KEGG   Yersinia pseudotuberculosis ATCC 6904: DJ40_1596
Entry
DJ40_1596         CDS       T03307                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
ypq  Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:ypq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ypq03021]
    DJ40_1596 (rpoS)
Transcription machinery [BR:ypq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DJ40_1596 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AIN16445
Position
complement(1742081..1743079)
AA seq 332 aa
MSQSTLKVNELHEDADFDENSTETEIFDEKALVDDEPTESELADDELLAQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRILRLNERITSVDTPLGGDSEKALLDIL
SDENENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQTQGLSIEALFRE
NT seq 999 nt   +upstreamnt  +downstreamnt
atgagccaaagtacgctgaaagttaacgagttgcatgaagatgctgattttgatgagaac
agtacggaaactgagatttttgatgaaaaagcattagtagatgatgaacctactgaaagc
gagttagcagacgatgagttgttggcgcaaggtgttacccagcgtgtgctggatgcgacg
caactctatcttggtgaaatcggttattcgccactgctaacggccgaagaagaggtttat
tttgcccggcgtgcattgcgcggagacgtaccttcacgtcgacgtatgattgagagtaac
ttgcggctggtggtgaagatcgcccgccgttacagtaatcgcggtttagcgctgttggat
ctgatagaagagggtaacctcggtttgatccgtgcggtggaaaagtttgatcctgaacgc
ggtttccgtttttccacttacgcgacttggtggattcgccagacgattgaacgggcgatt
atgaaccaaacccgtaccatccgtttgcctatccatatcgttaaagagttaaacgtttat
ttacgtacagcacgagagctttctcataaattggatcatgaaccgagcgcggaagagatt
gcagagcaactcgacaagccggtcgatgacgtgagccgtatattacgccttaacgaacgt
atcacttctgttgatacgcctttaggcggcgactcagagaaagcgttgttggatattctg
tctgacgaaaatgagaacggtccggaagatacaacacaagatgacgatatgaaacagagt
atcgttaagtggttgtttgagttgaatgcaaaacagcgcgaagtgttggcccgtcgtttt
ggtctgttaggatatgaagcggcaacattggaagatgttggccgagaaattggtttgaca
cgcgagcgtgtccgccagattcaggttgaaggcttacgccgtctgcgggaaatcctgcaa
acgcaaggcctgagcatcgaggcgttgttccgcgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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