KEGG   Zingiber officinale (ginger): 122000981
Entry
122000981         CDS       T08725                                 
Name
(RefSeq) amino acid transporter AVT1C-like
  KO
K15015  solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:zof00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    122000981
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:zof02000]
    122000981
Transporters [BR:zof02000]
 Solute carrier family (SLC)
  SLC32: Vesicular inhibitory amino acid transporter
   122000981
SSDB
Motif
Pfam: Aa_trans RGCC
Other DBs
NCBI-GeneID: 122000981
NCBI-ProteinID: XP_042411440
Position
7A:12406577..12410652
AA seq 540 aa
MKKDESDLASAVKLEIDDEGNLGHHNDGAVIFWSSSSSSCSSSSSRGDCNGEDPDPYQTT
WPQSYRQSIDVFSSELSQKVELLKDSGFARVSNSFIRSSFAFDREELNSPTQSLLPRASE
RNHVGADLAFVDTVPPKISQTFSSYNDLPPTRQCSTAQALVNGMNVLCGVGILSIPYAVK
EGGWLGLILLFGMGSISFYTGILLKRCLDSSPGLKTYPDIGHAAFGLAGRVFISIVLYLE
LYGCCVEFITMVGDNLESIFPNARTNFLGFDLSAQQSFAVATAIVVLPTVWLRNLSLLSY
ISAGGVFLSILVTICLLWVGVVDKVGFHSGGTALNLVDLPIAIGLYGFCYSGHSVFPNIY
SSMKNPSRFPIILLICFILSTILYSGVATAGYLIFGDSLKSQFTLNMPHQYLSSQIAVWT
TVISPLTKYALTITPIALSIEELLPSSGNLCFIMVLIRTLLVLSTLVVALTFPYFAYVMA
LLGSVFAMLLALILPCACYLSIKRKSATYLQVSVCTLIIMVAVASSFIGSYSSIEQMLAQ
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgaagaaagacgagagcgatcttgccagtgcagtcaagttagagattgacgacgagggc
aacctcggccaccacaatgacggcgctgtgattttctggtcttcttcttcttcttcttgt
tcgtcgtcgtcgtcccgtggcgactgcaatggcgaagatcccgatccttatcagacaacc
tggccccagagttacaggcagtcgattgatgtttttagcagcgagttgagtcaaaaagtt
gagctcttgaaagattcaggtttcgcccgcgttagcaattcattcatcaggagttcattt
gctttcgaccgggaggaattgaattctccaacacaatccctgttacctcgtgcttcagag
cggaaccatgttggagctgatctagccttcgtagacactgttccgccaaaaatttcacaa
accttttcttcttacaatgacttgccccctacgcggcaatgctctactgctcaagcattg
gtcaatggaatgaatgttttatgtggagtgggaatcctctcaattccttatgcagttaaa
gaaggaggatggttaggcttgattttactgtttggaatgggttccatctcattttacact
ggaatcttgctaaagcgatgtttagatagctctcccggactgaagacttatcctgatatc
ggacatgctgcatttggattggctggacgtgtatttatatcaatagtgctttacctagaa
ctctatggatgttgtgttgagttcataactatggtaggtgacaacttggaatctatcttc
ccaaatgcccggacaaatttcttgggatttgatttaagtgctcaacagtcctttgctgtt
gcaacagccattgtggttctccctaccgtttggctgagaaacctcagtttgctatcatat
atttcagctggtggggtgtttttatcaatattggtgacaatctgcttactttgggtcggt
gtggtggataaagtgggtttccattcgggtggaactgcactgaatctcgtcgatcttccg
attgcaattgggctgtatgggttctgctattcaggacattcagtttttccaaatatatat
tcctccatgaagaacccatctcgctttccaatcatcctactaatctgctttatactatct
acaattctgtattccggagtagctacggcggggtatttgatatttggtgattctctcaag
tctcagtttacgctgaatatgccccatcaatatctttcttctcagattgcagtatggact
acggttataagtccgttgacaaaatatgctttgactataacgccaattgcacttagcata
gaagaattgctgccttcatctgggaatttatgttttattatggtcttgatcagaacgctt
cttgttctttcaacattggttgtggcacttacatttccatacttcgcatatgtcatggca
ctgcttggttctgtctttgcaatgcttctggctctcattcttccctgtgcatgttatctc
agcatcaagcgtaaatctgcaacttatctacaggtctcagtttgcactctcattatcatg
gtagcagtggcatcttctttcattggctcatacagctccatcgagcagatgcttgctcaa
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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