KEGG   Yersinia pseudotuberculosis MD67: BZ21_2599
Entry
BZ21_2599         CDS       T03677                                 
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ypu  Yersinia pseudotuberculosis MD67
Pathway
ypu02020  Two-component system
ypu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ypu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BZ21_2599
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BZ21_2599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ypu03021]
    BZ21_2599
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ypu02035]
    BZ21_2599
Transcription machinery [BR:ypu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BZ21_2599
Bacterial motility proteins [BR:ypu02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BZ21_2599
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_38 UPF0122 HTH_Tnp_ISL3 MarR_2 HTH_23 UPF0175 DUF4143 GerE
Other DBs
NCBI-ProteinID: AJJ03406
Position
complement(2946006..2946701)
AA seq 231 aa
MENREFEACLTLTAAEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQIALMGLLEAL
RRYGHPDGQFAAYAVHRIRGSILDQLREHDWRPRRLRQKTHKTNEAIRQIAKRLGHEPNF
EEISAELNLTADEYQEYLLLENAGAMESLDEILALDAHNDILQSRDLEENIIIEDNLKQA
ISALDEREQMILHLYYQQELSMKEIAQVLDLTEARICQLNKKLVQKIKSFF
NT seq 696 nt   +upstreamnt  +downstreamnt
atggaaaatagagaatttgaagcgtgcttaacgctcaccgccgcagaggaagggaaatat
ctgaatgcgtatttaccgctggtaaaacgtattgtcaggcagctctctttccaggcggat
agcgtcatcggcaaggaggatatgcagcaaattgcattgatggggctattagaggcactg
cgccgctatggtcaccctgacgggcaatttgccgcttatgccgttcatcggatccgcggt
tcaatattggatcaattgagggagcatgattggcggccccgtcggttgcggcagaaaacc
cacaaaaccaatgaggcaatccggcaaatcgcgaaacggctgggccatgaacctaacttt
gaggagatcagcgccgaattaaatctaacggcagatgaatatcaggaatatctcttgttg
gagaatgcgggtgcgatggaaagcctggatgaaattctcgcattagatgctcacaatgat
attttgcaaagtcgtgatctggaagagaatattattattgaagataatctcaaacaggcg
atcagcgcattagatgaacgtgagcagatgattttgcatctttattatcagcaagaactg
agtatgaaagagattgcacaagtactggatctcactgaggcacgcatctgccaactcaat
aagaaattagtacaaaaaattaaatcatttttttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (14)   

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