KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448162
Entry
135448162         CDS       T09958                                 
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    135448162 (PAPOLA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zle03019]
    135448162 (PAPOLA)
Enzymes [BR:zle01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     135448162 (PAPOLA)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     135448162 (PAPOLA)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central RMD6 DUF4269
Other DBs
NCBI-GeneID: 135448162
NCBI-ProteinID: XP_064569903
Position
5:complement(9135005..9178976)
AA seq 739 aa
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTAASVTNTQASEVTVPQINSSESSGGTSNESIPQTATQ
PAISPPPKPTISRIVPSAYLLNPSPRSSGNVATKMPSPVAAVKRTSSPHKEESPKKIKIE
EQDEISEDTSCIDLNEHEKMETKEQVETEVNVNSQTETLQTTSLQAPQKTPSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccgtttcccgttacaacccagggatcacaaacacagcaactacagaagcattatggc
attacctcacccatcagtttagctgcccccaaggagtttgactgcatgcttacccagaaa
ttaatcgaaaccctaaaaccttatggtgtgtttgaagaggaagaggagctgcaacgcagg
attctaattttgggaaaattaaataacttggtaaaggaatggatccgagaaatcagtgaa
agcaagaatcttccgcaatcggtgatagaaaacgttggaggaaaaatttttacatttgga
tcgtatagattaggggttcatacaaaaggtgctgatattgatgccctgtgtgttgcacca
agacatgtggaaagaagtgattttttcacatcgttttatgaaaagttaaaacagcaagaa
gaagtgaaagatctgagggctgttgaagaagcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagatctacgagacgacagccttcttaaaaatttagacattagatgcatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaattgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggtgtgtcctgggctatgctagtagcaagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacgtacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctcccaacttctttcagaagtacaagcattatattgtactcctagcaagtgca
ccgacagaaaagcagcgactagaatgggtgggcttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaacgaattcattacactggctcatgtgaatccacagtcattc
ccagcacccaaggagaatcctgacaaggaggaataccgtacaatgtgggtgattgggttg
gtgtttaagaaaactgaaaactcagaaaatttaagtgttgatcttacctacgacattcag
tcttttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcaccaactgctacctaatcatgtg
cttcagaaaaagaaaaagcattcaacagaagggatcaggttgacagctctgaatgacagc
agcctagacttgtctatggacagtgataacagcacgtctgtgccttcgcctaccagtgct
atgaagacaagtccgttgaacagttctggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcagcatctgtgaccaacacacaggcttctgaagtcactgtgccacaaata
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttctccaccaccaaagcctaccatctctagaattgttccctcagcgtatcta
ttaaatccatcaccaagaagttcaggaaatgttgcaacaaaaatgcctagccctgtcgca
gcagtgaaaaggacatcttctccccataaagaagagtctcctaagaaaattaaaattgaa
gagcaggatgaaataagtgaagatactagctgtatagatttgaatgaacatgaaaaaatg
gaaactaaggagcaagttgagacagaagtgaatgttaattctcaaacagaaactcttcag
acaacttctcttcaagctcctcagaaaacacccagtacagacctttcagatatccctgct
cttcctgcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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