+D GENES KO #

  KEGG Orthology (KO) - Chlamydia trachomatis 434/Bu

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ctb00010] D CTL0633 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0459 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CTL0467 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTL0582 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTL0767 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTL0062 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTL0091 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTL0586 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTL0497 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTL0498 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTL0499 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0079 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ctb00020] D CTL0310 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CTL0657 sucB; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0311 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0194 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CTL0193 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTL0855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTL0854 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTL0630 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTL0079 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CTL0497 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTL0498 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTL0499 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ctb00030] D CTL0633 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTL0437 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTL0438 devB; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CTL0319 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTL0376 araD; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTL0119 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CTL0565 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CTL0465 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CTL0467 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0459 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D CTL0376 araD; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:ctb00051] D CTL0547 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0459 pfkA_2; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CTL0467 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTL0582 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ctb00500] D CTL0750 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CTL0167 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CTL0245 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTL0500 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CTL0342 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CTL0298 putative glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D CTL0633 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ctb00520] D CTL0188 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTL0187 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CTL0893 glmU; glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CTL0084 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D CTL0715 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTL0203 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTL0633 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTL0547 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTL0750 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ctb00620] D CTL0497 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTL0498 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTL0499 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0586 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTL0517 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTL0378 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTL0379 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTL0545 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTL0630 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTL0079 pckA; phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ctb00630] D CTL0630 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTL0691 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0534 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:ctb00640] D CTL0594 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0517 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTL0378 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTL0379 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTL0545 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTL0193 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTL0194 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CTL0855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTL0854 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00660 C5-Branched dibasic acid metabolism D CTL0193 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTL0194 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D CTL0582 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ctb00190] D CTL0855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTL0854 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTL0268 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CTL0269 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CTL0560 atpA; V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CTL0559 atpB; V-type sodium ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CTL0558 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CTL0562 atpE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CTL0557 atpI; V-type sodium ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CTL0556 atpK; V-type sodium ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CTL0141 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ctb00680] D CTL0691 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTL0630 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTL0467 dhnA; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0091 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:ctb00920] D CTL0143 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTL0694 Putative oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ctb00061] D CTL0517 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTL0378 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTL0379 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTL0545 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTL0488 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CTL0490 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTL0491 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTL0139 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTL0489 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTL0794 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTL0359 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ctb00561] D CTL0176 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTL0182 plsX; Fatty acid/phospholipid synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTL0144 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTL0713 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ctb00564] D CTL0083 gpdA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CTL0176 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTL0144 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTL0713 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTL0711 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CTL0198 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTL0068 psdD; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CTL0166 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CTL0757 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ctb00230] D CTL0470 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTL0312 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTL0762 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTL0869 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CTL0285 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CTL0199 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTL0200 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTL0120 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CTL0383 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ctb00240] D CTL0047 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CTL0762 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTL0603 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CTL0435 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CTL0712 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CTL0470 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTL0294 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CTL0199 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTL0200 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTL0440 tdk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CTL0544 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ctb00250] D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTL0188 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ctb00260] D CTL0616 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTL0617 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTL0691 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTL0091 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0534 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D CTL0198 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTL0424 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTL0423 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ctb00270] D CTL0312 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTL0616 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTL0617 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTL0630 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:ctb00280] D CTL0142 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D CTL0594 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ctb00290] D CTL0142 ldh; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:ctb00300] D CTL0616 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTL0617 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTL0615 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTL0618 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CTL0689 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CTL0646 dapL; DAP (diaminopimelic acid) aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CTL0521 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTL0125 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ctb00310] D CTL0657 sucB; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0311 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D CTL0657 sucB; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0311 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ctb00400] D CTL0637 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTL0623 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CTL0624 aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D CTL0621 aroL; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CTL0620 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CTL0622 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CTL0424 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTL0423 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CTL0635 phnP; metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ctb00450] D CTL0056 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CTL0354 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTL0287 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CTL0691 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ctb00470] D CTL0131 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTL0127 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTL0689 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:ctb00480] D CTL0301 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTL0319 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTL0437 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ctb00540] D CTL0793 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CTL0795 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CTL0495 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CTL0668 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CTL0659 Tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CTL0656 