KEGG   Zingiber officinale (ginger): 122023629
Entry
122023629         CDS       T08725                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122023629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122023629
Enzymes [BR:zof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     122023629
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     122023629
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 122023629
NCBI-ProteinID: XP_042437788
Position
9B:complement(95035425..95044599)
AA seq 777 aa
MGSSSEMGSAPPPFPIQYGITKPISTAGPTEADLKRTVELERLLVDAGLYESKEESTKRE
EVLEELDKIVKNWVKQLTHQRGYSDQMVEEANAVIFTFGSYRLGVHGPGADVDTLCVGPS
YVNREEDFFIIFHDILAEMEEVSELHPVPDAHVPVLKFKFREIPIDLLYASISQLVVPQD
LDISNGSVLYDVDEATVRSLNGCRGADQILRLVPNVVNFRTTLRCIKFWANRRGVYSNVT
GFLGGVNWALLVARVCQLYPNAVPSMLISRFFRVYTQWRWPNPVMLCAIEENELGFPVWD
PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQMGNKICEEIELNKACWTAL
FEPYRFFEAYKNYLQVDIVAADAEDLRLWKGWIESRLRQLTLKIERDTYGMLQCHPYPNE
YVDPSKQCSHCAFFMGLQRKQGVNIQEGQQFDIRGTVDEFRHEVNMYMFWKPGMEIYVSH
VRRKQVPSYVFPDGYKRPCPSRPMFLQRVDKTMSEEECQGGSSERRRKRKVDAECLGAIP
DKRASISPEKEKSLKSDGQDPVSIEENQSQSRTDAQGEYTCKRMGGDSVQQPKMKIETSC
LCAGPSKMASINPKHDHTIDGRDHVVKVNQNDNMLGYHEDHVGPGRQLQQSVRSIMDGAV
VRSYENYSKKLANGTSCLECEGASTRIVTSDLETKKQLVLQQSVGCDSKIADESQILQDG
RQFTSVGSDQIVNEPAQDSMADELEPNITVRVAIKSHGVSTDAPQKSALRLSLTTTA
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgggtagttcttcagaaatgggtagtgcacctccacctttcccaatacagtatggtata
acaaagccaatctcgactgctggacctactgaggctgatctcaagaggactgttgaactt
gaaaggctcttggttgatgctggactttatgagagcaaggaagaatctaccaagagggag
gaagtattagaagaactggataagattgtcaaaaattgggtgaaacaattaacgcatcaa
aggggctattctgatcaaatggttgaagaagcaaatgctgtcattttcacgtttggatct
tatagattgggggttcatggaccaggggctgatgttgacactttatgtgttggaccttcc
tatgttaaccgagaggaggatttctttattattttccatgatatattggctgaaatggag
gaagtctctgaactacatccagttcctgatgctcatgttccagtcctcaaatttaagttc
cgggaaatacccatcgatttactctatgctagtatatcacagttagttgttccacaggat
cttgatatttcaaatgggtctgtgctttatgatgttgatgaggcaactgtcagaagtctt
aatggctgcaggggagcagaccaaatcttacgtctggtgccaaatgtagtgaattttcga
accactctcagatgtataaaattttgggcgaatagacgcggtgtttattccaatgtcact
ggatttcttgggggtgttaactgggcactgttggttgctcgggtctgccaactttaccct
aatgctgtgcccagtatgctaatttcccgatttttcagagtttatacacagtggcgttgg
ccaaatccagtgatgttgtgtgctattgaagaaaatgagcttggctttccagtttgggat
ccacgcaagaacccacgagatcggactcaccacatgcctattattacaccggcatatcca
tgcatgaactctagctacaatgtatcaacaagcacattgagggtcatgatggaacaattt
caaatgggcaacaagatctgtgaggaaattgagttgaataaggcttgctggactgctctg
tttgaaccttaccgtttctttgaggcatacaaaaattatctccaggtcgacattgttgct
gctgatgctgaggatctaagactgtggaagggttggatagaatctcgtcttaggcagttg
acgctcaagattgagcgtgatacttatggtatgctgcagtgccatccatacccaaacgag
tacgttgatccatccaaacagtgctcacattgtgctttcttcatgggattgcaaaggaaa
caaggggttaacatacaagaaggtcaacagtttgatattcgtggtactgttgatgagttc
aggcatgaagtgaatatgtatatgttctggaaacctgggatggaaatatatgtatctcat
gtacgaaggaagcaagtaccttcttatgtgtttcctgatggctataagaggccttgccca
tcgagaccaatgttcctgcagcgcgttgataaaactatgagtgaagaggaatgccaaggt
ggatcctcagagcggcgacgtaagaggaaagttgacgctgaatgcttaggtgctatccca
gataaacgtgcttcaattagcccagaaaaggaaaagtctctaaaatcggatggacaagat
cctgtgagcatagaagagaatcaaagtcagagtagaacagatgcccaaggtgaatacact
tgtaagcggatgggtggtgattctgtacaacaacctaagatgaaaattgaaactagttgc
ttgtgtgctggacctagtaaaatggcatcaattaacccaaaacatgaccacacaattgat
ggaagagatcatgtagttaaagtgaatcagaatgacaatatgttaggttaccatgaggat
catgttggtccgggcaggcaattgcagcagtcagtcaggagcataatggatggtgcagtg
gtaagatcttatgagaactacagcaagaagttggcaaatggaacttcatgcctcgaatgt
gaaggagcttccactagaattgtgacatctgatctagagactaagaaacagttggttctg
cagcaatctgttggatgtgatagcaaaattgcagatgagagtcaaatattgcaagatggg
agacagtttacaagtgtagggtcggaccagattgtgaatgaacctgcacaagatagtatg
gcagatgagttggagccaaacatcacggtcagagtagcaattaaatcacacggagtgtct
actgatgctcctcagaagtctgcattaaggttaagtctgactactacagcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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