KEGG   Xiphophorus hellerii (green swordtail): 116712793
Entry
116712793         CDS       T07363                                 
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
  KO
K14571  ribosome biogenesis ATPase
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116712793 (nvl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xhe03009]
    116712793 (nvl)
Ribosome biogenesis [BR:xhe03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    116712793 (nvl)
SSDB
Motif
Pfam: AAA Nucleolin_bd AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_2 AAA_14 AAA_22 AAA_33 NPHP3_N TIP49 AAA_28 Mg_chelatase RNA_helicase AAA_17 nSTAND3 Rad17 ATPase AAA_18 TsaE NACHT Viral_helicase1 ABC_tran Cytidylate_kin2 IstB_IS21 Zeta_toxin AAA_3 Vps4_C AAA_19 Sigma54_activ_2
Other DBs
NCBI-GeneID: 116712793
NCBI-ProteinID: XP_032408520
Position
22:complement(26858167..26881869)
AA seq 815 aa
MKNRGGGWLDSRLKQRVKQYLASSSSEYVDLVEMALDLQKQYRVEYGRRNRTAFRIQVEK
VYDAVKEDSDLNDLESKHLAKRARSSCNETGDGSSSDESSGNDQQVLGNTPNSSVTALYH
KGPPAASRTNPAPDEGTLVSPGGWFIDKGRGPATKPVFIDLSKDESVDTESNRGASHLEP
ETSQKKSKKRAKSSAEYRSADKKAKSKSPELQFPSLRFEDVGGNEEILTEVCKLLVHMRH
PEVYQHLGMVPPRGFLLHGPPGCGKTLLAQAVAGELQIPMLKVSAPELVSGVSGESEQKL
RELFDMAATSSPCIMFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLTVTAQVLV
IGATNRPDSLDPALRRAGRFDREICLGIPDEAARLGILKTLCRKLTLPDGFDYQQLARLT
PGYVGADLMALCREAAMAAVNRVLLETRPAPPGPPQNSAAEPSGSTEPEAGGEEQQVEPG
ELGRLLDLLRATETLTEQQLAGLSILMSDFRDALVRVQPSAKREGFATVPDVTWENVGAL
QNIREELTMAILAPVRSPEQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISV
KGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLL
TEMDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPCAADRHAILLTVTKGGT
RPQLEPDVRLEEVAFDERCNSFSGADLTALVREASVNALKAYMKSQHHAHTHPAGCAAAL
RVSRQNFEDAFKTVRPSVSRKDQLMYEQLRESLSR
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgaagaaccgaggcggaggctggctggactctcgacttaaacaaagagtgaagcagtac
ctggcctccagcagcagtgaatatgttgacctggtagagatggccctggaccttcaaaaa
cagtacagagtggagtatggcagaaggaacaggacggcgttcaggatccaggtggagaaa
gtgtacgatgcagtgaaagaggactcggacctgaacgacctggagagcaaacacctggct
aagagagccaggagcagctgcaacgaaactggggacggcagcagctcagacgagtcgtca
ggaaacgatcaacaggttctgggcaacacgcccaacagctctgtcacggccctgtaccat
aagggccctccggcagccagcaggaccaacccagctccagatgaagggaccctggtttcc
cccggaggctggttcatcgataagggccgaggccccgccaccaagcctgtcttcatcgac
ctcagtaaagacgagtcggtcgatacggaatccaacagaggcgcgtcccacctggagccg
gagacgagtcagaagaagtcaaagaaaagggcaaagagctcggccgagtatcgcagcgcg
gacaagaaagccaagtccaagtctccagagctgcagttcccctctctgaggtttgaggat
gtgggcgggaatgaggagatcctgacggaggtgtgcaagctgctggtccatatgcgccac
cctgaggtgtaccagcatctggggatggttcctcccaggggcttcctcctgcacgggccc
cccggctgtggaaagaccctgctggcccaggctgtggctggagagctgcagatccccatg
ctgaaggtgtccgctccagagctggtgtccggcgtctccggagagtcggagcagaagctg
agggagctgttcgacatggccgcgacctccagtccatgcatcatgttcatagatgagata
gacgccatcacgcctaaaagagaggtggcttctaaagacatggagcggaggatcgtagcc
caactgctgacctgcatggacgacctcaacagcctgacagtgacggctcaggttctggtg
atcggcgccaccaacagacccgactcattggacccggccctgcggagagccggacgcttc
gacagagagatctgcctggggatccccgacgaggccgctcggctcgggatcctcaagacg
ctgtgcaggaagctgacgctgccggacggcttcgactaccagcagctggctcggctgacg
ccgggctacgtgggcgccgacctcatggctctgtgccgggaggccgccatggccgcggtg
aaccgggttctgctggaaaccaggccggcgcctcccggtccgccacagaactctgctgca
gaaccgtcaggaagcacggagcctgaggctggaggggaagagcagcaggtagagccgggg
gaactgggtcggctcctggacctgctgagggccacggagacgctgacggagcagcagctg
gccggcctgtccatcctcatgtccgacttccgggacgcgctggtccgggtccagccctcg
gccaagagggagggcttcgccacggtgccggacgtcacctgggagaacgttggagcgctg
cagaacatcagggaggagctgaccatggccatactggctccagtccgctccccagagcag
ttcagggctctgggcctcagcgctccgtctggggtcctgctggctggacccccaggctgt
gggaagaccctgctggccaaggctgtggccaacgagtcaggcctcaacttcatctcagtg
aaaggtccagagctgctcaacatgtacgtgggggagagcgagcgggccgtgcgacaggtc
ttccagagaggacgcaactcggctccttgcgtcatcttcttcgatgagatcgacgctctg
tgtcctcgccggtcgggccacgagtcaggagccagtgtgcgggtcgttaatcagctgctg
acggagatggatggcctggagacacggagacaggtcttcatcatggctgccaccaacagg
ccggatatcatcgacccggccgtcctgaggccagggcgtctagataaaaccttatatgtt
gggctcccgtgtgcggcagatcgtcacgccatcctgctcaccgtcactaagggtggcacc
aggcctcagctggagccggacgtccgtctggaggaggttgcctttgacgaacgctgcaac
tccttttctggagctgacctgacggcgttggtgagggaagcatctgtaaatgccttgaag
gcctacatgaagtctcagcaccatgctcacacgcatcctgccggctgcgcagctgccctc
agggtcagcagacagaactttgaggacgccttcaagaccgtccgaccgtctgtgtccaga
aaggaccagctgatgtatgagcagctccgagagtccctcagcagatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (31)   
   Pfam (31)   
All databases (39)   

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