KEGG   Zingiber officinale (ginger): 122042341
Entry
122042341         CDS       T08725                                 
Name
(RefSeq) actin-related protein 3-like isoform X1
  KO
K18584  actin-related protein 3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04144  Endocytosis
zof04517  IgSF CAM signaling
zof05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:zof00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    122042341
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122042341
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    122042341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122042341
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zof04812]
    122042341
   04147 Exosome [BR:zof04147]
    122042341
Membrane trafficking [BR:zof04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    122042341
Cytoskeleton proteins [BR:zof04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     122042341
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122042341
  Exosomal proteins of other body fluids (saliva and urine)
   122042341
  Exosomal proteins of bladder cancer cells
   122042341
SSDB
Motif
Pfam: Actin MreB_Mbl ALP_N FtsA ANAPC9
Other DBs
NCBI-GeneID: 122042341
NCBI-ProteinID: XP_042458329
Position
2A:complement(131422045..131453151)
AA seq 426 aa
MDAASRPAVIVDNGTGYTKLGFAGNVEPCFTIPTVVATNESFSNQSRGPTKGNWMAQHNA
SVMADLDYLIGEDALQRFRVSNTYSLSYPVRNGQVENWDAMERFWQQCIFNYLRCDPEDH
YFLLTESPLTAPENREYAGEIMFETFNVPGLYIAVQPVLALAAGYTTSKCEMTGVVVDVG
DGATHVVPVADGYVIGGSIKSIPIAGKDVTQFVQQLMKERGEHIPPEDSLEVARKVKELY
CYTCSDIVKEFNKHDKDPRKYTKQWTGIKPKTGVSYTCDIGYERFLGPEIFFHPEIYSSD
FISPLPSVIDKCIQSAPIDTRRALYKNVVLSGGSTMFKDFNRRLQRDLKKIVDTRILASA
AQLEVVKSQPIQVNVVSHPIQRHAVWFGGSILASTPEFYGACHTKAEYEEYGASICRTNP
VFKGMY
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggacgctgcttctcggcccgcagtgatcgtcgacaacggcaccgggtataccaagttg
ggatttgctggcaatgtagaaccttgcttcaccatacccactgttgttgctaccaatgaa
tccttttcaaatcaatctagaggccctactaaaggaaattggatggcacagcataatgca
agtgtaatggcagatcttgattatttaattggggaagatgctttacagcgttttcgtgtt
agtaacacatacagtcttagttaccctgttcggaatggtcaggtggagaattgggatgca
atggaaagattttggcagcaatgtattttcaattacttgcgctgtgatccagaagatcat
tatttcctcctaactgaaagcccacttactgcacctgagaatcgagaatatgcaggagaa
atcatgttcgagacgtttaatgtccctgggttatatattgctgttcaacctgtccttgcc
cttgcagccgggtacactacttcaaagtgcgaaatgacaggcgttgttgtagatgttgga
gatggagctactcatgtagtgccagtggctgatggttatgtgattggaggtagcatcaaa
tccattcctattgctggcaaggatgttactcaatttgttcaacagcttatgaaggagaga
ggagaacatataccaccagaagattcattggaagtagcaaggaaggtcaaagaactgtat
tgttacacttgttcagatattgtgaaggagttcaataaacatgataaggaccctcgtaag
tatactaagcagtggactggtattaaaccaaagactggagtatcatatacctgtgatatt
ggatatgagcgctttcttggtcctgagatattttttcatcctgagatttatagtagtgat
tttatcagtcctttaccttctgtcattgacaagtgcatccagtcggctccaattgacact
agaagagctttgtacaagaatgtggtgctgtcaggaggatcaaccatgtttaaggacttc
aacaggagattgcaacgagatttgaaaaagattgtcgacactaggattttagcctctgct
gcccagcttgaagttgtaaaatctcagcctattcaagttaatgttgtgagccatccgatc
cagagacatgcagtttggtttggaggttctatacttgcctctactcctgaattctatggg
gcttgccacaccaaagcagaatatgaagagtatggagccagcatttgcagaactaatccc
gtcttcaaaggaatgtattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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