KEGG T04844: A9237

Vibrio owensii: A9237_11015

Entry

A9237_11015       CDS       T04844

Symbol

rumA

Name

(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

vow Vibrio owensii

Brite

KEGG Orthology (KO) [BR:vow00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vow03009]
    A9237_11015 (rumA)
Enzymes [BR:vow01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     A9237_11015 (rumA)
Ribosome biogenesis [BR:vow03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A9237_11015 (rumA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM TRM5-TYW2_MTfase MTS RrnaAD Cons_hypoth95 PCMT Methyltransf_11 Methyltransf_23 Methyltr_RsmB-F PrmA Methyltransf_15 Methyltransf_12 Ribosomal_L22 TPMT

Other DBs

NCBI-ProteinID:

AQW58553

Position

1:2386152..2387471

AA seq 439 aa
MARIFQPKKKTQLNTRHQAVQVERLDHHGAGIAYLKKKPLFIDGALPGEEVVTQLVEEKS
KFARGKLIKILKPSDARVEPFCPHYHECGGCDLQHLNYDQQLTHKQQTLRQLMRKFAGSD
IELDAPVLGESFGYRRRARVSLFVDKKTRQLHFGFRKKQSKQIAQVTDCPVLAPELNVLL
PEIYSTLKAFKKPEQLGHVELVLGDNGPCITLRHLSKLTEKETNSLVELAKRHNASLYLM
PETDQLDLIEGEVPFYQEAGVTVPFTPNNFIQVNQAVNQKMVAQAVEWLDPQSDERVLDL
FCGLGNFSLPIAKRAKHVVGVEGVAEMVEKAANNASLNQINNAQFYHANLEQDFEGQVWA
AEQFDKVLLDPARAGASGIIDQVSALGAQRVVYVSCNPATLARDSQSLLEQGYQLTKLGM
LDMFPHTSHLESMALFEKS

NT seq 1320 nt +upstreamnt +downstreamnt
atggcacgtatctttcaacctaaaaagaaaacgcaactgaatacccgccaccaagcggta
caagtggagcgtttggatcaccacggcgcaggcattgcttaccttaagaagaaaccattg
tttattgatggtgcgctaccgggtgaggaagtggtaacccaattggtggaagaaaagagc
aaattcgctcgcggtaagttgattaaaatccttaaaccgagtgacgctcgcgtggagcca
ttttgtccgcactaccatgaatgcggtggctgtgacctgcagcatctgaactatgaccaa
caattgacgcacaagcagcaaacgcttcgccagttgatgagaaaatttgccggcagtgat
atcgagttggatgcgcctgtattgggtgagtcttttggctaccgtcgccgtgctcgagtg
agcttgttcgtagataaaaagactcgtcagttgcactttggtttccgcaagaaacagagt
aagcaaatcgcgcaagtgacggattgtccagtgctcgcacctgagttgaatgtgctattg
ccagaaatctactcgacgttaaaagcgtttaagaagccagagcaacttggtcacgtagag
ttggtgctaggcgataatggtccatgcatcacattgcgtcatctaagcaagctgacggaa
aaagaaactaactcgttggtggaattggcgaagcgtcacaatgcatcgctctacttaatg
ccagaaacggatcagcttgatttgattgaaggtgaagtgcctttctatcaagaagcgggt
gtcaccgtgccatttacgccaaataactttattcaagtgaaccaagcagtaaaccagaaa
atggtcgctcaggctgtggagtggttagacccacaaagtgatgaacgagtgttagatttg
ttctgtggcttgggtaactttagtttgcctatcgcgaaacgtgcaaaacacgtagtgggc
gtagaaggcgtggcagaaatggtggaaaaggcggcaaataatgcatctttgaaccaaatc
aataacgcgcaattttatcacgctaaccttgagcaggattttgaagggcaagtttgggcg
gctgaacaattcgacaaagtgctgcttgatcctgcacgcgctggcgcgagtgggatcatc
gatcaagtttctgcgcttggcgcacagcgtgtagtttatgtttcgtgtaatcctgctacc
cttgcaagggatagtcagagcttgctggagcaaggctaccaattaaccaaattaggtatg
ctggacatgttccctcataccagccatctagaatcgatggcactgtttgaaaagtcctga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (19)   

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