KEGG   Xiphophorus maculatus (southern platyfish): 102218463
Entry
102218463         CDS       T02923                                 
Symbol
psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03050  Proteasome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102218463 (psmc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:xma03051]
    102218463 (psmc6)
Proteasome [BR:xma03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     102218463 (psmc6)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_16 AAA_5 AAA_22 AAA_2 RuvB_N PRS7_OB AAA_lid_PRS2_C nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_7 AAA_33 AAA_11 TIP49 RNA_helicase AAA_18 AAA_3 Csa3_N NPHP3_N Mg_chelatase AAA_24 bpMoxR AAA_28 DUF5906 TsaE NACHT AAA_25 AAA_17 ATPase DUF3829_2nd Parvo_NS1 IstB_IS21 ATPase_2 GAS Phage_GP20
Other DBs
NCBI-GeneID: 102218463
NCBI-ProteinID: XP_005806089
Ensembl: ENSXMAG00000005307
UniProt: M3ZSZ4
Position
15:complement(22893969..22903833)
AA seq 389 aa
MADTRDKALQDYRKKLLEHKEVDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSQLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHSSPITKHGEIDFEAIVKLSDGFNGADLRNVCTEAGLFAIRSDRE
YVTQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcggacacgagagataaagctttgcaagactacaggaaaaaattactagaacataag
gaggttgacggacgattgaaagaattaagagaacagctgagggaacaaacgaagcaatac
gagaagtcagagaatgacttaaaggctcttcaaagtgttggtcagattgttggagaggtg
ctaaagcagcttacagaagagaaattcattgtgaaagccaccaacggtccccgatatgtg
gttggatgtcgcagacagttggacaaatcacagctgaagcctggcaccagagtggctttg
gacatgactacactcactataatgaggtacctacccagggaagtggatcctctagtgtac
aacatgtcccatgaagatccaggcagcgtctcctactctgaaattggaggactgtctgaa
cagatccgtgaactgagagaggtgattgaacttcctctgaccaaccctgagctctttcag
agagtgggaattattcctccaaaaggttgcctgctttatgggcctccaggcactgggaag
actctacttgccagggccgtggccagtcagttggattgcaactttctaaaggttgtgtcc
agctccattgtggacaaatacatcggtgaaagtgcaaggctcattagagagatgttcaac
tatgcccgggaccaccagccatgcatcatcttcatggacgagattgatgccattggtggc
cgccgtttctcagaaggtacttcagctgatagagagatccaaagaactctgatggagctg
ctgaaccagatggacggttttgatactctacacagagtcaagatgatcatggccaccaac
aggccggacaccctggacccagcgctgctgcggcctggaagactggaccggaaaatacac
attgagctgccaaatgaacaagctcgactggacatcctcaaaatccactccagtcccatc
accaagcatggcgaaatagattttgaagccattgtaaaactgtctgatggtttcaatggt
gctgatctaagaaacgtgtgcactgaagcaggactgtttgcgatccggtctgatcgtgag
tacgtcactcaagaagacttcatgaaagctgttcgcaaagtggccgactcaaagaagctc
gagtccaagttggactacaaacctgtttaa

  All links  
Gene (70)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (112)   

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