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CTL0024 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CTL0434 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CTL0460 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CTL0265 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ctb00541] D CTL0547 mrsA; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTL0893 glmU; glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:ctb00550] D CTL0715 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTL0203 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTL0131 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTL0127 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTL0521 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTL0125 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTL0710 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTL0126 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTL0130 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTL0522 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTL0813 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ctb00730] D CTL0090 Cysteine desulfurase (EC 2.8.1.7) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0510 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0585 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTL0383 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ctb00740] D CTL0100 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTL0099 ribD; Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTL0101 ribH; Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CTL0662 ribC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CTL0348 ribF; riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CTL0472 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:ctb00760] D CTL0470 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:ctb00770] D CTL0753 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CTL0355 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:ctb00780] D CTL0139 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTL0489 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTL0794 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTL0359 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CTL0146 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CTL0094 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ctb00785] D CTL0821 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CTL0761 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTL0537 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0497 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTL0498 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTL0499 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTL0310 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CTL0657 sucB; lipoamide acyltransferase component (E2) of branched-chain alpha-keto acid dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0311 sucB; dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTL0594 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTL0534 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ctb00790] D CTL0878 folX; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CTL0877 folP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D CTL0876 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTL0875 conserved hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CTL0100 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTL0581 trpC; N-(5'-phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:ctb00670] D CTL0876 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTL0334 folD; methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CTL0691 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTL0792 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTL0017 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ctb00860] D CTL0705 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTL0031 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CTL0462 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTL0001 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTL0551 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CTL0692 conserved hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CTL0116 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CTL0115 hemN; coproporphyrinogen oxidase (NAD) K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CTL0114 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CTL0746 hemZ; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ctb00130] D CTL0471 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CTL0472 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CTL0687 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CTL0685 conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CTL0136 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ctb00900] D CTL0585 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTL0327 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CTL0722 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CTL0173 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CTL0693 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CTL0313 gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CTL0234 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CTL0472 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CTL0892 ispA; dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTL0710 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CTL0119 tktB; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ctb00261] D CTL0616 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTL0617 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTL0615 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTL0618 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CTL0490 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTL0489 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTL0359 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CTL0488 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CTL0624 aroE; shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CTL0340 putative decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D CTL0472 putative flavoprotein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ctb03020] D CTL0567 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTL0566 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTL0769 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ctb03010] D CTL0353 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTL0049 rpsB; SSU ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CTL0784 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTL0890 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTL0774 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CTL0170 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CTL0697 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTL0777 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTL0381 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CTL0695 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CTL0770 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTL0698 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTL0771 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTL0155 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D CTL0215 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D CTL0281 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D CTL0781 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CTL0171 rpsR; SSU ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CTL0786 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CTL0881 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D CTL0596 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D CTL0570 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CTL0787 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTL0790 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTL0789 rplD; LSU ribosomal protein L1E K02926 RP-L4; large subunit ribosomal protein L4 D CTL0778 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTL0776 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CTL0568 rplL; LSU ribosomal protein L12P (L7/L12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTL0172 rplI; LSU ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTL0569 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTL0571 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTL0380 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTL0780 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTL0773 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTL0783 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTL0768 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CTL0775 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTL0283 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTL0207 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTL0677 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CTL0785 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CTL0788 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D CTL0779 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTL0168 rplY; LSU ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CTL0676 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTL0341 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D CTL0782 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CTL0277 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CTL0181 rpmF; LSU ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CTL0405 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D CTL0153A rnpA; ribonuclease P protein component K02914 RP-L34; large subunit ribosomal protein L34 D CTL0206 rpmI; LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D CTL0154 rpmJ; LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D 16S_rRNA-1 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ctb00970] D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val D CTL0705 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTL0258 gatA; aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTL0259 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTL0257 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTL0118 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTL0804 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTL0165 glyQ; glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTL0844 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTL0098 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTL0151 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTL0287 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTL0792 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTL0554 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTL0461 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTL0274 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTL0150 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTL0714 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTL0649 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTL0805 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTL0208 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTL0736 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTL0318 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTL0848 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ctb03060] D CTL0772 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D CTL0573 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D CTL0606 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D CTL0708 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D CTL0110 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CTL0503 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTL0070 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTL0280 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTL0192 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D CTL0275 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTL0665 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ctb04122] D CTL0090 Cysteine desulfurase (EC 2.8.1.7) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0510 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0539 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:ctb03018] D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTL0214 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTL0654 