KEGG   Xiphophorus couchianus (Monterrey platyfish): 114145912
Entry
114145912         CDS       T05908                                 
Name
(RefSeq) tubulin beta-4B chain-like isoform X1
  KO
K07375  tubulin beta
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145  Phagocytosis
xco04517  IgSF CAM signaling
xco04540  Gap junction
xco04814  Motor proteins
xco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    114145912
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    114145912
  09144 Cellular community - eukaryotes
   04540 Gap junction
    114145912
  09142 Cell motility
   04814 Motor proteins
    114145912
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114145912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114145912
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xco04812]
    114145912
   04147 Exosome [BR:xco04147]
    114145912
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     114145912
Cytoskeleton proteins [BR:xco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    114145912
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   114145912
  Exosomal proteins of colorectal cancer cells
   114145912
  Exosomal proteins of bladder cancer cells
   114145912
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 114145912
NCBI-ProteinID: XP_027875391
Position
6:5096450..5102263
AA seq 445 aa
MREILHLQAGQCGNQIGAKFWEVISDEHGIDPTGVYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTMQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEDMA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattcttcatcttcaagctggtcaatgtggaaaccagattggtgcgaaattc
tgggaggtaataagtgacgaacatggcattgacccaaccggggtgtaccacggagacagc
gacctgcagctcgaccggatcaacgtttattacaacgaggcatcaggtggaaaatatgtc
cctcgtgctgtgctggtcgacttggagccaggcaccatggactctgtgaggtctggacct
tttggccaagtgtttagacctgacaattttgtttttggtcagagcggcgctggaaataac
tgggctaagggtcactacaccgaaggagcagagctggtggactcggtcctggatgtggtg
agaaaggaggcagagggttgcgactgtctgcagggcttccagctcacccactccttggga
ggaggcaccggctccggtatgggcacgctcctcatcagcaagatccgagaggagtaccca
gaccgcatcatgaacacgttcagcgtggtgccgtcacccaaggtgtcggacaccgtggtg
gagccctataacgccaccctttctgtccaccagctggtggagaacactgacgagaccttc
tgcatcgacaacgaggcgctgtacgacatctgcttccgtacgttgaagctcaccacgccc
acatacggcgatctgaaccacctggtgtcggccaccatgagcggcgtcaccacctgcctg
cgcttccccggccagctgaatgcagacctgaggaagctggccgtcaacatggtgccattc
cccagactgcacttcttcatgccgggcttcgccccactgacgagccgcggcagccagcag
taccgggccctgacagtccctgaactcaccatgcagatgttcgacgccaagaacatgatg
gcggcatgtgacccgcgtcacggccgctacctgacggtggccgccatctttcgcggccgc
atgtccatgaaggaggtggacgagcagatgctgaacgttcagaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtgaagacggccgtgtgcgacatcccgccacgcggc
ctcaagatgtctgccaccttcatcggaaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcaccgccatgttccgccgcaaggccttccttcactggtacaccggc
gagggcatggatgagatggagttcaccgaggcggagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgaggaggagggcgagtttgaagaggaggga
gaagaagacatggcataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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