manually annotated organisms

color : selected / not seleted

Eukaryotes
Animals
Mammals
Primates
Homo sapiens (human)
Pan troglodytes (chimpanzee)
Pan paniscus (bonobo)
Gorilla gorilla gorilla (western lowland gorilla)
Pongo abelii (Sumatran orangutan)
Nomascus leucogenys (northern white-cheeked gibbon)
Macaca mulatta (rhesus monkey)
Macaca fascicularis (crab-eating macaque)
Chlorocebus sabaeus (green monkey)
Rhinopithecus roxellana (golden snub-nosed monkey)
Rhinopithecus bieti (black snub-nosed monkey)
Callithrix jacchus (white-tufted-ear marmoset)
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Rodents
Mus musculus (house mouse)
Mus caroli (Ryukyu mouse)
Mus pahari (shrew mouse)
Rattus norvegicus (rat)
Meriones unguiculatus (Mongolian gerbil)
Cricetulus griseus (Chinese hamster)
Nannospalax galili (Upper Galilee mountains blind mole rat)
Heterocephalus glaber (naked mole-rat)
Castor canadensis (American beaver)
Lagomorpha
Oryctolagus cuniculus (rabbit)
Scandentia
Tupaia chinensis (Chinese tree shrew)
Carnivora
Canis lupus familiaris (dog)
Vulpes vulpes (red fox)
Ailuropoda melanoleuca (giant panda)
Ursus maritimus (polar bear)
Ursus arctos (brown bear)
Enhydra lutris kenyoni (northern sea otter)
Odobenus rosmarus divergens (Pacific walrus)
Felis catus (domestic cat)
Panthera tigris altaica (Amur tiger)
Panthera pardus (leopard)
Artiodactyla
Bos taurus (cow)
Bos mutus (wild yak)
Bos indicus (zebu cattle)
Bubalus bubalis (water buffalo)
Capra hircus (goat)
Ovis aries (sheep)
Sus scrofa (pig)
Camelus ferus (Wild Bactrian camel)
Camelus dromedarius (Arabian camel)
Balaenoptera acutorostrata scammoni (minke whale)
Lipotes vexillifer (Yangtze River dolphin)
Orcinus orca (killer whale)
Delphinapterus leucas (beluga whale)
Physeter macrocephalus (sperm whale)
Perissodactyla
Equus caballus (horse)
Equus przewalskii (Przewalski's horse)
Equus asinus (ass)
Chiroptera
Myotis brandtii (Brandt's bat)
Myotis davidii (David's myotis)
Miniopterus natalensis (Natal long-fingered bat)
Desmodus rotundus (common vampire bat)
Hipposideros armiger (great roundleaf bat)
Pteropus alecto (black flying fox)
Rousettus aegyptiacus (Egyptian rousette)
Pholidota
Manis javanica (Malayan pangolin)
Proboscidea
Loxodonta africana (African savanna elephant)
other Eutheria
Trichechus manatus latirostris (Florida manatee)
Didelphimorphia
Monodelphis domestica (gray short-tailed opossum)
other Metatheria
Sarcophilus harrisii (Tasmanian devil)
Phascolarctos cinereus (koala)
Monotremata
Ornithorhynchus anatinus (platypus)
Birds
Galliformes
Gallus gallus (chicken)
Meleagris gallopavo (turkey)
Coturnix japonica (Japanese quail)
Numida meleagris (helmeted guineafowl)
Anseriformes
Anas platyrhynchos (mallard)
Anser cygnoides (swan goose)
Passeriformes
Taeniopygia guttata (zebra finch)
Lonchura striata (white-rumped munia)
Serinus canaria (common canary)
Geospiza fortis (medium ground-finch)
Ficedula albicollis (collared flycatcher)
Pseudopodoces humilis (Tibetan ground-tit)
Parus major (Great Tit)
Cyanistes caeruleus (blue tit)
Corvus cornix (hooded crow)
Empidonax traillii (willow flycatcher)
Falconiformes
Falco peregrinus (peregrine falcon)
Falco cherrug (Saker falcon)
Strigiformes
Athene cunicularia (burrowing owl)
other Neoaves
Egretta garzetta (little egret)
Nipponia nippon (crested ibis)
Columba livia (rock pigeon)
Palaeognathae
Apteryx mantelli mantelli (North Island brown kiwi)
Reptiles
Crocodylia
Alligator sinensis (Chinese alligator)
Alligator mississippiensis (American alligator)
Testudines
Pelodiscus sinensis (Chinese soft-shelled turtle)
Chelonia mydas (green sea turtle)
Chrysemys picta (western painted turtle)
Squamata
Anolis carolinensis (green anole)
Pogona vitticeps (central bearded dragon)
Python bivittatus (Burmese python)
Protobothrops mucrosquamatus (Taiwan habu)
Thamnophis sirtalis (common garter snake)
Podarcis muralis (common wall lizard)
Gekko japonicus (Schlegel's Japanese gecko)
Amphibians
Anura
Xenopus laevis (African clawed frog)
Xenopus tropicalis (tropical clawed frog)
Nanorana parkeri (Xizang Plateau frog)
Fishes
Cypriniformes
Danio rerio (zebrafish)
Sinocyclocheilus rhinocerous
Sinocyclocheilus anshuiensis
Sinocyclocheilus grahami (golden-line barbel)
Cyprinus carpio (common carp)
Siluriformes
Ictalurus punctatus (channel catfish)
Pangasianodon hypophthalmus (striped catfish)
Characiformes
Astyanax mexicanus (Mexican tetra)
Gymnotiformes
Electrophorus electricus (electric eel)
other Teleostei
Takifugu rubripes (torafugu)
Tetraodon nigroviridis (spotted green pufferfish)
Larimichthys crocea (large yellow croaker)
Notothenia coriiceps (black rockcod)
Maylandia zebra (zebra mbuna)
Oreochromis niloticus (Nile tilapia)
Oryzias latipes (Japanese medaka)
Xiphophorus maculatus (southern platyfish)
Xiphophorus couchianus (Monterrey platyfish)
Poecilia reticulata (guppy)
Cyprinodon variegatus (sheepshead minnow)
Nothobranchius furzeri (turquoise killifish)
Kryptolebias marmoratus (mangrove rivulus)
Austrofundulus limnaeus (annual killifish)
Amphiprion ocellaris (clown anemonefish)
Cynoglossus semilaevis (tongue sole)
Paralichthys olivaceus (Japanese flounder)
Lates calcarifer (barramundi perch)
Seriola dumerili (greater amberjack)
Seriola lalandi dorsalis (Yellowtail amberjack)
Hippocampus comes (tiger tail seahorse)
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Salmo salar (Atlantic salmon)
Oncorhynchus tshawytscha (Chinook salmon)
Salvelinus sp. IW2-2015 (Arctic char)
Esox lucius (northern pike)
Scleropages formosus (Asian bonytongue)
Paramormyrops kingsleyae
Coelacanthiformes
Latimeria chalumnae (coelacanth)
other Vertebrates
Cartilaginous fishes
Callorhinchus milii (elephant shark)
Rhincodon typus (whale shark)
other Chordates
Cephalochordates
Branchiostoma floridae (Florida lancelet)
Tunicates
Ciona intestinalis (yellow sea squirt)
other Deuterostomes
Echinoderms
Strongylocentrotus purpuratus (purple sea urchin)
Acanthaster planci (crown-of-thorns starfish)
Hemichordates
Saccoglossus kowalevskii (acorn worm)
Insects
Diptera
Drosophila melanogaster (fruit fly)
Drosophila simulans
Drosophila yakuba
Drosophila ananassae
Drosophila serrata
Drosophila pseudoobscura
Drosophila persimilis
Drosophila miranda
Drosophila willistoni
Drosophila arizonae
Drosophila navojoa
Drosophila hydei
Drosophila virilis
Musca domestica (house fly)
Lucilia cuprina (Australian sheep blowfly)
Anopheles gambiae (malaria mosquito)
Aedes aegypti (yellow fever mosquito)
Aedes albopictus (Asian tiger mosquito)
Culex quinquefasciatus (southern house mosquito)
Hymenoptera
Apis mellifera (honey bee)
Bombus impatiens (common eastern bumble bee)
Bombus terrestris (buff-tailed bumblebee)
Ceratina calcarata (carpenter bee)
Osmia bicornis bicornis (red mason bee)
Solenopsis invicta (red fire ant)
Monomorium pharaonis (pharaoh ant)
Acromyrmex echinatior (Panamanian leafcutter ant)
Atta cephalotes (leaf cutting ant)
Pogonomyrmex barbatus (red harvester ant)
Vollenhovia emeryi
Harpegnathos saltator (Jerdon's jumping ant)
Dinoponera quadriceps
Camponotus floridanus (Florida carpenter ant)
Linepithema humile (Argentine ant)
Pseudomyrmex gracilis (graceful twig ant)
Ooceraea biroi (clonal raider ant)
Polistes canadensis
Nasonia vitripennis (jewel wasp)
Microplitis demolitor
Cephus cinctus (wheat stem sawfly)
Coleoptera
Tribolium castaneum (red flour beetle)
Dendroctonus ponderosae (mountain pine beetle)
Aethina tumida (small hive beetle)
Nicrophorus vespilloides (burying beetle)
Lepidoptera
Bombyx mori (domestic silkworm)
Bombyx mandarina (wild silkworm)
Danaus plexippus (monarch butterfly)
Papilio machaon (common yellow swallowtail)
Pieris rapae (cabbage white)
Helicoverpa armigera (cotton bollworm)
Trichoplusia ni (cabbage looper)
Plutella xylostella (diamondback moth)
other Insecta
Acyrthosiphon pisum (pea aphid)
Diuraphis noxia (Russian wheat aphid)
Aphis gossypii (cotton aphid)
Rhopalosiphum maidis (corn leaf aphid)
Bemisia tabaci (sweet potato whitefly)
Cimex lectularius (bed bug)
Zootermopsis nevadensis (dampwood termite)
other Arthropods
Springtails
Folsomia candida
Crustaceans
Daphnia pulex (common water flea)
