MGENES: KEGG Orthology annotated metagenome database
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Laboratory of Chemical Life Science, Bioinformatics Center,
Institute for Chemical Research, Kyoto University
Uji, Kyoto 611-0011, Japan
Web site: https://www.genome.jp/kegg/catalog/org_list3.html
Feedback: https://www.genome.jp/feedback/
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MGENES is a database of KEGG orthology annotated genes from metagenome samples.
The annotation is based on the protein level sequence similarities between
amino acid sequences from metagenomic samples and those from KEGG GENES
database. The summary of samples included in this database and the associated
pathway and functional classification data are available from the web version.

This directory contains following files.
meta.ent.gz: annotated gene entries.
meta.pep.gz: FASTA format amino acid sequences.
meta.nuc.gz: FASTA format nucleotide sequences.
mgenome:     annotated genome (sample) entries.

Separated versions can be found in the following directories.
Organismal:    directory containing human microbiome samples.
      Oral, Airway, Urogenital and Skin samples from Human Microbiome Project (HMP).
      Gut samples from HMP, MetaHIT and Japanese projects.
Environmental: directory containing environmental samples.
      Tara samples obtained from Tara Oceans project.
      GOS samples obtained from CAMERA portal.
      OSD samples obtained from Ocean Sampling Day project.
      Others obtained from NCBI GenBank env division.

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Last update: 2017/2/8