RCLASS: Reaction Classification and Ontology ============================================= Laboratory of Chemical Life Science, Bioinformatics Center, Institute for Chemical Research, Kyoto University Uji, Kyoto 611-0011, Japan Web site: https://www.genome.jp/reaction/ Feedback: https://www.genome.jp/feedback/?category=keggligand ================================================================== RCLASS is a database of reaction classification based on the chemical transformation patterns of main reactant pairs. The transformation pattern is described in RDM format defined in the RPAIR database. RCLASS entries are classified in hierarchical ways and used in the pathway analysis tools such as PathSearch (https://www.genome.jp/tools/pathsearch). This directory contains following files: rclass: Flat file formatted RCLASS database rpair: Flat file formatted RPAIR database rclass_fgc.keg: Hierarchical classification of reactions based on functional group conversion rclass_ac.keg: Hierarchical classification of reactions based on atom classes atomclass.html: HTHL file used for the reaction classification .keg files are best viewed by a Java application called KegHier, which can be downlaoded from the KegTools site: https://www.kegg.jp/kegg/download/kegtools.html ================================================================== Last update: 2012/11/20