Penaeus vannamei (Pacific white shrimp)
Chelicerates
Ixodes scapularis (black-legged tick)
Tetranychus urticae (two-spotted spider mite)
Dermatophagoides pteronyssinus (European house dust mite)
Centruroides sculpturatus (bark scorpion)
Parasteatoda tepidariorum (common house spider)
other Ecdysozoa
Nematodes
Caenorhabditis elegans (nematode)
Caenorhabditis briggsae (nematode)
Necator americanus (New World hookworm)
Brugia malayi (filaria)
Loa loa (eye worm)
Trichinella spiralis
other Protostomes
Annelids
Helobdella robusta
Mollusks
Lottia gigantea (owl limpet)
Pomacea canaliculata (golden apple snail)
Magallana gigas (Pacific oyster)
Mizuhopecten yessoensis (Yesso scallop)
Octopus bimaculoides (California two-spot octopus)
Brachiopoda
Lingula anatina
Flatworms
Schistosoma mansoni
other Eumetazoa
Cnidarians
Nematostella vectensis (starlet sea anemone)
Exaiptasia diaphana (Aiptasia)
Acropora digitifera (stony coral)
Acropora millepora
Pocillopora damicornis (lace coral)
Stylophora pistillata (Smooth Cauliflower Coral)
Dendronephthya gigantea (soft corals)
Hydra vulgaris (swiftwater hydra)
Placozoans
Trichoplax adhaerens (placozoan)
other Metazoa
Poriferans
Amphimedon queenslandica (sponge)
Plants
Eudicots
Mustard family
Arabidopsis thaliana (thale cress)
Arabidopsis lyrata (lyrate rockcress)
Capsella rubella (pink shepherd's-purse)
Camelina sativa (false flax)
Eutrema salsugineum (saltwater cress)
Brassica rapa (field mustard)
Brassica napus (rape)
Brassica oleracea (wild cabbage)
Raphanus sativus (radish)
Caper family
Tarenaya hassleriana (spider flower)
Papaya family
Carica papaya (papaya)
Rue family
Citrus sinensis (Valencia orange)
Citrus x clementina (clementine)
Mallow family
Theobroma cacao (cacao)
Gossypium raimondii
Gossypium hirsutum (upland cotton)
Gossypium arboreum (tree cotton)
Durio zibethinus (durian)
Myrtle family
Eucalyptus grandis (rose gum)
Pea family
Glycine max (soybean)
Glycine soja (wild soybean)
Vigna unguiculata (cowpea)
Medicago truncatula (barrel medic)
Lotus japonicus
Arachis duranensis
Arachis ipaensis
Lupinus angustifolius (narrow-leaved blue lupine)
Rose family
Fragaria vesca (woodland strawberry)
Rosa chinensis (China rose)
Prunus persica (peach)
Prunus mume (Japanese apricot)
Malus domestica (apple)
Buckthorn family
Ziziphus jujuba (Chinese jujube)
Cucumber family
Cucumis sativus (cucumber)
Cucumis melo (muskmelon)
Cucurbita maxima (winter squash)
Cucurbita moschata (crookneck pumpkin)
Cucurbita pepo subsp. pepo (vegetable marrow)
Spurge family
Ricinus communis (castor bean)
Hevea brasiliensis (rubber tree)
Manihot esculenta (cassava)
Willow family
Populus trichocarpa (black cottonwood)
Populus euphratica (Euphrates poplar)
Walnut family
Juglans regia (English walnut)
Beech family
Quercus suber (cork oak)
Grape family
Vitis vinifera (wine grape)
Nightshade family
Solanum lycopersicum (tomato)
Solanum pennellii
Nicotiana tabacum (common tobacco)
Nicotiana tomentosiformis
Morning-glory family
Ipomoea nil (Japanese morning glory)
Olive family
Olea europaea var. sylvestris (wild olive)
Daisy family
Helianthus annuus (common sunflower)
Lactuca sativa (garden lettuce)
Goosefoot family
Beta vulgaris (sugar beet)
Spinacia oleracea (spinach)
Chenopodium quinoa (quinoa)
Poppy family
Papaver somniferum (opium poppy)
Monocots
Grass family
Oryza sativa japonica (Japanese rice)
Oryza sativa japonica (Japanese rice) (RAPDB)
Aegilops tauschii (wheat D)
Zea mays (maize)
Palm family
Phoenix dactylifera (date palm)
Banana family
Musa acuminata (dessert banana)
Orchid family
Dendrobium catenatum
Phalaenopsis equestris
Asparagus family
Asparagus officinalis (garden asparagus)
Basal angiosperms
Amborella family
Amborella trichopoda
other Land plants
Mosses
Physcomitrium patens (spreading earthmoss)
Green algae
Chlorophyceae
Chlamydomonas reinhardtii
Monoraphidium neglectum
Trebouxiophyceae
Auxenochlorella protothecoides
Mamiellophyceae
Ostreococcus lucimarinus
Ostreococcus tauri
Micromonas commoda
Micromonas pusilla
Red algae
Bangiophyceae
Cyanidioschyzon merolae
Galdieria sulphuraria
Florideophyceae
Chondrus crispus (carragheen)
Fungi
Ascomycetes
Saccharomycetes
Saccharomyces cerevisiae (budding yeast)
Eremothecium gossypii
Kluyveromyces lactis
Kluyveromyces marxianus
Lachancea thermotolerans
Vanderwaltozyma polyspora
Zygosaccharomyces rouxii
Nakaseomyces glabratus
Naumovozyma castellii
Tetrapisispora phaffii
Pichiomycetes
Debaryomyces hansenii
Scheffersomyces stipitis
Meyerozyma guilliermondii
Spathaspora passalidarum
Lodderomyces elongisporus
Candida albicans
Clavispora lusitaniae ATCC 42720
Clavispora lusitaniae CBS 6936
Candidozyma auris
Komagataella phaffii
Pichia kudriavzevii
Dipodascomycetes
Yarrowia lipolytica
Sugiyamaella lignohabitans
Sordariomycetes
Neurospora crassa
Pyricularia oryzae
Fusarium graminearum
Fusarium pseudograminearum
Fusarium oxysporum
Fusarium vanettenii
Metarhizium acridum
Leotiomycetes
Sclerotinia sclerotiorum
Botrytis cinerea (gray mold)
Mollisia scopiformis
Eurotiomycetes
Aspergillus nidulans
Aspergillus fumigatus
Aspergillus fischeri
Aspergillus oryzae
Aspergillus niger (black aspergilli)
Aspergillus flavus
Penicillium rubens
Penicillium digitatum
Coccidioides immitis
Coccidioides posadasii
Uncinocarpus reesii
Trichophyton benhamiae
Paracoccidioides lutzii Pb01
Dothideomycetes
Parastagonospora nodorum
Bipolaris zeicola
Pezizomycetes
Tuber melanosporum
Schizosaccharomycetes
Schizosaccharomyces pombe (fission yeast)
Basidiomycetes
Tremellomycetes
Cryptococcus neoformans var. neoformans JEC21
Cryptococcus gattii
Tremella mesenterica
Agaricomycetes
Postia placenta
Trametes versicolor
Heterobasidion irregulare
Moniliophthora perniciosa
Schizophyllum commune
Ustilaginomycetes
Mycosarcoma maydis
Malasseziomycetes
Malassezia globosa
Malassezia restricta
Fungi incertae sedis
Microsporidia
Encephalitozoon cuniculi
Vairimorpha ceranae
Protists
other Opisthokonta
Choanoflagellates
Monosiga brevicollis
Amoebozoa
Dictyostelia
Dictyostelium discoideum (cellular slime mold)
Cavenderia fasciculata (cellular slime mold)
Entamoeba
Entamoeba histolytica
Entamoeba dispar
Entamoeba invadens
Acanthamoeba
Acanthamoeba castellanii
Alveolates
Apicomplexans
Plasmodium falciparum 3D7
Plasmodium falciparum Dd2
Plasmodium yoelii
Plasmodium knowlesi
Theileria annulata
Theileria parva
Theileria orientalis
Theileria equi
Babesia bovis
Babesia microti
Cryptosporidium parvum
Cryptosporidium hominis
Toxoplasma gondii
Ciliates
Tetrahymena thermophila
Paramecium tetraurelia
Stramenopiles
Diatoms
Phaeodactylum tricornutum
Fragilariopsis cylindrus
Thalassiosira pseudonana
Oomycetes
Saprolegnia parasitica
Euglenozoa
Kinetoplasts
Trypanosoma brucei brucei
Trypanosoma cruzi
Leishmania major
Leishmania infantum
Leishmania braziliensis
Heterolobosea
Tetramitia
Naegleria gruberi
Metamonada
Trichomonads
Trichomonas vaginalis
Diplomonads
Giardia lamblia
other Eukaryota
Haptophyta
Emiliania huxleyi
Cryptomonads
Guillardia theta
Prokaryotes
Bacteria
Enterobacteria
Escherichia
Escherichia coli K-12 MG1655
Escherichia coli K-12 W3110
Escherichia coli K-12 DH10B
Escherichia coli K-12 BW2952
Escherichia coli O157:H7 EDL933 (EHEC)
Escherichia coli O157:H7 Sakai (EHEC)
Escherichia coli O157:H7 EC4115 (EHEC)
Escherichia coli O157:H7 TW14359 (EHEC)
Escherichia coli O111:H- 11128 (EHEC)
Escherichia coli O26:H11 11368 (EHEC)
Escherichia coli O103:H2 12009 (EHEC)
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Escherichia coli 55989 (EAEC)
Escherichia coli O127:H6 E2348/69 (EPEC)
Escherichia coli O55:H7 CB9615 (EPEC)
Escherichia coli O139:H28 E24377A (ETEC)
Escherichia coli O6:K15:H31 536 (UPEC)
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Escherichia coli APEC O1 (APEC)
Escherichia coli O9 HS (commensal)
Escherichia coli SMS-3-5 (environmental)
Escherichia coli O152:H28 SE11 (commensal)
Escherichia coli O8 IAI1 (commensal)
Escherichia coli O81 ED1a (commensal)
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Escherichia coli O7:K1 IAI39 (ExPEC)
Escherichia coli B REL606
Escherichia coli BL21-Gold(DE3)pLysS AG
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Escherichia coli O45:K1:H7 S88 (ExPEC)
