KEGG   Vibrio mediterranei: BSZ05_09270
Entry
BSZ05_09270       CDS       T04936                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vsh  Vibrio mediterranei
Pathway
vsh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BSZ05_09270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_09270
Enzymes [BR:vsh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BSZ05_09270
DNA repair and recombination proteins [BR:vsh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BSZ05_09270
 Prokaryotic type
     BSZ05_09270
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ASI89955
Position
1:1964805..1965479
AA seq 224 aa
MTTLTWHDVIGNEKQQEYFQQTMAYVEAQRTKGKAIFPPAQDVFNAFRFTEFSDVNVVML
GQDPYHGPNQAHGLCFSVLPGVKTPPSLVNMYKELAQDIEGFEIPAHGYLKSWAEQGVLM
LNTVLTVEQGQAHSHAKLGWETFTDRVIEALNQNGEGIVFLLWGSHAQKKGKMIDRSKHH
VLTAPHPSPLSAHRGFFGSGHFSKTNQILQSMGKRPVDWQPRLD
NT seq 675 nt   +upstreamnt  +downstreamnt
atgacaacactcacatggcacgacgtaatcggtaatgaaaagcaacaagagtactttcaa
caaaccatggcgtatgttgaagcacagcgtactaaagggaaggcgattttccctcctgct
caagatgtatttaatgcatttcgatttactgagttctcggatgtgaatgtggtgatgttg
gggcaagatccctatcacggacctaatcaggctcacggactttgtttttccgtcttacca
ggcgtaaagacaccaccttctttggtcaatatgtataaagagctcgctcaagatattgag
gggtttgagatacctgcgcacggttatctgaagagctgggcagagcaaggtgtgttgatg
ttaaacacggtgttgactgtggagcaagggcaggcacattctcatgctaaattaggttgg
gagacatttactgaccgagttatagaagctttgaatcagaacggtgaaggcattgtcttc
ctgctatggggttcacatgctcaaaagaaaggtaagatgatagaccgtagtaaacatcac
gtattgactgcgcctcatccttccccactgtctgcgcacagaggcttcttcggtagcggc
cacttttctaaaacaaatcaaatacttcaaagcatgggtaagcgacctgttgattggcaa
ccacgactggattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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