KEGG   Yersinia pestis D106004: YPD4_1834
Entry
YPD4_1834         CDS       T01832                                 
Name
(GenBank) long-chain-fatty-acid-CoA ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ypd  Yersinia pestis D106004
Pathway
ypd00061  Fatty acid biosynthesis
ypd00071  Fatty acid degradation
ypd01100  Metabolic pathways
ypd01212  Fatty acid metabolism
ypd02024  Quorum sensing
ypd04146  Peroxisome
Module
ypd_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    YPD4_1834
   00071 Fatty acid degradation
    YPD4_1834
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    YPD4_1834
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YPD4_1834
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ypd01004]
    YPD4_1834
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ypd04147]
    YPD4_1834
Enzymes [BR:ypd01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     YPD4_1834
Lipid biosynthesis proteins [BR:ypd01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   YPD4_1834
Exosome [BR:ypd04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   YPD4_1834
  Exosomal proteins of breast cancer cells
   YPD4_1834
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ACY58742
Position
2351344..2353083
AA seq 579 aa
MNLRFTMATNNNFRSVTLEKVWLKRYPADVPAEIDPDRYSSLIEMFENAALRYADQPAFI
NMGEVMTFRKLEERSRAFAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGVLRAGMIVVN
VNPLYTPRELEHQLSDSGAVAIVIVSNFAHTLEKVVFKTQVRHVILTRMGDQLSAAKGTL
VNFVVKYIKRLVPKYYLPDAISFRTVLQKGRRMQYVKPDVINTDTAFLQYTGGTTGVAKG
AILTHRNMQSNLEQAKAAYAPLLQPGRDLVVTALPLYHIFALTVNCLLFIELGGRSLLIT
NPRDIPGMVKELSRYPFTAITGVNTLFNALLNNEEFTHLDFSTLRLSVGGGMPVQKAVAE
KWETLTGKHLLEGYGLTECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLRDDDGNDVELGK
PGELWVRGPQVMLGYWQRPDATDDVLKDGWLATGDIATMDEDGFLRIVDRKKDMILVSGF
NVYPNEIEEVVALHAKVLESAVIGVPNEVSGEAVKVFVVKNDASLTPEELLTHCRRYLTG
YKVPKIVEFRDELPKSNVGKILRRELRDEEVKVGTTDAA
NT seq 1740 nt   +upstreamnt  +downstreamnt
gtgaatttgcgttttaccatggcgaccaataataattttaggagtgttaccttggaaaaa
gtatggctaaagcgctatccggcagatgtccccgcagagattgatccggaccgctattca
tctttgatagaaatgtttgagaacgcggcgttgcgttatgcggaccaacccgcatttatt
aatatgggcgaggtcatgacttttcgtaagctggaagagcgcagccgtgcttttgctgcc
tatctacagcaaggtctggggttacagaaaggtgaccgtgttgcactgatgatgccaaat
ttactgcaatatcctatcgctttgtttggtgttctgcgggcaggtatgattgtcgtgaat
gttaatccgctgtataccccgcgtgaacttgagcatcaacttagtgatagcggagccgtg
gccatcgttattgtttccaacttcgcccacacactggaaaaagttgtctttaaaacccag
gtccggcatgtgattttgacccgaatgggtgatcaactctcggcagcaaaagggacgttg
gttaacttcgtggtgaaatacattaagcgtctggtgccgaagtactatctgcccgatgcc
atttcatttcgtaccgtattgcaaaaagggcgtcgaatgcaatacgtcaaaccggatgtt
atcaacacggatacggcattcttgcaatataccggcgggactacgggtgtcgcgaaaggt
gccatattgacacaccgcaacatgcaatcaaatctggaacaggcaaaagcggcctatgca
ccgttgcttcaacctggccgtgatttggtggtcacggctctgcctctctaccatatcttt
gcattgacggtaaattgcctgctatttatcgagttgggggggcgcagtttattgataacc
aacccacgagatatccccggtatggttaaagaactgagtcgttatccatttaccgcgata
acaggggtcaatacgttatttaatgcattattgaataatgaagagtttacccatttggat
ttctccaccttgcgcctttcggtgggcggcggtatgccagtgcagaaagccgtggccgaa
aagtgggaaacgctgacgggtaagcatctactggagggttacggtttgactgaatgctca
cctttagttaccggtaacccttatgatctgaaacattacagcggcagtattggtttaccg
gtaccttcgacagatgttcggctgcgcgatgatgatggcaatgacgtagaattaggcaag
ccgggtgaactatgggtgcgtgggccacaagttatgttaggctattggcagcggccagat
gccacggatgacgtcctgaaagacggctggctggcgacaggtgatattgcgacgatggat
gaggacggtttcttgcgcatcgttgaccgtaagaaggacatgattctggtttctggtttt
aacgtctaccccaatgagattgaagaggtggtagcgttacatgcgaaagtgctggagtct
gctgtgattggcgtgcctaatgaggtctccggcgaggcagtaaaagtctttgttgttaaa
aatgatgcatcactgacacctgaagaattactaacgcattgccgtcgctaccttaccggg
tataaagtaccgaaaattgtagagttccgtgacgaattgccgaagtcgaatgtgggtaaa
atattgcgcagggaactacgtgacgaagaagttaaggtgggtacgacagacgcagcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (4)   

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