KEGG   Variovorax paradoxus B4: VAPA_1c37910
Entry
VAPA_1c37910      CDS       T02835                                 
Name
(GenBank) transcriptional regulator, LysR family
  KO
K21645  LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpd03000]
    VAPA_1c37910
Transcription factors [BR:vpd03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    VAPA_1c37910
SSDB
Motif
Pfam: LysR_substrate HTH_1
Other DBs
NCBI-ProteinID: AGU50873
UniProt: T1XE83
Position
1:4007980..4008894
AA seq 304 aa
MLKIRLDMQFKWMEDFIALAETRSFTRAAELRHVTHPAFGRRIRALESWAGTALIERGSS
PVVLTAAGESFLDNASQVVRGIEGSREEMHNVAGRQARTVTLVTGRTLARTVMADWLVRL
QPMLRHGEVRVLTGALAETVRMLEHNEVDFSLIFHHAALTFRLDGRQFSHVTVASDKLVP
VSRADAQGRAVHGFDGTGEVPFLSYVRTLAMGRMVEDLLTNNPQAPRLKRCIECDSADAL
YEYVLRGLGVAWLPWSMVQGDCRAGRLVPAGGRRMEVRFEVRLYRPKRRLGPLAEDVWRA
MASR
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcttaagattcgtctcgacatgcaattcaaatggatggaagacttcatcgccctggcg
gaaacgcgcagctttacgcgcgccgccgagcttcgccacgtcacgcatcccgccttcgga
cgccgcatccgcgcactcgaatcatgggccggcacggcgctgatcgagcgcggcagctcc
ccagtcgtgctgacggccgcgggcgagagcttcctggacaacgccagccaggtggtgcgc
ggcatcgagggctcgcgcgaggaaatgcacaacgtggccggtcggcaggcccgcacggtc
acgctggtcaccggccgcacgctggcacgcacggtgatggccgactggctggtgcgcctg
cagcccatgctgcgccacggcgaggtacgggtgctgacgggcgcactggcggagacggtg
cggatgctggaacacaacgaggtggatttctcgctgatctttcaccatgccgcgctcact
ttccggctcgacgggcggcagttttcccatgtgactgtggcgtccgacaagctcgtgccc
gtgtcacgcgccgacgcacagggccgtgcggtgcacggcttcgacggtaccggcgaagtg
ccgtttctctcgtacgtccgcacgcttgcgatgggccgcatggtggaagacttgctgacc
aacaacccgcaggcgccgcgtctgaagcgttgcatcgaatgcgattcggccgatgcgctc
tacgagtacgtgttgaggggcctgggcgtggcgtggctgccgtggtcgatggtgcagggc
gattgcagggccggccgactggtgccggcaggcgggcggcgcatggaagtgcgcttcgaa
gtgcggctctaccggccgaagcgccgcctgggcccgctggccgaagacgtctggcgggcg
atggcttcgcgttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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