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Escherichia coli ATCC 8739
Escherichia fergusonii
Salmonella
Salmonella enterica subsp. enterica serovar Typhi CT18
Salmonella enterica subsp. enterica serovar Typhi Ty2
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Salmonella enterica subsp. enterica serovar Typhimurium U288
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Salmonella enterica subsp. enterica serovar Paratyphi B
Salmonella enterica subsp. enterica serovar Paratyphi C
Salmonella enterica subsp. enterica serovar Choleraesuis
Salmonella enterica subsp. enterica serovar Heidelberg SL476
Salmonella enterica subsp. enterica serovar Newport SL254
Salmonella enterica subsp. enterica serovar Schwarzengrund
Salmonella enterica subsp. enterica serovar Agona SL483
Salmonella enterica subsp. enterica serovar Dublin
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Salmonella enterica subsp. enterica serovar Enteritidis P125109
Salmonella enterica subsp. enterica serovar Javiana
Salmonella enterica subsp. arizonae
Salmonella bongori NCTC 12419
Shigella
Shigella flexneri 301 (serotype 2a)
Shigella flexneri 2457T (serotype 2a)
Shigella flexneri 8401 (serotype 5b)
Shigella sonnei Ss046
Shigella boydii Sb227 (serotype 4)
Shigella boydii CDC 3083-94 (serotype 18)
Shigella dysenteriae Sd197
Enterobacter
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter sp. 638
Cronobacter
Cronobacter sakazakii ATCC BAA-894
Cronobacter turicensis
Klebsiella
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella variicola At-22
Klebsiella variicola 342
Klebsiella michiganensis KCTC 1686
Raoultella
Raoultella terrigena
Citrobacter
Citrobacter rodentium
Citrobacter koseri
Citrobacter amalonaticus Y19
Blochmanniella
Candidatus Blochmanniella floridana
Candidatus Blochmanniella pennsylvanica
Williamhamiltonella
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Riesia
Candidatus Riesia pediculicola
Moranella
Candidatus Moranella endobia PCIT
Pluralibacter
Enterobacter lignolyticus SCF1
Yersinia
Yersinia pestis CO92 (biovar Orientalis)
Yersinia pestis KIM10+ (biovar Mediaevalis)
Yersinia pestis Antiqua (biovar Antiqua)
Yersinia pestis Nepal516 (biovar Antiqua)
Yersinia pestis 91001 (biovar Microtus)
Yersinia pestis Pestoides F (biovar Antiqua)
Yersinia pestis Angola
Yersinia pestis Z176003
Yersinia pestis PBM19
Yersinia pseudotuberculosis IP 32953 (serotype I)
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Yersinia pseudotuberculosis YPIII (serotype O:3)
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Yersinia hibernica CFS1934
Serratia
Serratia proteamaculans
Rahnella
Rahnella aceris Y9602
Rahnella aquatilis HX2
Gibbsiella
Gibbsiella quercinecans
Prodigiosinella
Prodigiosinella confusarubida ATCC 39006
Pectobacterium
Pectobacterium atrosepticum SCRI1043
Pectobacterium carotovorum subsp. carotovorum PC1
Pectobacterium parmentieri WPP163
Dickeya
Dickeya dadantii 3937
Dickeya chrysanthemi
Dickeya parazeae
Musicola
Musicola paradisiaca
Sodalis
Sodalis glossinidius
Erwinia
Erwinia amylovora CFBP1430
Erwinia amylovora ATCC 49946
Erwinia tasmaniensis
Erwinia pyrifoliae Ep1/96
Erwinia billingiae
Buchnera
Buchnera aphidicola APS (Acyrthosiphon pisum)
Buchnera aphidicola 5A (Acyrthosiphon pisum)
Buchnera aphidicola Tuc7 (Acyrthosiphon pisum)
Buchnera aphidicola Sg (Schizaphis graminum)
Buchnera aphidicola Bp (Baizongia pistaciae)
Buchnera aphidicola BCc
Wigglesworthia
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Pantoea
Pantoea ananatis LMG 20103
Photorhabdus
Photorhabdus laumondii subsp. laumondii TTO1
Photorhabdus asymbiotica
Proteus
Proteus mirabilis HI4320
Xenorhabdus
Xenorhabdus bovienii SS-2004
Providencia
Providencia stuartii MRSN 2154
Edwardsiella
Edwardsiella ictaluri
Edwardsiella piscicida EIB202
other Gammaproteobacteria
Haemophilus
Haemophilus influenzae Rd KW20 (serotype d)
Haemophilus influenzae 86-028NP (nontypeable)
Haemophilus influenzae PittEE (nontypeable)
Haemophilus influenzae PittGG (nontypeable)
Haemophilus influenzae F3031 (nontypeable)
Haemophilus influenzae 10810 (serotype b)
Haemophilus parainfluenzae
Haemophilus ducreyi
Glaesserella
Glaesserella parasuis SH0165
Histophilus
Histophilus somni 129PT
Histophilus somni 2336
Pasteurella
Pasteurella multocida subsp. multocida Pm70
Basfia
Mannheimia succiniciproducens
Actinobacillus
Actinobacillus pleuropneumoniae L20 (serotype 5b)
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Actinobacillus pleuropneumoniae AP76 (serotype 7)
Actinobacillus succinogenes
Aggregatibacter
Aggregatibacter aphrophilus NJ8700
Aggregatibacter actinomycetemcomitans D11S-1
Gallibacterium
Gallibacterium anatis
Xylella
Xylella fastidiosa 9a5c
Xylella fastidiosa Temecula1
Xylella fastidiosa M12
Xylella fastidiosa M23
Xanthomonas
Xanthomonas campestris pv. campestris ATCC 33913
Xanthomonas campestris pv. campestris 8004
Xanthomonas campestris pv. campestris B100
Xanthomonas euvesicatoria pv. vesicatoria
Xanthomonas citri pv. citri 306
Xanthomonas oryzae pv. oryzae MAFF 311018
Xanthomonas oryzae pv. oryzae KACC 10331
Xanthomonas oryzae pv. oryzae PXO99A
Xanthomonas albilineans
Xanthomonas phaseoli
Stenotrophomonas
Stenotrophomonas maltophilia K279a
Stenotrophomonas maltophilia R551-3
Pseudoxanthomonas
Pseudoxanthomonas suwonensis 11-1
Frateuria
Frateuria aurantia
Vibrio
Vibrio cholerae O1 El Tor N16961
Vibrio cholerae O1 MJ-1236
Vibrio cholerae O1 O395
Vibrio cholerae O1 M66-2
Vibrio vulnificus CMCP6
Vibrio vulnificus YJ016
Vibrio vulnificus MO6-24/O
Vibrio parahaemolyticus RIMD 2210633
Vibrio campbellii ATCC BAA-1116
Vibrio antiquarius
Vibrio atlanticus
Vibrio anguillarum 775
Aliivibrio
Aliivibrio fischeri ES114
Aliivibrio fischeri MJ11
Aliivibrio salmonicida
Photobacterium
Photobacterium profundum
Pseudomonas
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas aeruginosa LESB58
Pseudomonas paraeruginosa PA7
Pseudomonas putida KT2440
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida W619
Pseudomonas syringae pv. tomato DC3000
Pseudomonas syringae pv. syringae B728a
Pseudomonas savastanoi pv. phaseolicola 1448A
Pseudomonas protegens Pf-5
Pseudomonas fluorescens Pf0-1
Pseudomonas fluorescens SBW25
Pseudomonas entomophila
Ectopseudomonas
Ectopseudomonas mendocina ymp
Stutzerimonas
Stutzerimonas stutzeri A1501
Azotobacter
Azotobacter vinelandii DJ
Marinobacter
Marinobacter nauticus VT8
Psychrobacter
Psychrobacter arcticus
Psychrobacter cryohalolentis
Psychrobacter sp. PRwf-1
Acinetobacter
Acinetobacter baumannii ATCC 17978
Acinetobacter baumannii SDF
Acinetobacter baumannii AYE
Acinetobacter baumannii ACICU
Acinetobacter baumannii AB0057
Acinetobacter baumannii AB307-0294
Acinetobacter oleivorans
Acinetobacter baylyi
Moraxella
Moraxella catarrhalis BBH18
Shewanella
Shewanella oneidensis
Shewanella denitrificans
Shewanella frigidimarina
Shewanella amazonensis
Shewanella baltica OS155
Shewanella baltica OS185
Shewanella baltica OS195
Shewanella baltica OS223
Shewanella loihica
Shewanella putrefaciens CN-32
Shewanella sediminis
Shewanella pealeana
Shewanella sp. MR-4
Shewanella sp. MR-7
Shewanella sp. ANA-3
Shewanella sp. W3-18-1
Shewanella halifaxensis
Shewanella woodyi
Shewanella piezotolerans
Shewanella violacea
Idiomarina
Idiomarina loihiensis L2TR
Colwellia
Colwellia psychrerythraea
Litorilituus
Litorilituus sediminis
Pseudoalteromonas
Pseudoalteromonas translucida TAC125
Alteromonas
Alteromonas mediterranea DE
Glaciecola
Glaciecola sp. 4H-3-7+YE-5
Paraglaciecola
Paraglaciecola sp. T6c
Psychromonas
Psychromonas ingrahamii
Ferrimonas
Ferrimonas balearica
Cellvibrio
Cellvibrio japonicus
Saccharophagus
Saccharophagus degradans
Teredinibacter
Teredinibacter turnerae
Coxiella
Coxiella burnetii RSA 493
Coxiella burnetii RSA 331
Coxiella burnetii Dugway 5J108-111
Coxiella burnetii CbuG_Q212
Coxiella burnetii CbuK_Q154
Legionella
Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
Legionella pneumophila Lens (serogroup 1)
Legionella pneumophila Paris (serogroup 1)
Legionella pneumophila Corby
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Legionella longbeachae
Methylococcus
