KEGG   Vibrio metoecus: QYQ96_12440
Entry
QYQ96_12440       CDS       T09673                                 
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vmt  Vibrio metoecus
Pathway
vmt05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vmt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    QYQ96_12440 (fis)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vmt03000]
    QYQ96_12440 (fis)
   03036 Chromosome and associated proteins [BR:vmt03036]
    QYQ96_12440 (fis)
   03400 DNA repair and recombination proteins [BR:vmt03400]
    QYQ96_12440 (fis)
Transcription factors [BR:vmt03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QYQ96_12440 (fis)
Chromosome and associated proteins [BR:vmt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QYQ96_12440 (fis)
DNA repair and recombination proteins [BR:vmt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      QYQ96_12440 (fis)
SSDB
Motif
Pfam: HTH_8 HTH_30 Xre-like-HTH DUF134 HTH_28
Other DBs
NCBI-ProteinID: WKY93009
Position
1:2719059..2719355
AA seq 98 aa
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq 297 nt   +upstreamnt  +downstreamnt
atgttcgaacaaaatctgacttcagaagctttaaccgttactaccgtaacttcacaagac
caaatcacgcaaaagccactgcgtgactctgttaaagcgtctcttaaaaattacttggct
caactgaacggccaagaagtgactgaactgtatgaattagttctagctgaagttgaacaa
ccacttctggacaccatcatgcaatacactcgcggtaaccaaactcgcgcagcaactatg
atgggtatcaaccgcggcactcttcgtaagaaactgaaaaaatacggcatgaactaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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