KEGG   Varroa jacobsoni: 111260310
Entry
111260310         CDS       T07417                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
vja  Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:vja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vja03041]
    111260310
Spliceosome [BR:vja03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    111260310
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    111260310
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 111260310
NCBI-ProteinID: XP_022688681
Position
Unknown
AA seq 1271 aa
MPKRRHDSSSSSADEEGGAGDGTAAAPGGGSSSDSSRSATPERAAREGTVESTSSRRDDS
RDTITRERDRRYAEERAADRDRGRCEEILCVRTGSVASSRETSLSRRGTSQERESSEDKI
SHELKSETKKHDETRIDEKEQGKVDSVAAKTENLAIATSQALAPSPKAFGPPEEHPDTLQ
LQAAEMSGSDEENEDKNRSNRNDQDQPAKSSGTNETAEESSPLKPAHSLGKKVRGIVTDT
SSSGSESGDDTAAQQENVTQGKHVRTTKTTKAPRRQRQSESGRSSATATDRDSSSEREND
APDQQDSANQAKHPRTASKPGKGSKRKRRSESGQSSVSDMDNDSSEDEHDVTKGRRLKSQ
IVQAPPPVALAPARAPLQAQAEEPPKKKTVDPLLTRTGGAYIPPAKLREMQKNVTDKGTI
EYQRIAWEALKKSINGLVNKVNVSNIKEIVFELFRENLIRGRGVLARAIMQAQAFSPTFT
HVYAALVAVINSKFPQTGELIMKRTILQFKRGFRRNDKTMCVSSVKFLAHLFNQQVAHEV
IVLEILTLLLEKPTEDSVEVAIAFLKEAGQMLTDVSPRGVLAIMERLRHILHEGAVDKRC
QYMIEVLAAVRKEGFKDHPHVIPELDLVQEADQFTHMLSLEEVNDGQDVLNIFKFDPLYE
ENEEKYQGIYKSIVGDSGSSSSGSDSSESSSESSEDDEGKQPKTEDAIVDMTETNMVALR
RTIFLTIQSSLNFEECVHKLLKLEIKPAQIPEMCHMVLDCCAQQRTYEKFFSLVAQRLCM
IRREYMEPFCEIFVNAYETVHRLDTNKLRNCAKFFANLLHSDAIPWQALSVIKLGEETTN
SSSRIFIKILFQELAEFMGLVKLNERVKDPTLQEVFDGLFPRNSPQNTRFAINFYTSIGL
GGLTDDLREHLKTMPKKPPPVVKEFSNSSSSSSSSSSSDSSDSSDSDDSSSSDSSSSSSS
SSSSSSSSSSSSSTSSSSSDDGDRRKNAAKKKKESVSKNGKVDINNQEKPPKGRSNADRN
HNGHAYKRDKNKDRDFDEKTGHRQFDDRRREDATGRKDRKDDRSRKDTLDNEEQERSRRH
GHDDRREDHRRLDESYKDSRSMQEDERKYRNKHLGDDQDTQDEENGRKNLDKKNSKNTDA
WNHDRSPRASAKSKSLADTSVEANPSHCRRGRVEEDKENRKKRRRASGNNDPEERDDGRR
RDHKKGRRERSQEHGDEPRPDRQDEQVKQSGKHKGKKDKDRREDGRSNRHERRRAEEHSS
ESRRKRHRSTS
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgccgaaaaggcggcatgattcgtcttcgtcgtctgccgatgaggaaggtggcgcaggc
gatgggacagcggctgcccctggagggggctcgagttccgattcgtctcggagtgccact
ccagagcgtgcggctcgtgagggaacggtagagagtacttcaagccggcgagacgactcc
cgggatacgattacacgtgaacgtgatcgccggtacgcggaagaacgtgctgcggatcgc
gatagaggccgatgcgaagagattctttgtgtgcgcacaggctcggttgcatcatcgcgc
gaaacttcactcagtcggcgtgggacttcgcaggaacgcgaaagtagtgaagataagatc
tcgcatgaactcaaatctgaaacaaagaaacacgacgaaacacgtatagatgaaaaagag
cagggcaaggtggattcggttgcagcgaagactgaaaatttagctattgctacgtcgcaa
gcacttgcgccatcgccaaaagcttttggacctcctgaagaacatccagatacattgcaa
ctgcaggcagctgaaatgagtggcagcgatgaagagaacgaagataaaaacagatctaat
cgaaatgatcaagaccaacctgctaaaagcagtgggaccaacgaaacagccgaggaaagc
agtccattaaaaccagcacactccctgggcaagaaggtccgaggcatagtgacagatacg
tcgtccagcggtagtgaaagtggggacgatactgcagctcaacaagagaacgtcacgcaa
ggaaaacatgtgcgtacgacaaaaactacaaaagcgcctcgtcggcagcgccaaagtgaa
agcgggcgcagctcagcaaccgcaacggaccgcgatagcagcagtgaaagagaaaacgat
gcccctgatcagcaggatagtgccaaccaagcgaagcaccctcggaccgcctcaaagcct
ggaaaaggttccaaacggaagcgtcgaagtgaaagcggacaaagttcagtcagtgatatg