Methylococcus capsulatus
Methylomonas
Methylomonas methanica
Methylotuvimicrobium
Methylotuvimicrobium alcaliphilum
Francisella
Francisella tularensis subsp. tularensis SCHU S4
Francisella tularensis subsp. tularensis FSC198
Francisella tularensis subsp. tularensis WY96-3418
Francisella tularensis subsp. holarctica LVS
Francisella tularensis subsp. holarctica OSU18
Francisella tularensis subsp. holarctica FTNF002-00
Francisella tularensis subsp. mediasiatica FSC147
Francisella tularensis subsp. novicida U112
Francisella philomiragia subsp. philomiragia ATCC 25017
Hydrogenovibrio
Hydrogenovibrio crunogenus
Thiomicrospira
Thiomicrospira cyclica
Methylophaga
Methylophaga nitratireducenticrescens
Nitrosococcus
Nitrosococcus oceani
Nitrosococcus halophilus
Nitrosococcus watsonii
Allochromatium
Allochromatium vinosum
Alkalilimnicola
Alkalilimnicola ehrlichii
Halorhodospira
Halorhodospira halophila
Thioalkalivibrio
Thioalkalivibrio sulfidiphilus
Thioalkalivibrio sp. K90mix
Halothiobacillus
Halothiobacillus neapolitanus
Hahella
Hahella chejuensis
Hahella sp. KA22
Chromohalobacter
Chromohalobacter israelensis
Halomonas
Halomonas elongata
Carsonella
Candidatus Carsonella ruddii PV
Alcanivorax
Alcanivorax borkumensis
Marinomonas
Marinomonas sp. MWYL1
Aeromonas
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas salmonicida subsp. salmonicida A449
Tolumonas
Tolumonas auensis
Oceanimonas
Oceanimonas sp. GK1
Kangiella
Kangiella koreensis
Dichelobacter
Dichelobacter nodosus
Ruthturnera
Candidatus Ruthia magnifica (Calyptogena magnifica)
Vesicomyosocius
Candidatus Vesicomyosocius okutanii
Palibaumannia
Baumannia cicadellinicola Hc (Homalodisca coagulata)
unclassified Gammaproteobacteria
Gamma proteobacterium HdN1
Betaproteobacteria
Neisseria
Neisseria meningitidis MC58 (serogroup B)
Neisseria meningitidis Z2491 (serogroup A)
Neisseria meningitidis FAM18 (serogroup C)
Neisseria meningitidis 053442 (serogroup C)
Neisseria meningitidis alpha14 (cnl strain)
Neisseria gonorrhoeae FA 1090
Neisseria gonorrhoeae NCCP11945
Chromobacterium
Chromobacterium violaceum
Pseudogulbenkiania
Pseudogulbenkiania sp. NH8B
Laribacter
Laribacter hongkongensis
Ralstonia
Ralstonia pseudosolanacearum GMI1000
Ralstonia solanacearum CFBP2957
Ralstonia solanacearum PSI07
Ralstonia pickettii 12J
Ralstonia pickettii 12D
Cupriavidus
Cupriavidus necator H16
Cupriavidus pinatubonensis JMP134
Cupriavidus metallidurans
Cupriavidus taiwanensis
Burkholderia
Burkholderia mallei ATCC 23344
Burkholderia mallei SAVP1
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia pseudomallei K96243
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 668
Burkholderia pseudomallei MSHR346
Burkholderia thailandensis E264
Burkholderia vietnamiensis G4
Burkholderia lata
Burkholderia orbicola
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia J2315
Burkholderia ambifaria AMMD
Burkholderia ambifaria MC40-6
Burkholderia multivorans ATCC 17616 (Tohoku)
Burkholderia multivorans ATCC 17616 (JGI)
Burkholderia glumae BGR1
Burkholderia sp. CCGE1001
Burkholderia sp. CCGE1003
Paraburkholderia
Paraburkholderia xenovorans LB400
Paraburkholderia phymatum
Paraburkholderia atlantica CCGE1002
Paraburkholderia phytofirmans PsJN
Mycetohabitans
Mycetohabitans rhizoxinica
Polynucleobacter
Polynucleobacter asymbioticus
Polynucleobacter necessarius
Pandoraea
Pandoraea apista
Bordetella
Bordetella pertussis Tohama I
Bordetella parapertussis 12822
Bordetella bronchiseptica RB50
Bordetella petrii
Bordetella avium
Bordetella pseudohinzii
Achromobacter
Achromobacter xylosoxidans A8
Taylorella
Taylorella equigenitalis MCE9
Pusillimonas
Pusillimonas sp. T7-7
Advenella
Advenella kashmirensis
Rhodoferax
Rhodoferax ferrireducens
Polaromonas
Polaromonas sp. JS666
Polaromonas naphthalenivorans
Acidovorax
Acidovorax sp. JS42
Paracidovorax
Paracidovorax citrulli
Paracidovorax avenae
Verminephrobacter
Verminephrobacter eiseniae
Delftia
Delftia acidovorans
Delftia sp. Cs1-4
Variovorax
Variovorax paradoxus S110
Variovorax paradoxus EPS
Comamonas
Comamonas thiooxydans
Alicycliphilus
Alicycliphilus denitrificans BC
Alicycliphilus denitrificans K601
Ramlibacter
Ramlibacter tataouinensis
Diaphorobacter
Acidovorax ebreus
Methylibium
Methylibium petroleiphilum
Leptothrix
Leptothrix cholodnii
Herminiimonas
Herminiimonas arsenicoxydans
Janthinobacterium
Janthinobacterium sp. Marseille
Herbaspirillum
Herbaspirillum seropedicae SmR1
Zinderia
Candidatus Zinderia insecticola
Collimonas
Collimonas fungivorans
Thiomonas
Thiomonas intermedia
Nitrosomonas
Nitrosomonas europaea
Nitrosomonas eutropha
Nitrosospira
Nitrosospira multiformis
Thiobacillus
Thiobacillus denitrificans
Methylobacillus
Methylobacillus flagellatus
Methylotenera
Methylotenera mobilis
Methylotenera versatilis
Methylovorus
Methylovorus glucosotrophus
Sideroxydans
Sideroxydans lithotrophicus
Gallionella
Gallionella capsiferriformans
Azospira
Azospira oryzae
Aromatoleum
Aromatoleum aromaticum
Dechloromonas
Dechloromonas aromatica
Azoarcus
Azoarcus olearius BH72
Thauera
Thauera aminoaromatica
Accumulibacter
Candidatus Accumulibacter phosphatis
Tremblaya
Candidatus Tremblaya princeps PCIT
Alphaproteobacteria
Rickettsia
Rickettsia prowazekii Madrid E
Rickettsia typhi Wilmington
Rickettsia canadensis McKiel
Rickettsia bellii RML369-C
Rickettsia bellii OSU 85-389
Rickettsia conorii
Rickettsia felis
Rickettsia akari
Rickettsia rickettsii Sheila Smith
Rickettsia rickettsii Iowa
Rickettsia massiliae MTU5
Rickettsia peacockii
Rickettsia africae
Orientia
Orientia tsutsugamushi Boryong
Orientia tsutsugamushi Ikeda
Wolbachia
Wolbachia endosymbiont of Drosophila melanogaster
Wolbachia sp. wRi
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Wolbachia endosymbiont strain TRS of Brugia malayi
Anaplasma
Anaplasma marginale St. Maries
Anaplasma marginale Florida
Anaplasma centrale
Anaplasma phagocytophilum HZ
Ehrlichia
Ehrlichia ruminantium Welgevonden (South Africa)
Ehrlichia ruminantium Welgevonden (France)
Ehrlichia ruminantium Gardel
Ehrlichia canis
Ehrlichia chaffeensis Arkansas
Neorickettsia
Neorickettsia sennetsu
Neorickettsia risticii
Midichloria
Candidatus Midichloria mitochondrii
Mesorhizobium
Mesorhizobium japonicum MAFF 303099
Chelativorans
Chelativorans sp. BNC1
Parvibaculum
Parvibaculum lavamentivorans
Sinorhizobium
Sinorhizobium meliloti 1021
Sinorhizobium medicae
Sinorhizobium fredii NGR234
Agrobacterium
Agrobacterium fabrum
Allorhizobium
Allorhizobium ampelinum
Rhizobium
Rhizobium etli CFN 42
Rhizobium etli CIAT 652
Rhizobium johnstonii
Rhizobium leguminosarum bv. trifolii WSM2304
Rhizobium leguminosarum bv. trifolii WSM1325
Rhizobium rhizogenes K84
Liberibacter
Candidatus Liberibacter asiaticus psy62
Brucella
Brucella melitensis bv. 1 16M
Brucella melitensis ATCC 23457
Brucella abortus 2308
Brucella abortus bv. 1 9-941
Brucella abortus S19
Brucella abortus A13334
Brucella suis 1330
Brucella suis ATCC 23445
Brucella ovis
Brucella canis ATCC 23365
Brucella microti
Brucella anthropi ATCC 49188
Bradyrhizobium
Bradyrhizobium diazoefficiens USDA 110
Bradyrhizobium sp. ORS 278
Bradyrhizobium sp. BTAi1
Rhodopseudomonas
Rhodopseudomonas palustris CGA009
Rhodopseudomonas palustris HaA2
Rhodopseudomonas palustris BisB18
Rhodopseudomonas palustris BisB5
Rhodopseudomonas palustris BisA53
Rhodopseudomonas palustris TIE-1
Nitrobacter
Nitrobacter winogradskyi
Nitrobacter hamburgensis
Afipia
Afipia carboxidovorans OM5 (Mississippi)
Bartonella
Bartonella henselae Houston-1
Bartonella quintana Toulouse
Bartonella bacilliformis
Bartonella tribocorum CIP 105476
Bartonella grahamii
Xanthobacter
Xanthobacter autotrophicus
Azorhizobium
Azorhizobium caulinodans
Ancylobacter
Ancylobacter novellus
Methylorubrum
Methylorubrum extorquens AM1
Methylorubrum extorquens DM4
Methylorubrum extorquens PA1
Methylorubrum extorquens CM4
Methylorubrum populi
Methylobacterium
Methylobacterium radiotolerans
Methylobacterium sp. 4-46
Methylobacterium nodulans
Beijerinckia
Beijerinckia indica
Methylocella
Methylocella silvestris
Hyphomicrobium
Hyphomicrobium denitrificans ATCC 51888
Rhodomicrobium
Rhodomicrobium vannielii
Pelagibacterium
Pelagibacterium halotolerans
