctgaaaataacctcagaaatggggcatgaagctgagggc
gaggtgaacatcaatgttgcagagaacaagttgcctgcatgtagcctgagctcacgagag
accgttgggtcgtggatcgtctatgcgaactgcgaagataccgatggccgcatgaagtcc
tacgaatggaccattgccggtgagttgcagagcatcagctctgatcgagtgactatcagc
aagggcacctatgaaacgatgccgaccatctctctggttggggtcgatgactctgggggc
aaatccgaagctgttaccatgaactaa

  All links  
Gene (42)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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