KEGG T10866: AB3X08

Xanthomonas tesorieronis: AB3X08_19170

Entry

AB3X08_19170      CDS       T10866

Name

(GenBank) UdgX family uracil-DNA binding protein

K21929

uracil-DNA glycosylase [EC:3.2.2.27]

Organism

xts Xanthomonas tesorieronis

Pathway

xts03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:xts00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AB3X08_19170
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xts03400]
    AB3X08_19170
Enzymes [BR:xts01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AB3X08_19170
DNA repair and recombination proteins [BR:xts03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AB3X08_19170

SSDB

Motif

Pfam:

DUF4130 UDG DUF2026

Other DBs

NCBI-ProteinID:

XEA99229

Position

complement(4498084..4499532)

AA seq 482 aa
MFRAEVVPGWSLEAWRVAARAAWCAQVAPESVLWEGDAQGGLLAGTDVVGLPATVAAPRV
SAEFLALAGAALCHRDPQRHALLYRLLWRIGSGERALLQQATDADMHRAQQWAQAVRRDS
HKMKAFVRFREVPGEEEAFVAWFEPEHHIVDRIAPFFARRFAGMRWAILTPYRSVRWDGA
ALQFGAGAQRADAPADDAQDALWRTYYANIFNPARLNPDMMRQEMPQKYWKNLPETQLLP
GLIRDAGQRVREMAERAPEPVRRRIPAPPPPAAIEADDSLDALRAAARECRRCPLWQPAT
QTVFGEGPRDAAVMVVGEQPGDEEDLSGRPFVGPAGRLFDRALHELGIARAGLYVTNAVK
HFRFEQRGKARLHRNPERAQVEACRFWLAGELARVRPRVVLCLGATAARAVLGNGFALMA
QRGQWQALADGSRALATVHPSWVLRQRGGEAGAAAYRGFVDDLRRLAQAGETPRVVNPDS
GR

NT seq 1449 nt +upstreamnt +downstreamnt
gtgtttcgggctgaggtggtgccggggtggagtctggaggcgtggcgggtggcggcgcgg
gcggcgtggtgtgcgcaggtggcgccggagtcggtgctctgggagggggatgcgcagggt
gggttgctggccgggaccgatgtggttgggttgccggctacggtggcggcgccgcgggtt
tcggcggagttcctggcgttggcgggggcggcgctgtgccatcgcgatccgcagcggcat
gcgttgctgtatcggttgttgtggcggatcgggtcgggcgagcgtgcgctgttgcagcag
gccaccgatgccgatatgcaccgggcgcagcagtgggcgcaggcggtgcgccgcgacagc
cacaagatgaaggcgttcgtgcgtttccgcgaggtgccgggcgaggaggaggcgttcgtc
gcctggttcgagccggaacaccacatcgtcgatcgcatcgcgccgttcttcgcgcgccgt
ttcgccggcatgcgctgggcgatcctgaccccgtaccgcagcgtgcgctgggacggtgcg
gcgctgcagttcggcgccggcgcgcagcgcgccgatgcgccggccgacgatgcgcaggat
gcgctgtggcgcacctactacgccaacatcttcaatccggcgcggctcaacccggacatg
atgcgtcaggagatgccgcagaagtactggaagaacctgccggagacgcagctgctgccg
ggcctgatccgcgatgccgggcagcgcgtgcgcgagatggccgagcgcgcgccggagccg
gtgcgccggcgcattcccgcgccgccgccgccggccgcgatcgaggccgatgacagcctc
gatgcgctgcgcgcggcggcgcgcgagtgccggcgttgcccgctgtggcagccggccacg
cagaccgtgttcggcgagggaccgcgcgatgcggcggtgatggtggtgggcgagcagccc
ggcgacgaggaggacctgagcgggcggccgttcgtcggcccggccgggcgcctgttcgat
cgcgcgctgcacgaactcggcatcgcccgcgccgggctgtacgtgaccaatgcggtcaag
catttccgcttcgagcaacgcggcaaggcgcggctgcaccgcaacccggaacgtgcgcag
gtggaggcctgccgcttctggctggccggcgaactggcgcgggtgcgcccgcgcgtggtg
ctgtgcctgggcgccaccgccgcgcgcgcggtgctcggcaacggctttgcgctgatggcg
cagcgcgggcagtggcaggcgctggccgacggcagccgcgcgctcgccaccgtgcatccg
tcgtgggtgctgcgccagcgcggcggcgaggccggtgcggcggcctatcgtggcttcgtc
gatgatctgcgccggctggcgcaggccggggagacgccgcgcgtcgtgaatccggactcg
ggccgctga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (4)   

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