Hodgkinia
Candidatus Hodgkinia cicadicola Dsem
Pseudovibrio
Pseudovibrio sp. FO-BEG1
Caulobacter
Caulobacter vibrioides CB15
Caulobacter vibrioides NA1000
Caulobacter sp. K31
Caulobacter segnis
Phenylobacterium
Phenylobacterium zucineum
Brevundimonas
Brevundimonas subvibrioides
Asticcacaulis
Asticcacaulis excentricus
Ruegeria
Ruegeria pomeroyi
Ruegeria sp. TM1040
Jannaschia
Jannaschia sp. CCS1
Roseobacter
Roseobacter denitrificans
Dinoroseobacter
Dinoroseobacter shibae
Ketogulonicigenium
Ketogulonicigenium vulgare Y25
Cereibacter
Cereibacter sphaeroides 2.4.1
Cereibacter sphaeroides ATCC 17029
Cereibacter sphaeroides ATCC 17025
Cereibacter sphaeroides KD131
Paracoccus
Paracoccus denitrificans
Polymorphum
Polymorphum gilvum
Rhodobacter
Rhodobacter capsulatus
Maricaulis
Maricaulis maris
Hyphomonas
Hyphomonas neptunium
Hirschia
Hirschia baltica
Zymomonas
Zymomonas mobilis subsp. mobilis ZM4
Zymomonas mobilis subsp. mobilis NCIMB 11163
Novosphingobium
Novosphingobium aromaticivorans
Sphingopyxis
Sphingopyxis alaskensis
Rhizorhabdus
Rhizorhabdus wittichii RW1
Sphingobium
Sphingobium indicum UT26S
Erythrobacter
Erythrobacter litoralis HTCC2594
Gluconobacter
Gluconobacter oxydans 621H
Granulibacter
Granulibacter bethesdensis CGDNIH1
Gluconacetobacter
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Acetobacter
Acetobacter pasteurianus IFO 3283-01
Acidiphilium
Acidiphilium cryptum
Azospirillum
Azospirillum sp. B510
Rhodospirillum
Rhodospirillum rubrum ATCC 11170
Rhodospirillum centenum
Paramagnetospirillum
Paramagnetospirillum magneticum
Parvularcula
Parvularcula bermudensis
Pelagibacter
Candidatus Pelagibacter ubique
Puniceispirillum
Candidatus Puniceispirillum marinum
other Pseudomonadota
Acidithiobacillus
Acidithiobacillus ferrooxidans ATCC 23270
Acidithiobacillus ferrooxidans ATCC 53993
Magnetococcus
Magnetococcus marinus
Campylobacterota
Helicobacter
Helicobacter pylori 26695
Helicobacter pylori J99
Helicobacter pylori HPAG1
Helicobacter pylori Shi470
Helicobacter pylori G27
Helicobacter pylori P12
Helicobacter pylori B38
Helicobacter pylori B8
Helicobacter hepaticus
Helicobacter acinonychis
Helicobacter mustelae
Wolinella
Wolinella succinogenes
Sulfurimonas
Sulfurimonas denitrificans
Sulfuricurvum
Sulfuricurvum kujiense
Campylobacter
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Campylobacter jejuni subsp. jejuni 81-176
Campylobacter jejuni subsp. jejuni 81116
Campylobacter jejuni RM1221
Campylobacter jejuni subsp. doylei 269.97
Campylobacter fetus subsp. fetus 82-40
Campylobacter curvus
Campylobacter hominis
Campylobacter concisus 13826
Campylobacter lari RM2100
Sulfurospirillum
Sulfurospirillum deleyianum
Aliarcobacter
Aliarcobacter butzleri RM4018
Arcobacter
Arcobacter nitrofigilis
Nitratifractor
Nitratifractor salsuginis
Sulfurovum
Sulfurovum sp. NBC37-1
Nitratiruptor
Nitratiruptor sp. SB155-2
Nautilia
Nautilia profundicola
Hippea
Hippea maritima
Thermodesulfobacteriota
Geobacter
Geobacter sulfurreducens PCA
Geobacter metallireducens
Geobacter sp. M21
Geotalea
Geotalea uraniireducens
Geotalea daltonii
Trichlorobacter
Trichlorobacter lovleyi
Citrifermentans
Citrifermentans bemidjiense
Syntrophotalea
Syntrophotalea carbinolica
Pelobacter
Pelobacter propionicus
Desulfovibrio
Desulfovibrio desulfuricans ATCC 27774
Solidesulfovibrio
Solidesulfovibrio magneticus
Oleidesulfovibrio
Oleidesulfovibrio alaskensis
Maridesulfovibrio
Maridesulfovibrio salexigens
Lawsonia
Lawsonia intracellularis PHE/MN1-00
Nitratidesulfovibrio
Nitratidesulfovibrio vulgaris Hildenborough
Nitratidesulfovibrio vulgaris DP4
Nitratidesulfovibrio vulgaris Miyazaki F
Desulfomicrobium
Desulfomicrobium baculatum
Desulfohalobium
Desulfohalobium retbaense
Desulfotalea
Desulfotalea psychrophila
Desulfurivibrio
Desulfurivibrio alkaliphilus
Desulfobulbus
Desulfobulbus propionicus
Desulfosudis
Desulfosudis oleivorans
Desulfatibacillum
Desulfatibacillum aliphaticivorans
Desulforapulum
Desulforapulum autotrophicum
Syntrophus
Syntrophus aciditrophicus
Desulfobacca
Desulfobacca acetoxidans
Syntrophobacter
Syntrophobacter fumaroxidans
Desulfarculus
Desulfarculus baarsii
Thermodesulfatator
Thermodesulfatator indicus
Thermodesulfobacterium
Thermodesulfobacterium geofontis
Myxococcota
Anaeromyxobacter
Anaeromyxobacter dehalogenans 2CP-C
Anaeromyxobacter dehalogenans 2CP-1
Anaeromyxobacter sp. Fw109-5
Anaeromyxobacter sp. K
Myxococcus
Myxococcus xanthus
Corallococcus
Corallococcus macrosporus HW-1
Stigmatella
Stigmatella aurantiaca
Sorangium
Sorangium cellulosum So ce56
Haliangium
Haliangium ochraceum
Bdellovibrionota
Bdellovibrio
Bdellovibrio bacteriovorus HD100
Halobacteriovorax
Halobacteriovorax marinus
Thermomicrobiota
Thermomicrobium
Thermomicrobium roseum
Sphaerobacter
Sphaerobacter thermophilus
Thermodesulfobiota
Thermodesulfobium
Thermodesulfobium narugense
Chlamydiota
Chlamydia
Chlamydia trachomatis D/UW-3/CX
Chlamydia trachomatis A/HAR-13
Chlamydia trachomatis L2/434/Bu
Chlamydia trachomatis L2b/UCH-1/proctitis
Chlamydia trachomatis B/Jali20/OT
Chlamydia muridarum Nigg
Chlamydia pneumoniae CWL029
Chlamydia pneumoniae AR39
Chlamydia pneumoniae J138
Chlamydia pneumoniae TW-183
Chlamydia caviae
Chlamydia abortus S26/3
Chlamydia felis Fe/C-56
Protochlamydia
Candidatus Protochlamydia amoebophila
Parachlamydia
Parachlamydia acanthamoebae
Waddlia
Waddlia chondrophila
Simkania
Simkania negevensis
Verrucomicrobiota
Opitutus
Opitutus terrae
Coraliomargarita
Coraliomargarita akajimensis
Akkermansia
Akkermansia muciniphila
Methylacidiphilum
Methylacidiphilum infernorum
Planctomycetota
Rhodopirellula
Rhodopirellula baltica
Pirellula
Pirellula staleyi
Planctopirus
Planctopirus limnophila
Isosphaera
Isosphaera pallida
Spirochaetota
Borreliella
Borreliella burgdorferi B31
Borreliella burgdorferi ZS7
Borrelia garinii subsp. bavariensis
Borrelia afzelii (FLI)
Borrelia
Borrelia turicatae
Borrelia hermsii DAH
Borrelia duttonii
Borrelia recurrentis
Treponema
Treponema pallidum subsp. pallidum Nichols
Treponema pallidum subsp. pallidum SS14
Treponema denticola
Sediminispirochaeta
Sediminispirochaeta smaragdinae
Leptospira
Leptospira interrogans serovar Lai 56601
Leptospira interrogans serovar Copenhageni
Leptospira borgpetersenii JB197
Leptospira borgpetersenii L550
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Leptospira biflexa serovar Patoc Patoc 1 (Ames)
Brachyspira
Brachyspira hyodysenteriae WA1
Brachyspira murdochii
Brachyspira pilosicoli 95/1000
Acidobacteriota
Korobacter
Candidatus Koribacter versatilis
Acidobacterium
Acidobacterium capsulatum
Granulicella
Granulicella tundricola
Terriglobus
Terriglobus saanensis
Chloracidobacterium
Chloracidobacterium thermophilum
Solibacter
Candidatus Solibacter usitatus
Elusimicrobiota
Elusimicrobium
Elusimicrobium minutum
Endomicrobiellum
Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008
Fibrobacterota
Fibrobacter
Fibrobacter succinogenes
Gemmatimonadota
Gemmatimonas
Gemmatimonas aurantiaca
Bacteroidota
Bacteroides
Bacteroides thetaiotaomicron VPI-5482
Bacteroides fragilis YCH46
Bacteroides fragilis NCTC 9343
Phocaeicola
Phocaeicola vulgatus
Porphyromonas
Porphyromonas gingivalis W83
Porphyromonas gingivalis ATCC 33277
Azobacteroides
Candidatus Azobacteroides pseudotrichonymphae
Paludibacter
Paludibacter propionicigenes
Parabacteroides
Parabacteroides distasonis
Odoribacter
Odoribacter splanchnicus
Xylanibacter
Xylanibacter ruminicola
Chitinophaga
Chitinophaga pinensis
Haliscomenobacter
Haliscomenobacter hydrossis
Pedobacter
Pedobacter heparinus
Pseudopedobacter
Pseudopedobacter saltans
Sphingobacterium
Sphingobacterium sp. 21
Cyclobacterium
Cyclobacterium marinum
Cytophaga
Cytophaga hutchinsonii
Spirosoma
Spirosoma linguale
Leadbetterella
Leadbetterella byssophila
Dyadobacter
Dyadobacter fermentans
Runella
Runella slithyformis
Marivirga
Marivirga tractuosa
Amoebophilus
Candidatus Amoebophilus asiaticus
Christiangramia
Christiangramia forsetii
Flavobacterium
Flavobacterium psychrophilum JIP02/86
Flavobacterium johnsoniae UW101
Flavobacterium branchiophilum
Capnocytophaga
Capnocytophaga ochracea
Robiginitalea
Robiginitalea biformata
Zunongwangia
Zunongwangia profunda
