KEGG   Xiphias gladius (swordfish): 120784974
Entry
120784974         CDS       T07311                                 
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120784974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xgl04131]
    120784974
Membrane trafficking [BR:xgl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    120784974
SSDB
Motif
Pfam: C2 RBD-FIP DUF4635
Other DBs
NCBI-GeneID: 120784974
NCBI-ProteinID: XP_039975102
Position
LG23
AA seq 1467 aa
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTVIQVAKEKYTTGLVEKAEV
PEWNEECCFELLPGVLEEGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQAVVPLDKMFQG
GMCPRDEWFKLNSKPGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSLGQPFGEEGQGVVESRDVEIAEEKRSKMKDFFKGK
LRKSSDTRSCSSLASDSSMSSMASDNLGPPPSLDLLSDPPSSPIYTSKVRADAHYGETDL
AKKVLTSQHTTKVLTHKRAFSDEASKITTAFPRPNLAMESLKGQTMTQSKSSLCINGSHV
YDSEPSTPKSSGTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSFAEGRRWSFDKMKKEEK
EEEKEAQASSPPIQQAQTGGRPVQATMPIVSSATDSSEKGRKIRKTLFSGGRSDSLPAKS
DLHQAASASEGRLRGWFGSGDSQSKPRLEVSPKVESSSDVPPPLLSRSPIPPQRSSPSAS
PSGHVSPDDCNPFTPSSSPSSTPISPSNPFFSRMQRNPFFEELIAEELQRSPPFVPCSSS
GSSPFHYTTLPSQPYTAGPAHVVNATNMASIKRERPRPVARQISLPALLPKAAAPNSTNH
TAPRSMSESAGEWDDFFDAFASSRLSSPKGSLPQKQLRTSPPSSHRRSHPVSNSTNNDAQ
ELQTCEEQPPPLPPRRFLRTSVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREG
ECKRNSVSPDPQTNSETSDSLSVHSQAYRNINAPGFISEKKLKKFKYEPLEDDTDRWGGM
LFEQDLYGRICRGNYGQPKANCHHLSLNTEETAVKNITLKNSRPTMLFESEMSVTDLLNM
STTTSPIPDVKVLDSTSGPVEANLTETTRINNNVSFSLTLGDLNMNVSNLDFSFIDSDGS
SPSEVADTLKGINSLGEIFPQPTKDSPTAVYHEETTPEDMFTLKDTYIPGMNSSFEIPAS
SNKLCKVSPVRQDNCQDCRCELNNAAPHGYSRVNGTEVAALSSQNKTCYSSDLETESRED
KTRGDNDFKKTQRNFDDNGNPQAKPATVRQTELFSGVVSARFRPKAVSRQNSSGSPNSQS
KSGDREFEQFLSLVQNISEVNEGPLSYQPTKSALSSLLALDKQTDLQVDSTCTTLQISSK
DDTSLPTKNGVTGKPSEISFKDLHAKVAPNSRTPSKSKIEQSLHEPEASSPSIPSALTLS
TEAQAELHPTPVCCPSIHSSSRGPSAGASTPLVLAPYTSSSYSTTSTTDQPLVDARHSLL
PEETQPASNLPHQESRPHPVKPLTSSQSEKKEGRSVLEKLKSTIHPGRTAHQVVAEAEKS
QEVTVDSSAQYQHLTNMELISLLLQQDMDMQKHQAASDRQEAQLEKCEAELKKVKAQVRD
LEDYIDNLLLRIMEQTPTLLQVRTRHK
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgatgtcactgatagacctggacgacgaccagcggtgggtgcccactcacgtgaacgtc
accgtcctccgcgcaaggggactgcgaaccaagggcaagcacggcagccgctacctctac
accgtcatccaggtggcgaaggagaagtacaccaccgggctggtggagaaggccgaggtg
cccgagtggaacgaggaatgctgcttcgagctgctccccggcgtcctggaggagggcggc
cggagcgcctaccccccggggagcggggacctggtcctcacggtcatgcaccgggtgctc
atcgggctggacgtctttctcggccaagccgtcgttcctctggataagatgttccagggt
ggaatgtgtcccagagacgaatggttcaagctcaactccaagccaggacgaaaggagaag
gaacgtggtgaacttcaggtgacagtgcagttcacccgcaacaacatgaccgccagtatg
tttgacctcaccatgaaggacaaacctcgctctgcttttggcaagctcaaggatcgcgtc
acaggcaggaagaggggggacgtggagtcttcctcggccattgtgccaggccgctacgcc
gccctgtcggggtccctggggcagccgttcggagaggagggccaaggggtcgtagagtcg
agagatgtggagatagcagaggagaagaggagcaagatgaaagatttcttcaaaggaaag
ctgcgcaagtcgtctgacaccaggtcatgctcgtcgctggcttcagatagtagtatgtct
tccatggccagtgacaacctcggccctccacccagtctggatctgctttcagaccctccc
agctcccccatctacactagcaaagtgagagcggacgcccactatggagagacagattta
gctaaaaaagtgctcaccagccagcacaccacaaaggttctcacacacaagcgagccttc
agcgatgaagctagcaagatcacaacagccttccctcgaccaaatcttgcaatggagtct
ctcaagggtcagaccatgactcagtccaagtcttccttgtgtataaatggaagccatgtc
tacgactctgagccatcgactccaaagagctcaggtaccctcccttccaagctggtcctg
ctggagaaatgttccccgctctctcggtccctgcagaacctcaccaagagaagtgaggac
