KEGG   Vibrio ruber: RND59_04475
Entry
RND59_04475       CDS       T09542                                 
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vru  Vibrio ruber
Pathway
vru02020  Two-component system
vru02024  Quorum sensing
vru05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RND59_04475 (crp)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RND59_04475 (crp)
   05111 Biofilm formation - Vibrio cholerae
    RND59_04475 (crp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vru03000]
    RND59_04475 (crp)
Transcription factors [BR:vru03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    RND59_04475 (crp)
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N RepL MarR_2 HTH_24 HTH_23 MarR HTH_11 Sigma70_r4 WHD_RecQ_mid_bact RepA_N HTH_ParB HTH_28 HTH_7 bAvd RPA_C HTH_36
Other DBs
NCBI-ProteinID: WNJ96359
Position
1:964373..965005
AA seq 210 aa
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLAGQ
MASRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq 633 nt   +upstreamnt  +downstreamnt
atggttctaggtaaacctcaaaccgatccaacattagagtggtttctttcacattgtcac
atacataaatacccttcaaagagtacgctgattcatgcaggcgaaaaagcggaaacgctt
tattacatcgtgaagggatctgttgctgttctgatcaaggatgaagaagggaaagaaatg
atcctttcttacctcaatcagggtgacttcatcggtgaacttggtttattcgaagaaggt
caagaacgaacagcttgggtcagagcgaaatctccctgcgaagttgcagaaatttccttc
aaaaagttccgtcagttaattcaggtcaatccagacattttgatgcgtctggcaggacag
atggcgagtcgccttcaagtcaccagccagaaagtcggtgatctggcttttctggatgtt
actggtcgtattgcacagacgctgttgaatctggcaaaacaacctgatgcaatgacgcat
ccggacggaatgcaaatcaagattacccgtcaggagatcggccagattgtcggctgttcg
cgcgaaaccgttggccgcattttgaaaatgctcgaagagcagaaccttatttctgcccac
ggaaaaacaatcgtcgtttacggtacgagataa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (19)   
   Pfam (19)   
All databases (20)   

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