Croceibacter
Croceibacter atlanticus
Maribacter
Maribacter sp. HTCC2170
Cellulophaga
Cellulophaga algicola
Cellulophaga lytica DSM 7489
Dokdonia
Dokdonia sp. 4H-3-7-5
Lacinutrix
Lacinutrix sp. 5H-3-7-4
Flagellimonas
Allomuricauda ruestringensis
unclassified Flavobacteriaceae
Flavobacteriaceae bacterium 3519-10
Riemerella
Riemerella anatipestifer ATCC 11845 = DSM 15868
Weeksella
Weeksella virosa
Karelsulcia
Candidatus Karelsulcia muelleri GWSS
Candidatus Karelsulcia muelleri SMDSEM
Candidatus Karelsulcia muelleri DMIN
Candidatus Karelsulcia muelleri CARI
Blattabacterium
Blattabacterium sp. (Blattella germanica) Bge
Blattabacterium sp. BPLAN (Periplaneta americana)
Fluviicola
Fluviicola taffensis
Chlorobiota
Chlorobaculum
Chlorobaculum tepidum
Chlorobaculum parvum
Chlorobium
Chlorobium chlorochromatii
Chlorobium phaeobacteroides DSM 266
Chlorobium phaeobacteroides BS1
Chlorobium limicola
Chlorobium phaeovibrioides
Pelodictyon
Pelodictyon luteolum
Pelodictyon phaeoclathratiforme
Prosthecochloris
Prosthecochloris aestuarii
Chloroherpeton
Chloroherpeton thalassium
Rhodothermota
Rhodothermus
Rhodothermus marinus DSM 4252
Salinibacter
Salinibacter ruber DSM 13855
Salinibacter ruber M8
Aquificota
Aquifex
Aquifex aeolicus
Hydrogenobaculum
Hydrogenobaculum sp. Y04AAS1
Hydrogenobacter
Hydrogenobacter thermophilus
Thermocrinis
Thermocrinis albus
Sulfurihydrogenibium
Sulfurihydrogenibium sp. YO3AOP1
Sulfurihydrogenibium azorense
Persephonella
Persephonella marina
Thermovibrio
Thermovibrio ammonificans
Desulfurobacterium
Desulfurobacterium thermolithotrophum
Coprothermobacterota
Coprothermobacter
Coprothermobacter proteolyticus
Chrysiogenota
Desulfurispirillum
Desulfurispirillum indicum
Deferribacterota
Deferribacter
Deferribacter desulfuricans
Denitrovibrio
Denitrovibrio acetiphilus
Calditerrivibrio
Calditerrivibrio nitroreducens
Flexistipes
Flexistipes sinusarabici
Dictyoglomota
Dictyoglomus
Dictyoglomus thermophilum
Dictyoglomus turgidum
Nitrospirota
Thermodesulfovibrio
Thermodesulfovibrio yellowstonii
Nitrospira
Nitrospira defluvii
Bacilli
Bacillus
Bacillus subtilis subsp. subtilis 168
Bacillus licheniformis ATCC 14580
Bacillus licheniformis DSM 13 = ATCC 14580
Bacillus velezensis FZB42
Bacillus amyloliquefaciens DSM 7
Bacillus anthracis Ames
Bacillus anthracis Ames Ancestor
Bacillus anthracis Sterne
Bacillus anthracis CDC 684
Bacillus anthracis A0248
Bacillus cereus ATCC 14579
Bacillus cereus ATCC 10987
Bacillus cereus E33L
Bacillus cereus AH187
Bacillus cereus B4264
Bacillus cereus AH820
Bacillus cereus G9842
Bacillus cereus Q1
Bacillus cereus 03BB102
Bacillus cytotoxicus
Bacillus thuringiensis serovar konkukian 97-27
Bacillus thuringiensis Al Hakam
Bacillus thuringiensis BMB171
Bacillus mycoides KBAB4
Bacillus pumilus SAFR-032
Priestia
Priestia megaterium QM B1551
Priestia megaterium DSM 319
Halalkalibacterium
Halalkalibacterium halodurans
Shouchella
Shouchella clausii
Alkalihalophilus
Alkalihalophilus pseudofirmus
Oceanobacillus
Oceanobacillus iheyensis
Lysinibacillus
Lysinibacillus sphaericus
Heyndrickxia
Heyndrickxia coagulans 2-6
Salisediminibacterium
Bacillus selenitireducens
Geobacillus
Geobacillus kaustophilus
Geobacillus thermodenitrificans
Geobacillus sp. WCH70
Geobacillus sp. Y412MC61
Geobacillus sp. C56-T3
Parageobacillus
Parageobacillus thermoglucosidasius C56-YS93
Anoxybacillus
Anoxybacillus flavithermus
Staphylococcus
Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA)
Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA)
Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA)
Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA)
Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA)
Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
Staphylococcus aureus subsp. aureus MSSA476 (MSSA)
Staphylococcus aureus subsp. aureus MRSA252 (MRSA)
Staphylococcus aureus subsp. aureus COL (MRSA)
Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA)
Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA)
Staphylococcus aureus subsp. aureus NCTC8325
Staphylococcus aureus subsp. aureus Newman
Staphylococcus aureus subsp. aureus ED98
Staphylococcus aureus subsp. aureus M013 (CA-MRSA)
Staphylococcus aureus RF122
Staphylococcus epidermidis RP62A (MRSE)
Staphylococcus epidermidis ATCC 12228
Staphylococcus haemolyticus JCSC1435
Staphylococcus saprophyticus
Staphylococcus carnosus subsp. carnosus
Staphylococcus lugdunensis HKU09-01
Staphylococcus pseudintermedius HKU10-03
Macrococcoides
Macrococcoides caseolyticum
Listeria
Listeria monocytogenes EGD-e (serotype 1/2a)
Listeria monocytogenes 08-5578 (serotype 1/2a)
Listeria monocytogenes 08-5923 (serotype 1/2a)
Listeria monocytogenes F2365 (serotype 4b)
Listeria monocytogenes CLIP 80459 (serotype 4b)
Listeria monocytogenes HCC23 (serotype 4a)
Listeria innocua (serotype 6a)
Listeria welshimeri
Listeria seeligeri
Exiguobacterium
Exiguobacterium sibiricum
Exiguobacterium sp. AT1b
Brevibacillus
Brevibacillus brevis
Paenibacillus
Paenibacillus sp. JDR-2
Paenibacillus sp. Y412MC10
Alicyclobacillus
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Kyrpidia
Kyrpidia tusciae
Lactococcus
Lactococcus lactis subsp. lactis Il1403
Lactococcus lactis subsp. lactis KF147
Lactococcus lactis subsp. cremoris MG1363
Lactococcus lactis subsp. cremoris SK11
Streptococcus
Streptococcus pyogenes M1 GAS (serotype M1)
Streptococcus pyogenes MGAS5005 (serotype M1)
Streptococcus pyogenes MGAS8232 (serotype M18)
Streptococcus pyogenes MGAS315 (serotype M3)
Streptococcus pyogenes SSI-1 (serotype M3)
Streptococcus pyogenes MGAS10270 (serotype M2)
Streptococcus pyogenes MGAS10750 (serotype M4)
Streptococcus pyogenes MGAS2096 (serotype M12)
Streptococcus pyogenes MGAS9429 (serotype M12)
Streptococcus pyogenes Manfredo (serotype M5)
Streptococcus pyogenes MGAS10394 (serotype M6)
Streptococcus pyogenes MGAS6180 (serotype M28)
Streptococcus pyogenes NZ131 (serotype M49)
Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Streptococcus pneumoniae D39 (virulent serotype 2)
Streptococcus pneumoniae R6 (avirulent serotype 2)
Streptococcus pneumoniae CGSP14 (serotype 14)
Streptococcus pneumoniae JJA (serotype 14)
Streptococcus pneumoniae G54 (serotype 19F)
Streptococcus pneumoniae Taiwan19F-14 (serotype 19F)
Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
Streptococcus pneumoniae Hungary19A 6 (serotype 19A)
Streptococcus pneumoniae TCH8431/19A (serotype 19A)
Streptococcus pneumoniae 70585 (serotype 5)
Streptococcus pneumoniae P1031 (serotype 1)
Streptococcus agalactiae 2603 (serotype V)
Streptococcus agalactiae NEM316 (serotype III)
Streptococcus agalactiae A909 (serotype Ia)
Streptococcus mutans UA159 (serotype c)
Streptococcus mutans NN2025 (serotype c)
Streptococcus thermophilus CNRZ1066
Streptococcus thermophilus LMG 18311
Streptococcus thermophilus LMD-9
Streptococcus sanguinis
Streptococcus suis BM407 (serotype 2)
Streptococcus suis 05ZYH33 (serotype 2)
Streptococcus suis 98HAH33 (serotype 2)
Streptococcus suis P1/7 (serotype 2)
Streptococcus suis SC84 (serotype 2)
Streptococcus gordonii
Streptococcus equi subsp. zooepidemicus MGCS10565
Streptococcus equi subsp. zooepidemicus H70
Streptococcus equi subsp. equi 4047
Streptococcus uberis
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Streptococcus gallolyticus UCN34
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Streptococcus mitis
Streptococcus pseudopneumoniae
Lactobacillus
Lactobacillus johnsonii NCC 533
Lactobacillus johnsonii FI9785
Lactobacillus acidophilus NCFM
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus gasseri ATCC 33323
Lactobacillus helveticus DPC 4571
Lactobacillus crispatus
Lacticaseibacillus
Lacticaseibacillus paracasei ATCC 334
Lacticaseibacillus paracasei BL23
Lacticaseibacillus rhamnosus GG
Lacticaseibacillus rhamnosus Lc 705
Lactiplantibacillus
Lactiplantibacillus plantarum WCFS1
Lactiplantibacillus plantarum JDM1
Limosilactobacillus
Limosilactobacillus reuteri subsp. reuteri DSM 20016
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Limosilactobacillus fermentum IFO 3956
Levilactobacillus
Levilactobacillus brevis ATCC 367
Ligilactobacillus