aaaggttcctttgccgagggccgccgctggtccttcgacaagatgaagaaagaggaaaag
gaggaagaaaaggaagctcaggcatcgtctcctccgattcagcaagctcagacagggggt
cgccccgtacaggcaacgatgccgatcgtgtcctctgctactgattcatctgaaaaaggg
aggaagataagaaaaacgttattctctggagggaggagtgattctctcccagctaagtca
gacctgcaccaggctgcttcagcatctgaggggaggctcagaggctggtttggctccggg
gactcccagagcaagccaaggctggaagtttctcctaaggtagaaagcagctcagatgta
ccccctcccctcctttctcgctcccctatcccccctcagcgctcctctccctctgcctcc
ccctccggtcatgtctcacctgacgactgcaatcccttcaccccctcttcctctccctcc
tcaactcctatatccccctccaacccattcttctcacgtatgcagcgcaaccccttcttt
gaggagctcatagctgaagagttgcagaggtcccctccttttgtgccttgctcctcttct
ggctcgtccccctttcattacaccactctgccctcccagccctacacagccggccctgct
catgttgttaatgctacaaatatggcttccataaagcgggagcgccccaggccagtagcc
agacagatatctctccctgcattattacccaaagcagccgcaccaaactccactaaccac
acagccccccgctccatgtcagagagtgcaggagaatgggatgacttttttgatgctttt
gcctctagcaggctcagctcgcctaaagggagtcttcctcagaaacagcttagaaccagt
ccaccctcatctcatagacgtagtcatccagttagtaacagtaccaataatgacgcacaa
gagttgcaaacatgtgaagagcagcctccgcctttgcctccaaggagatttttaagaaca
tcagtgaatgagatttattctgatggctggctacacagaggtcaggagctagctgtccat
aaagaagcctacctcctctcacagactggcgtggcctcactacaacgcggcagagaaggt
gaatgcaaaagaaacagtgtatctccagacccacagacgaacagcgagacctctgactcc
ctcagtgtccactcccaggcttacagaaacattaatgccccaggattcatctctgaaaaa
aagctcaaaaagttcaaatatgaacctttggaggatgacactgaccgctggggagggatg
ttgtttgagcaagacttgtatggacgcatatgtagaggaaactatggacaacccaaagca
aactgtcatcatttgtcattgaacactgaggagactgctgtaaagaacatcacattaaag
aactcaagacctacaatgctttttgaaagtgagatgtcagttacagaccttttgaacatg
tcaactactacttcccctatcccagacgtaaaggtactggatagtacttctggtccagta
gaggctaatctaactgaaaccacacgcatcaacaataacgtgtctttctcactaacttta
ggagacctgaacatgaatgtgagtaatttagactttagtttcattgattcggacggctcc
tctccatcagaggtagccgatactctcaaaggcatcaacagtttaggcgagattttccca
caaccgacaaaagactcaccaacagccgtttaccacgaggagaccacacctgaggatatg
ttcactttaaaggacacctacatacctgggatgaactcttcatttgaaatacctgcctct
tcgaataaactgtgcaaagtgtctccagttcgccaagacaattgccaggattgtcgatgt
gagctgaataacgcggcaccacacggttactcaagggtaaacgggacggaggtcgctgcg
ttgtcgtctcaaaataaaacatgttattcatccgatcttgaaactgaatccagagaagat
aaaacaaggggtgacaatgattttaaaaagacacaaaggaactttgatgataatggcaat
ccacaagctaagccagccacagtgaggcagacagagttgttttctggggtggttagtgca
cgttttagaccaaaagcagtgtcccgacagaacagcagtggcagcccaaacagccaaagc
aaaagcggagacagagagtttgaacagtttctgtcccttgttcaaaacatttcagaagtc
aatgaaggaccattgtcgtatcagcccactaaatcagctctttcttccttgctggcgtta
gataaacagacagatttgcaagttgatagcacctgtacaacattgcaaatatcctcaaaa
gacgacacgtctcttcccacaaaaaacggtgtaactggaaaaccttctgagatcagtttc
aaagacctccacgcaaaagttgcaccgaactcgagaaccccttcgaagtcaaagattgag
caatctttgcacgagcctgaagcctcttctccctccatcccctctgcactcaccttgtcc
actgaggcacaggccgagctccaccctacccccgtctgttgcccctccatacattcctcg
agcagggggcccagtgctggagccagcactcctctggttctggccccctacacctcctcc
tcctactctaccacctccaccactgaccagcccctggtcgatgcacggcactcacttttg
cctgaggagacacagccagctagcaacctgccccatcaggagagcagacctcatccagtg
aagccattaacctccagccaatcagagaagaaggagggtcgttcggttctggagaagctc
aagtccacaatccaccctgggcgcaccgcccaccaggtcgtagctgaagctgagaagagt
caggaggtgaccgtcgacagctctgctcagtaccagcacctgaccaacatggagctgatc
tccctgctgctgcagcaagatatggacatgcagaagcaccaggcggcctcggatcggcag
gaggcgcagctggagaaatgcgaggccgagctgaaaaaggtcaaggcgcaggttcgagac
ctggaggactacatcgataatcttttgctgcggatcatggagcagacacccacgctgctt
caagtgcgaaccagacacaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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