gacaacgacagtagcgaggatgaacacgatgtaacgaagggacgccgtttgaagtcccag
attgtacaggctccaccgccggtggcattagctcctgctcgggctccgttgcaggcccaa
gcggaggaacccccaaaaaagaaaacagttgacccactgctaacaagaacaggtggggcg
tatattccaccagcgaaattacgggaaatgcaaaagaatgttacggataaaggaactatt
gagtaccagaggatcgcatgggaggcgctcaagaaaagcatcaacggtctagttaataaa
gtaaacgtatccaacataaaagagatcgttttcgagcttttccgtgaaaatttaatccgt
ggccgtggtgtgctagctcgggcaataatgcaggcccaggcattttcaccgactttcact
catgtctacgcagcccttgtggctgttatcaactccaaatttcctcagaccggtgaacta
attatgaaaaggacaatcttacaatttaagcgtggattccggcggaatgataaaactatg
tgtgtgtcgagcgttaaatttcttgctcacctgtttaatcagcaagtggcccacgaagtc
atcgttcttgaaattcttaccctactccttgagaagcctacagaagattcggttgaagtt
gccattgcctttttaaaagaagcgggacagatgctcacggacgtgtcgccgcgtggagta
ctggcaattatggagcgtctgcgccatatacttcacgaaggtgctgtcgataaacggtgc
cagtatatgattgaggttttggctgcggttcgtaaagaaggttttaaagatcatccacat
gttattccagaattagatcttgtccaagaagccgaccagttcacgcatatgcttagctta
gaagaggtaaatgacggacaagatgtactaaatatctttaaattcgatcccctctatgaa
gaaaacgaagagaagtatcagggcatctacaaatcgatcgtaggtgatagtggcagtagc
agctcagggagtgattcgtccgaatcgtcatcggaatcctctgaagatgatgagggaaaa
caaccgaagactgaggatgctattgtcgacatgacggaaactaacatggttgccttacgg
cggactatttttctaacaatacaaagttcactgaatttcgaagaatgtgtccacaagtta
cttaagctcgaaatcaaacctgcacagatacccgagatgtgtcacatggtcctggattgc
tgtgctcaacagagaacatatgagaaatttttctcattagttgcccagcggctatgcatg
attagacgcgaatatatggaacctttctgtgagatctttgttaacgcttacgagacagta
catcggctcgacaccaataaacttcgtaattgtgcgaagttcttcgcaaatctcctacac
agtgatgcaattccgtggcaggcgttaagtgttatcaaactcggtgaagaaacaaccaac
tcgtcgtcgcgaatctttatcaaaattctattccaagagctcgcggagtttatggggttg
gtgaaactaaacgaacgagtaaaagatcctacactgcaagaagtatttgatggccttttt
ccaaggaattcaccacaaaacacgcgcttcgcaataaatttctacacttctattggactt
ggaggcttaaccgatgatcttcgcgaacatctaaaaactatgccgaaaaagccgccacct
gttgtcaaggaattttctaattcctcatctagctcttcaagttcatcctctagtgacagc
agcgattcttcagattctgacgattcttcatccagcgattcatcgagctcatcatcatca
tcatcgtcgtcgtcgtcatcatcttcttcttcttcgtcgacttcatcatcaagcagcgac
gatggagaccggcgaaagaacgcggccaagaaaaaaaaagaatcagttagtaaaaacgga
aaagtcgatatcaacaaccaagaaaagcctccgaaaggtcgaagcaatgctgatcgtaac
cataacggccatgcttataaacgcgataaaaacaaggaccgagatttcgatgaaaaaacc
ggccatcgacagttcgatgatcggcgaagagaagatgctactggaagaaaggaccgcaaa
gacgaccgcagccgaaaagacaccctggataacgaggaacaagaacgaagccgccgacat
ggccatgacgatcgtagagaggatcaccgacggctggacgaaagctataaggactcaaga
agcatgcaagaagacgaacgaaaatatcgtaataaacatctaggagatgatcaagatacc
caggatgaggaaaacggtcgtaaaaatttggacaagaaaaattctaaaaatacggatgcc
tggaaccatgacagaagtccacgggcgtcggcaaaatcaaagagtttagctgacacaagt
gttgaggccaatccaagtcattgccgcagggggagggttgaggaagataaagagaatcga
aagaagcgtcgacgggctagcggtaataatgaccccgaagaaagagacgatggccgaaga
agagatcataaaaagggccgcagagagaggtctcaggaacatggggatgagccacggcca
gaccgacaggacgagcaggtaaaacaatccgggaaacacaaaggcaaaaaggataaagat
agacgcgaagacggccgatcaaacagacatgagaggcgacgggccgaagagcactcgagt
gaaagccgacgaaaacgacatagaagcactagttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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