Ligilactobacillus salivarius UCC118
Pediococcus
Pediococcus pentosaceus ATCC 25745
Pediococcus claussenii
Latilactobacillus
Latilactobacillus sakei subsp. sakei
Oenococcus
Oenococcus oeni
Leuconostoc
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Leuconostoc citreum
Leuconostoc kimchii
Leuconostoc sp. C2
Leuconostoc gasicomitatum
Weissella
Weissella koreensis
Enterococcus
Enterococcus faecalis V583
Enterococcus faecium Aus0004
Melissococcus
Melissococcus plutonius ATCC 35311
Tetragenococcus
Tetragenococcus halophilus NBRC 12172
Aerococcus
Aerococcus sp. Group 1
Carnobacterium
Carnobacterium sp. 17-4
Clostridia
Clostridium
Clostridium acetobutylicum ATCC 824
Clostridium perfringens 13
Clostridium perfringens ATCC 13124
Clostridium perfringens SM101
Clostridium tetani E88
Clostridium novyi
Clostridium botulinum A ATCC 3502
Clostridium botulinum A ATCC 19397
Clostridium botulinum A Hall
Clostridium botulinum A2
Clostridium botulinum A3 Loch Maree
Clostridium botulinum B Eklund 17B (NRP)
Clostridium botulinum B1 Okra
Clostridium botulinum Ba4
Clostridium botulinum E3
Clostridium botulinum F Langeland
Clostridium beijerinckii NCIMB 8052
Clostridium kluyveri DSM 555
Clostridium kluyveri NBRC 12016
Arthromitus
Candidatus Arthromitus sp. SFB-mouse-Japan
Mageeibacillus
Mageeibacillus indolicus
Acetivibrio
Acetivibrio thermocellus ATCC 27405
Ruminiclostridium
Ruminiclostridium cellulolyticum
Ethanoligenens
Ethanoligenens harbinense
Ruminococcus
Ruminococcus albus
Oscillibacter
Oscillibacter valericigenes
Symbiobacterium
Symbiobacterium thermophilum
Syntrophomonas
Syntrophomonas wolfei
Syntrophothermus
Syntrophothermus lipocalidus
Desulfitobacterium
Desulfitobacterium hafniense Y51
Desulfitobacterium hafniense DCB-2
Syntrophobotulus
Syntrophobotulus glycolicus
Pelotomaculum
Pelotomaculum thermopropionicum
Desulforamulus
Desulforamulus reducens
Desulfofarcimen
Desulfofarcimen acetoxidans
Thermincola
Thermincola potens
Heliomicrobium
Heliomicrobium modesticaldum
Thermaerobacter
Thermaerobacter marianensis
Sulfobacillus
Sulfobacillus acidophilus TPY
Butyrivibrio
Butyrivibrio proteoclasticus
Roseburia
Roseburia hominis
Lachnoclostridium
Lachnoclostridium phytofermentans
Lachnospira
Eubacterium eligens
Agathobacter
Agathobacter rectalis ATCC 33656
Cellulosilyticum
Cellulosilyticum lentocellum
Alkaliphilus
Alkaliphilus metalliredigens
Alkaliphilus oremlandii
Clostridioides
Clostridioides difficile 630
Clostridioides difficile CD196
Clostridioides difficile R20291
Desulforudis
Candidatus Desulforudis audaxviator
Caldanaerobacter
Caldanaerobacter subterraneus subsp. tengcongensis
Thermoanaerobacter
Thermoanaerobacter sp. X514
Thermoanaerobacter pseudethanolicus
Thermoanaerobacter italicus
Thermoanaerobacter mathranii
Carboxydothermus
Carboxydothermus hydrogenoformans
Ammonifex
Ammonifex degensii
Thermoanaerobacterium
Thermoanaerobacterium thermosaccharolyticum DSM 571
Mahella
Mahella australiensis
Moorella
Moorella thermoacetica ATCC 39073
Tepidanaerobacter
Tepidanaerobacter acetatoxydans Re1
Thermosediminibacter
Thermosediminibacter oceani
Natranaerobius
Natranaerobius thermophilus
Halothermothrix
Halothermothrix orenii
Halanaerobium
Halanaerobium hydrogeniformans
Acetohalobium
Acetohalobium arabaticum
other Bacillota
Finegoldia
Finegoldia magna
Anaerococcus
Anaerococcus prevotii
Veillonella
Veillonella parvula
Megasphaera
Megasphaera elsdenii
Selenomonas
Selenomonas sputigena
Acidaminococcus
Acidaminococcus fermentans
Erysipelothrix
Erysipelothrix rhusiopathiae Fujisawa
Caldicellulosiruptor
Caldicellulosiruptor saccharolyticus
Caldicellulosiruptor bescii
Mycoplasmatota
Mycoplasma
Mycoplasma mycoides subsp. mycoides SC PG1
Mycoplasma capricolum subsp. capricolum ATCC 27343
Mycoplasma crocodyli
Phytoplasma
Onion yellows phytoplasma OY-M
Aster yellows witches'-broom phytoplasma AYWB
Candidatus Phytoplasma mali
Candidatus Phytoplasma australiense
Acholeplasma
Acholeplasma laidlawii
Mesoplasma
Mesoplasma florum L1
Mesomycoplasma
Mycoplasma mobile
Mesomycoplasma hyopneumoniae 232
Mesomycoplasma hyopneumoniae J
Mesomycoplasma hyopneumoniae 7448
Mesomycoplasma conjunctivae
Mycoplasmopsis
Mycoplasmopsis pulmonis
Mycoplasmopsis synoviae 53
Mycoplasmopsis agalactiae PG2
Mycoplasmopsis agalactiae 5632
Metamycoplasma
Metamycoplasma arthritidis
Metamycoplasma hominis ATCC 23114
Ureaplasma
Ureaplasma parvum serovar 3 ATCC 700970
Ureaplasma parvum serovar 3 ATCC 27815
Ureaplasma urealyticum
Mycoplasmoides
Mycoplasmoides genitalium G37
Mycoplasmoides pneumoniae M129
Mycoplasmoides gallisepticum R(low)
Malacoplasma
Malacoplasma penetrans
Actinomycetota
Lancefieldella
Lancefieldella parvula
Olsenella
Olsenella uli
Coriobacterium
Coriobacterium glomerans
Cryptobacterium
Cryptobacterium curtum
Slackia
Slackia heliotrinireducens
Eggerthella
Eggerthella lenta
Mycobacterium
Mycobacterium tuberculosis H37Rv
Mycobacterium tuberculosis CDC1551
Mycobacterium tuberculosis H37Ra
Mycobacterium tuberculosis F11
Mycobacterium tuberculosis KZN 1435
Mycobacterium tuberculosis variant bovis AF2122/97
Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Mycobacterium tuberculosis variant microti
Mycobacterium leprae TN
Mycobacterium leprae Br4923
Mycobacterium avium subsp. paratuberculosis K-10
Mycobacterium avium 104
Mycobacterium ulcerans
Mycobacterium marinum M
Mycobacterium sp. MCS
Mycobacterium sp. KMS
Mycobacterium sp. JLS
Mycolicibacterium
Mycolicibacterium smegmatis MC2 155
Mycolicibacterium vanbaalenii
Mycolicibacterium gilvum PYR-GCK
Mycolicibacterium gilvum Spyr1
Mycobacteroides
Mycobacteroides abscessus ATCC 19977
Hoyosella
Hoyosella subflava
Corynebacterium
Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
Corynebacterium glutamicum ATCC 13032 (Bielefeld)
Corynebacterium glutamicum R
Corynebacterium efficiens
Corynebacterium diphtheriae NCTC 13129
Corynebacterium jeikeium
Corynebacterium urealyticum DSM 7109
Corynebacterium aurimucosum
Corynebacterium kroppenstedtii
Nocardia
Nocardia farcinica IFM 10152
Rhodococcus
Rhodococcus jostii
Rhodococcus erythropolis PR4
Rhodococcus opacus B4
Gordonia
Gordonia bronchialis
Tsukamurella
Tsukamurella paurometabola
Segniliparus
Segniliparus rotundus
Streptomyces
Streptomyces coelicolor
Streptomyces avermitilis
Streptomyces griseus
Streptomyces scabiei
Streptomyces noursei ATCC 11455
Tropheryma
Tropheryma whipplei Twist
Tropheryma whipplei TW08/27
Leifsonia
Leifsonia xyli subsp. xyli CTCB07
Clavibacter
Clavibacter michiganensis subsp. michiganensis
Clavibacter sepedonicus
Microbacterium
Microbacterium testaceum
Arthrobacter
Arthrobacter sp. FB24
Paenarthrobacter
Paenarthrobacter aurescens
Pseudarthrobacter
Pseudarthrobacter chlorophenolicus
Renibacterium
Renibacterium salmoninarum
Kocuria
Kocuria rhizophila
Micrococcus
Micrococcus luteus
Rothia
Rothia mucilaginosa
Beutenbergia
Beutenbergia cavernae
Brachybacterium
Brachybacterium faecium
Jonesia
Jonesia denitrificans
Kytococcus
Kytococcus sedentarius
Xylanimonas
Xylanimonas cellulosilytica
Isoptericola
Isoptericola variabilis
Sanguibacter
Sanguibacter keddieii
Cellulomonas
Cellulomonas flavigena
Intrasporangium
Intrasporangium calvum
Cutibacterium
Cutibacterium acnes KPA171202
Cutibacterium acnes SK137
Propionibacterium
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Microlunatus
Microlunatus phosphovorus
Nocardioides
Nocardioides sp. JS614
Kribbella
Kribbella flavida
Thermobifida
Thermobifida fusca
Nocardiopsis
Nocardiopsis dassonvillei
Thermomonospora
Thermomonospora curvata
Streptosporangium
Streptosporangium roseum
Thermobispora
Thermobispora bispora
Frankia
Frankia casuarinae
Frankia alni
Parafrankia
Parafrankia sp. EAN1pec
Pseudofrankia
Pseudofrankia inefficax
Acidothermus
Acidothermus cellulolyticus
Nakamurella
Nakamurella multipartita
Geodermatophilus
Geodermatophilus obscurus
Kineococcus
Kineococcus radiotolerans
Saccharopolyspora
Saccharopolyspora erythraea
Saccharomonospora
Saccharomonospora viridis
Amycolatopsis
Amycolatopsis mediterranei U32
Pseudonocardia
Pseudonocardia dioxanivorans
Actinosynnema
Actinosynnema mirum
Salinispora
Salinispora tropica
Salinispora arenicola
Micromonospora
Micromonospora aurantiaca
