KEGG T07311: 120801907

Xiphias gladius (swordfish): 120801907

Entry

120801907         CDS       T07311

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

xgl Xiphias gladius (swordfish)

Brite

KEGG Orthology (KO) [BR:xgl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120801907
Spliceosome [BR:xgl03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120801907
Complex C
   U4/U6.U5 tri-SnRNP related factors
    120801907

SSDB

Motif

Pfam:

MA3 MIF4G Cnd1

Other DBs

NCBI-GeneID:

120801907

NCBI-ProteinID:

XP_040005173

Position

LG16

AA seq 1020 aa
MDSPGRNQSPSPAQREHSGSSENESSPAAERPQQASSVERSPKDRPSPQASPAGRSPSGS
PASSSSDDSSSSSSSSSDDEDKHHGALRKIRSSVAQIKRSRSRSREQDRSRSRERERSRS
RSRSRGQDTSRSKSREQDKSRSRERDRSRERNGSRSRERDRSRSRERDRSRSRERDRSRS
RGRDRSRSRGRERSRSRGRDRSRSRERDRDRERYDRGRYARDRYDDRRDDRNGRFDRRTN
RDAEPDHRRRGRSVSPPTDREPMAADEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQQQ
ITDKSSLAYQRMSWEALKKSINGLINKVNVSNIVNIIQELLQENIVRGRGLLARSVLQAQ
AASPIFTHVYAAVVAIINSKFPQIGELILKRLILTFRRSYRRNLKQQCLTASKFVAHLIN
QNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNVLHE
STIDKRVQYMIEVMFAIRKDGFKDHPVVPDGLDLVDEDDQFTHMLPLDDEYNTEDILNVF
KMDPDFLENEEKYKTIKKDILDEGSSDSGEEGDGSDEDEDDEDENEEGGEDEKVTILDKT
EVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEKFFG
LLAGRFCLLKKEYMESFEGIFSEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVLECI
RMSEETTTSSSRIFVKILFQELCAYMGLPKLNQRLKDPTLQPFFEGLFPRDNPRNTRFAI
NFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSSSSDSSSSDSSSES
DSDSSDSDSSSSSSSSSSSDSDTKQRKKKKRKEQSEEKKKKKEKDKKKKKEKPTDKKRTK
HKNDDDGEYDSNDEKQARRDGKGRAREVEERERAREGARRSRRDERAEEEEQYKEEERRR
KMDVEGRQRDGERERERDRGRERERERAREREYEEKRERERERNKENRDRNREREERRRR

NT seq 3063 nt +upstreamnt +downstreamnt
atggactctccaggcagaaatcaaagtcccagtcctgcgcagagagaacacagtggatct
tcagagaacgagtccagtccagcagcagagaggccccaacaggccagctcggtcgagaga
agccccaaagacaggccgtcccctcaggccagtcctgcaggccgcagcccttctgggagc
cccgcctctagcagctcagacgacagcagcagcagcagcagcagcagcagtgatgatgag
gataaacatcacggggcactgaggaagattaggagcagcgtggcccagatcaaaagatcc
aggtccaggtccagagagcaagacagatccaggtctagagagagagagagatccagatcc
agatctagatccagggggcaagacacatccaggtccaaatccagagaacaagacaaatcc
aggtccagagagagggacagatcccgggaaagaaacggatcaagatcccgggaaagagac
agatcaagatcccgggaaagagacagatcaagatcccgggaaagagacagatcaagatcc
agaggaagagacagatcaagatccagaggaagagagagatccaggtccaggggacgagac
agatccaggtccagagagagggaccgggaccgggagcgctatgacagaggacgctatgct
agagatcgctatgacgatcgtcgtgacgacaggaacgggcgttttgaccggcgtaccaat
cgggatgcagagccagatcacaggaggcgcggccgctccgtttcccctccgacagacagg
gagccgatggcggccgacgagccgccggtaaagaagaagaaggaggagctcgacccgatc
ctgacgaggaccggcggcgcttacatcccccccgccaagctgcgcatgatgcagcagcaa
atcactgacaagagcagcctggcctatcagaggatgagctgggaggctctgaagaagtcc
atcaatggtttgatcaacaaagtcaacgtgtccaacatcgtcaacatcatccaggagctg
ctgcaggagaacatcgtcagggggaggggtctgctggctcgctcagtgcttcaggctcag
gcagcttctccgatcttcactcacgtttatgccgctgtcgttgccatcatcaactctaaa
ttccctcagattggagagctgatcctcaaacgcctcatcctgaccttcaggcggagctat
cgccgtaacctcaagcaacagtgcctaacagcctcaaagtttgtggctcacctcatcaac
cagaatgtggcccatgaggttttgtgtctggagatgctcacactgctgctggagcgaccc
actgacgacagcgtggaggtcgccatctccttcctgaaggagtgtggactcaaactgact
gaggtctccccccgaggaataaacgccatatttgagcgtctcaggaacgtcctccacgag
tcgaccatcgataagagggtccagtacatgattgaggtgatgtttgccatcaggaaggac
ggtttcaaagatcatccagtggtcccagacggcctggacctggtggacgaggatgaccag
ttcactcacatgctgccgctggatgacgagtacaacaccgaggacatccttaatgtgttt
aagatggacccagacttcctggagaacgaggagaaatacaaaaccattaaaaaagatatc
ctggacgagggcagcagcgattcgggggaggagggagatggcagcgatgaagatgaagac
gatgaagatgagaacgaggaggggggagaagatgagaaggtcaccatcttggataagaca
gaagtcaacctggttgctttcagaagaaccatctacctcgctattcagtccagtttggac
ttcgaggagtgcgcccacaaactgatcaagatggactttcctgagagccagacgaaggag
ctgtgtaacatgatcctggactgctgcgcacaacagagaacctacgaaaagttctttggt
ctgctggccgggaggttctgtctgctgaagaaggagtacatggagagttttgaggggatt
ttttcagagcagtacgacacgattcaccgactggaaaccaacaaactgaggaacgtggcc
cgactgtttgctcacctgctctacacagactctgttccatggagtgtgttggagtgtatc
aggatgagtgaggagaccacgacgtcgtccagcaggatctttgtgaagatccttttccag
gagctctgtgcctacatgggcctccccaaactcaaccagaggctcaaagacccgactctg
cagcccttctttgaaggtctgtttcctcgtgataatcccagaaacactcgcttcgccatc
aacttcttcacctctattggactgggaggactgacggacgagttgagggaacatctgaaa
aacgctccaaagatgatcatgactcagaaccaagaagtggaatcctctgactcctcctcg
tcctcttcatcctcctcttcgtcatcggattcctcctcctcagactcctctagtgaatca
gattcagactcctcagactcggactcctccagcagcagcagcagcagcagcagctcagac
tcagacaccaaacagcggaagaagaagaagagaaaagaacaaagtgaggagaagaagaag
aagaaagagaaggacaagaagaagaagaaggaaaaacccactgacaagaagcgaaccaaa
cacaagaatgatgatgacggggaatatgacagtaatgacgagaagcaggcgaggagggac
gggaaaggccgtgcacgtgaggtggaggagcgtgagcgtgcacgtgagggcgcccgccgg
agcagacgagacgaaagagcagaagaagaagagcaatacaaagaggaggagaggaggcga
aaaatggacgttgaaggcaggcaaagagacggcgagagggagagagagagagacaggggg
agggaaagagagcgagaacgagcgagggagcgagagtatgaggagaagagagagagggag
agagagaggaataaagagaacagagacaggaacagagagagagaggagaggaggaggaga
taa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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