KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1803
Entry
VPBB_1803         CDS       T02409                                 
Name
(GenBank) transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb02020  Two-component system
vpb02024  Quorum sensing
vpb05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VPBB_1803
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VPBB_1803
   05111 Biofilm formation - Vibrio cholerae
    VPBB_1803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpb03000]
    VPBB_1803
Transcription factors [BR:vpb03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    VPBB_1803
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp WHD_RecQ_mid_bact MarR_2 RepL TrmB HTH_24 HTH_11 KORA GadE_N Phage_rep_O
Other DBs
NCBI-ProteinID: AGB10275
Position
1:2007793..2008485
AA seq 230 aa
MEDIKSLLLQCPVLAGLPVEGINEAVQIVRARHFDEKALICSKGAQHSSLMVIAKGSVRV
NSISSKGKEVTLMIFEAGGWFGDNVFSPGMPRIFGATAHTDVTLLELPGDKFRQLLVKYP
QSYPVILDLLSRRLWSAISVIEDDAIRGIEERIGRRLLLLAEYQHNRPISAQSCVVKVTR
EHIANMMGLTRQSVHKVLKKLENSNVLRLQYGSITILNPLKMEAYLKQLE
NT seq 693 nt   +upstreamnt  +downstreamnt
atggaagatatcaaatcgttgttgctgcaatgccctgttttagccggtttgccagtggaa
ggaataaacgaagcagtacaaatcgttcgcgcacgacacttcgacgaaaaagcactcatt
tgcagcaaaggcgcgcagcactcttcattaatggtgatcgccaaagggtctgtacgcgtt
aactcgataagttccaaaggaaaagaagtcaccttgatgattttcgaagccggaggatgg
tttggcgacaatgtattttcacccggcatgccacgtattttcggagcaacagctcatacc
gacgtaaccctattagagctacctggcgataaatttcggcagttgttagtcaaatatcca
caaagctaccctgtgattctggatttgctcagccgcagattatggtcagctatttccgtt
atcgaagacgacgccattcgcggtatagaagagaggatcggcagacggttattacttctg
gcagaatatcaacataaccgtcctataagtgcccagtcttgtgtagtgaaagtgactcgt
gagcacatcgccaacatgatggggctaacacgacaaagtgttcataaggtactaaagaaa
ttggaaaactcgaacgttcttaggctgcaatacggcagtattaccatattgaatcctctg
aaaatggaagcgtatctcaaacagttggaatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (14)   

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