Micromonospora sp. L5
Micromonospora maris
Catenulispora
Catenulispora acidiphila
Stackebrandtia
Stackebrandtia nassauensis
Arcanobacterium
Arcanobacterium haemolyticum
Mobiluncus
Mobiluncus curtisii
Bifidobacterium
Bifidobacterium longum NCC2705
Bifidobacterium longum DJO10A
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Bifidobacterium longum subsp. infantis 157F
Bifidobacterium longum subsp. longum JDM301
Bifidobacterium longum subsp. longum BBMN68
Bifidobacterium adolescentis ATCC 15703
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium animalis subsp. lactis Bl-04
Bifidobacterium animalis subsp. lactis DSM 10140
Bifidobacterium dentium Bd1
Gardnerella
Gardnerella vaginalis 409-05
Rubrobacter
Rubrobacter xylanophilus
Conexibacter
Conexibacter woesei
Acidimicrobium
Acidimicrobium ferrooxidans
Cyanobacteriota
Synechocystis
Synechocystis sp. PCC 6803
Synechococcus
Synechococcus elongatus PCC6301
Synechococcus elongatus PCC7942
Synechococcus sp. CC9605
Synechococcus sp. CC9902
Synechococcus sp. CC9311
Synechococcus sp. RCC307
Synechococcus sp. WH 7803
Synechococcus sp. JA-3-3Ab
Synechococcus sp. JA-2-3B'a(2-13)
Parasynechococcus
Parasynechococcus marenigrum
Prochlorococcus
Prochlorococcus marinus subsp. marinus CCMP1375
Prochlorococcus marinus subsp. pastoris CCMP1986
Prochlorococcus marinus MIT 9313
Prochlorococcus marinus NATL2A
Prochlorococcus marinus MIT 9312
Prochlorococcus marinus AS9601
Prochlorococcus marinus MIT 9515
Prochlorococcus marinus MIT 9303
Prochlorococcus marinus MIT 9301
Prochlorococcus marinus MIT 9215
Prochlorococcus marinus MIT 9211
Prochlorococcus marinus NATL1A
Cyanothece
Cyanothece sp. PCC 7425
Thermosynechococcus
Thermosynechococcus vestitus
Acaryochloris
Acaryochloris marina
Picosynechococcus
Picosynechococcus sp. PCC 7002
Microcystis
Microcystis aeruginosa
Atelocyanobacterium
Candidatus Atelocyanobacterium thalassa
Crocosphaera
Crocosphaera subtropica
Rippkaea
Rippkaea orientalis PCC 8801
Rippkaea orientalis PCC 8802
Gloeothece
Gloeothece citriformis
Gloeothece verrucosa
Trichodesmium
Trichodesmium erythraeum
Gloeobacter
Gloeobacter violaceus
Nostoc
Nostoc sp. PCC 7120
Nostoc punctiforme
Trichormus
Trichormus variabilis
'Nostoc azollae' 0708
Chloroflexota
Dehalococcoides
Dehalococcoides mccartyi 195
Dehalococcoides mccartyi CBDB1
Dehalococcoides mccartyi BAV1
Dehalococcoides mccartyi VS
Dehalococcoides mccartyi GT
Dehalogenimonas
Dehalogenimonas lykanthroporepellens
Roseiflexus
Roseiflexus sp. RS-1
Roseiflexus castenholzii
Chloroflexus
Chloroflexus aurantiacus
Chloroflexus aurantiacus Y-400-fl
Chloroflexus aggregans
Herpetosiphon
Herpetosiphon aurantiacus
Thermobaculum
Thermobaculum terrenum
Anaerolinea
Anaerolinea thermophila
Armatimonadota
Chthonomonas
Chthonomonas calidirosea
Deinococcota
Deinococcus
Deinococcus radiodurans
Deinococcus geothermalis
Deinococcus deserti
Truepera
Truepera radiovictrix
Thermus
Thermus thermophilus HB27
Thermus thermophilus HB8
Meiothermus
Meiothermus ruber DSM 1279
Allomeiothermus
Allomeiothermus silvanus
Oceanithermus
Oceanithermus profundus
Marinithermus
Marinithermus hydrothermalis
Synergistota
Thermanaerovibrio
Thermanaerovibrio acidaminovorans
Aminobacterium
Aminobacterium colombiense
Thermovirga
Thermovirga lienii
Thermotogota
Thermotoga
Thermotoga maritima MSB8
Thermotoga petrophila RKU-1
Thermotoga petrophila RKU-10
Thermotoga sp. RQ2
Thermotoga neapolitana
Pseudothermotoga
Pseudothermotoga lettingae
Pseudothermotoga hypogea
Thermosipho
Thermosipho melanesiensis
Thermosipho africanus
Fervidobacterium
Fervidobacterium nodosum
Petrotoga
Petrotoga mobilis
Kosmotoga
Kosmotoga olearia
Fusobacteriota
Fusobacterium
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Ilyobacter
Ilyobacter polytropus
Leptotrichia
Leptotrichia buccalis
Sebaldella
Sebaldella termitidis
Streptobacillus
Streptobacillus moniliformis
Archaea
Methanobacteriota
Methanocaldococcus
Methanocaldococcus jannaschii
Methanocaldococcus fervens
Methanocaldococcus vulcanius
Methanocaldococcus sp. FS406-22
Methanocaldococcus infernus
Methanocaldococcus bathoardescens
Methanotorris
Methanotorris igneus
Methanococcus
Methanococcus maripaludis S2
Methanococcus maripaludis C5
Methanococcus maripaludis C6
Methanococcus maripaludis C7
Methanococcus aeolicus
Methanococcus vannielii
Methanococcus voltae
Methanothermococcus
Methanothermococcus okinawensis
Methanothermobacter
Methanothermobacter thermautotrophicus
Methanothermobacter marburgensis
Methanosphaera
Methanosphaera stadtmanae
Methanobrevibacter
Methanobrevibacter ruminantium
Methanobrevibacter smithii
Methanobacterium
Methanobacterium lacus
Methanothermus
Methanothermus fervidus
Methanopyrus
Methanopyrus kandleri
Archaeoglobus
Archaeoglobus fulgidus DSM 4304
Archaeoglobus profundus
Ferroglobus
Ferroglobus placidus
Pyrococcus
Pyrococcus furiosus DSM 3638
Pyrococcus horikoshii
Pyrococcus abyssi
Thermococcus
Thermococcus kodakarensis
Thermococcus onnurineus
Thermococcus gammatolerans
Thermococcus sibiricus
Thermococcus barophilus
Methanosarcina
Methanosarcina barkeri Fusaro
Methanosarcina acetivorans
Methanosarcina mazei Go1
Methanococcoides
Methanococcoides burtonii
Methanohalophilus
Methanohalophilus mahii
Methanohalobium
Methanohalobium evestigatum
Methanosalsum
Methanosalsum zhilinae
Methanolobus
Methanolobus psychrophilus
Methanomethylovorans
Methanomethylovorans hollandica
Methanothrix
Methanothrix thermoacetophila
Methanospirillum
Methanospirillum hungatei
Methanocorpusculum
Methanocorpusculum labreanum
Methanoculleus
Methanoculleus marisnigri
Methanoculleus bourgensis MAB1
Methanolacinia
Methanolacinia petrolearia
Methanoregula
Methanoregula boonei
Methanosphaerula
Methanosphaerula palustris
Methanocella
Methanocella paludicola
Methanocella arvoryzae
Halobacterium
Halobacterium salinarum NRC-1
Halobacterium salinarum R1
Halalkalicoccus
Halalkalicoccus jeotgali
Salinarchaeum
Salinarchaeum sp. Harcht-Bsk1
Haloarcula
Haloarcula marismortui
Natronomonas
Natronomonas pharaonis
Halorhabdus
Halorhabdus utahensis
Halomicrobium
Halomicrobium mukohataei
Haloquadratum
Haloquadratum walsbyi DSM 16790
Haloferax
Haloferax volcanii DS2
Halogeometricum
Halogeometricum borinquense
Halorubrum
Halorubrum lacusprofundi
unclassified Halobacteriales
Halophilic archaeon
Haloterrigena
Haloterrigena turkmenica
Natrialba
Natrialba magadii
Halopiger
Halopiger xanaduensis
Natrinema
Natrinema sp. J7-2
Natronobacterium
Natronobacterium gregoryi
Halovivax
Halovivax ruber
Natronococcus
Natronococcus occultus
Thermoplasmatota
Thermoplasma
Thermoplasma acidophilum
Thermoplasma volcanium
Picrophilus
Picrophilus oshimae
Methanomassiliicoccus
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Aciduliprofundum
Aciduliprofundum boonei
Thermoproteota
Aeropyrum
Aeropyrum pernix
Staphylothermus
Staphylothermus marinus
Staphylothermus hellenicus
Ignicoccus
Ignicoccus hospitalis
Desulfurococcus
Desulfurococcus amylolyticus 1221n
Desulfurococcus mucosus
Thermosphaera
Thermosphaera aggregans
Ignisphaera
Ignisphaera aggregans
Thermogladius
Thermogladius calderae
Hyperthermus
Hyperthermus butylicus
Pyrolobus
Pyrolobus fumarii
Sulfurisphaera
Sulfurisphaera tokodaii
Saccharolobus
Saccharolobus solfataricus P2
Saccharolobus islandicus L.S.2.15
Saccharolobus islandicus M.14.25
Saccharolobus islandicus M.16.27
Saccharolobus islandicus M.16.4
Saccharolobus islandicus Y.G.57.14
Saccharolobus islandicus Y.N.15.51
Saccharolobus islandicus L.D.8.5
Sulfolobus
Sulfolobus acidocaldarius DSM 639
Metallosphaera
Metallosphaera sedula DSM 5348
Acidianus
Acidianus hospitalis
Pyrobaculum
Pyrobaculum aerophilum
Pyrobaculum islandicum
Pyrobaculum calidifontis
Pyrobaculum arsenaticum
Pyrobaculum neutrophilum
Caldivirga
Caldivirga maquilingensis
Thermoproteus
Thermoproteus uzoniensis
Vulcanisaeta
Vulcanisaeta distributa
Thermofilum
Thermofilum pendens
Acidilobus
Acidilobus saccharovorans
Fervidicoccus
Fervidicoccus fontis
Korarchaeum
Candidatus Korarchaeum cryptofilum
Nitrososphaerota
Nitrosopumilus
Nitrosopumilus maritimus
Nitrososphaera
Candidatus Nitrososphaera gargensis
Cenarchaeum
Cenarchaeum symbiosum
Nanobdellota
Nanoarchaeum
Nanoarchaeum equitans