KEGG   Xiphophorus maculatus (southern platyfish): 102228734
Entry
102228734         CDS       T02923                                 
Symbol
tubb4b
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04145  Phagocytosis
xma04517  IgSF CAM signaling
xma04540  Gap junction
xma04814  Motor proteins
xma05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    102228734 (tubb4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    102228734 (tubb4b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    102228734 (tubb4b)
  09142 Cell motility
   04814 Motor proteins
    102228734 (tubb4b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102228734 (tubb4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xma03036]
    102228734 (tubb4b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xma04812]
    102228734 (tubb4b)
   04147 Exosome [BR:xma04147]
    102228734 (tubb4b)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     102228734 (tubb4b)
Cytoskeleton proteins [BR:xma04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    102228734 (tubb4b)
Exosome [BR:xma04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102228734 (tubb4b)
  Exosomal proteins of colorectal cancer cells
   102228734 (tubb4b)
  Exosomal proteins of bladder cancer cells
   102228734 (tubb4b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 102228734
NCBI-ProteinID: XP_005807442
Ensembl: ENSXMAG00000003936
UniProt: M3ZNZ6
Position
11:complement(1042052..1044494)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEDLA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgtgcatcttcaggctggccagtgcggaaaccaaattggtgccaagttc
tgggaagtcatcagtgacgaacatggcattgacccaactggtacttatcatggagacagt
gacctgcagttggacaggatcaatgtctactacaatgaagcttctggtggaaagtatgtg
ccacgtgccgtgcttgtggatctggagccaggaactatggactctgtgaggtctggaccc
ttcggccaggtcttcaggccagacaactttgtttttggtcagagtggtgctggcaacaac
tgggccaaaggccactatacagaaggcgccgagctggtggactccgtcctggatgtggtc
aggaaggaggctgaaagctgtgactgcctgcagggattccagctcacacactccctcggt
ggtggtacaggctctggcatgggtaccctgctgatcagcaagatccgtgaagagtaccct
gaccgcatcatgaacaccttcagtgtagttccttcccctaaagtgtccgacacagtcgtc
gagccctacaacgccacattatcagtccatcagcttgtagagaacacggatgaaacctat
tgcattgacaacgaggccctgtatgacatctgtttccgcacactcaaactcacaaccccc
tcatatggtgacctcaaccacttggtctctgccaccatgagtggtgtcacaacctgcctg
aggttccctggacagctcaatgctgacctgcgcaagctggctgtgaacatggtgccattc
ccacgtctgcacttcttcatgccaggttttgctccccttaccagcagaggcagccagcag
tacagatcactcacagtacctgagctcacccagcagatgttcgacgccaagaacatgatg
gctgcctgcgacccgcgccatggccgctacttgactgtggctgccatcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctcaatgtccaaaacaagaacagcagttac
tttgtagaatggatcccaaacaatgtcaagactgcagtctgtgacattcctcctcgtggg
ctcaaaatggctgccacattcatcggcaacagcacagccatccaagagctgttcaagcgc
atctctgagcagttcacagctatgttcaggcgcaaagctttcctccactggtacaccggt
gagggtatggatgagatggagttcactgaggcagagagcaacatgaatgacctggtgtct
gagtatcagcagtaccaggatgccactgctgaggaggagggagagtttgaggaagagggt
gaagaagatttggcctaa

  All links  
Gene (724)   
   RefGene (720)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (732)   

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