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTL0752 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0652 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D CTL0365 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTL0667 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CTL0073 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ctb03030] D CTL0798 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0513 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0807 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTL0439 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0588 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0303 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTL0331 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTL0759 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTL0162 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0284 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTL0263 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ctb03410] D CTL0066 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTL0871 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTL0362 putative DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTL0889 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTL0707 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ctb03420] D CTL0117 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTL0587 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTL0849 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTL0159 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTL0872 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ctb03430] D CTL0160 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D CTL0838 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CTL0872 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTL0583 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTL0583A xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTL0707 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0807 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTL0331 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTL0439 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0588 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0303 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTL0798 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0513 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ctb03440] D CTL0707 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0330 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D CTL0730 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D CTL0492 recR; recombination protein K06187 recR; recombination protein RecR D CTL0018 recA; recombinase A K03553 recA; recombination protein RecA D CTL0763 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CTL0296 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTL0764 ruvC; endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTL0007 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CTL0008 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CTL0288 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTL0020 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTL0807 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTL0331 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTL0439 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0588 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0303 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTL0798 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0513 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0147 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D CTL0175 ptr; exported insulinase/protease K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ctb02010] D CTL0636 artJ; arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CTL0384 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D CTL0385 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CTL0450 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTL0451 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTL0452 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTL0454 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTL0453 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTL0672 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D CTL0674 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D CTL0673 metal transporter, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTL0323 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CTL0325 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D CTL0326 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D CTL0324 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CTL0613 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D CTL0406 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D CTL0407 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CTL0211 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D CTL0210 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D CTL0022 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:ctb02060] D CTL0590 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTL0591 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CTL0542 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTL0543 ptsN_2; PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ctb03070] D CTL0043 Type III secretion structural protein (outer membrane ring) K03219 yscC; type III secretion protein C D CTL0344 lcrE; low calcium response protein E (TTSS effector protein) K04058 yscW; type III secretion protein W D CTL0822 sctJ; type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D CTL0825 sctR; type III secretion system, membrane protein K03226 yscR; type III secretion protein R D CTL0826 sctS; type III secretion system, membrane protein K03227 yscS; type III secretion protein S D CTL0827 sctT; type III secretion system, membrane protein K03228 yscT; type III secretion protein T D CTL0346 sctU; type III secretion system inner membrane protein K03229 yscU; type III secretion protein U D CTL0345 lcrD; low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D CTL0038 sctN; ATP synthase (predicted TTSS protein) K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CTL0824 sctL; type III secretion system protein K03223 yscL; type III secretion protein L D CTL0835 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CTL0833 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CTL0834 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CTL0708 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D CTL0573 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D CTL0606 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D CTL0772 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D CTL0110 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CTL0503 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTL0070 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTL0192 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D CTL0280 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ctb02020] D CTL0195 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTL0317 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D CTL0527 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0501 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0806 uhpC; putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CTL0727 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CTL0728 atoC; two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CTL0873 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CTL0268 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CTL0269 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ctb02024] D CTL0468 xasA; glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D CTL0099 ribD; Riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTL0450 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTL0451 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTL0452 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTL0454 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTL0453 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTL0427 oppA2; Oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0394 oppA; oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0741 oppA4; oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0740 oppB2; oligopeptide transport system membrane permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTL0739 oppC2; oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTL0059 dppD; ABC transport protein, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTL0058 dppF; ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTL0503 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTL0708 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D CTL0573 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D CTL0606 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D CTL0772 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D CTL0110 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CTL0070 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTL0192 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D CTL0280 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CTL0041 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:ctb02040] D CTL0088 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CTL0087 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTL0086 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTL0041 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D CTL0316 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D CTL0879 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CTL0873 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CTL0317 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ctb01501] D CTL0450 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTL0451 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTL0452 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTL0454 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTL0453 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTL0522 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ctb01502] D CTL0131 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTL0125 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTL0126 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTL0130 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ctb01503] D CTL0520 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTL0195 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTL0793 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ctb01000] C 01001 Protein kinases [BR:ctb01001] D CTL0553 pknD; Serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTL0811 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CTL0727 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ctb01009] D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0511 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ctb01002] D CTL0665 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CTL0188 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTL0506 inner membrane protein K07052 K07052; CAAX protease family protein D CTL0367 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CTL0175 ptr; exported insulinase/protease K01408 IDE; insulysin [EC:3.4.24.56] D CTL0196 metalloprotease-insulinase K06972 PITRM1; presequence protease [EC:3.4.24.-] D CTL0301 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTL0224 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CTL0837 pepP; proline dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CTL0213 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTL0328 putative protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CTL0195 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTL0813 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTL0075 clpP; ATP-dependent Clp protease proteolytic component K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTL0690 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTL0598 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CTL0275 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTL0700 tsp; carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:ctb01003] D CTL0167 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ctb01005] D CTL0793 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CTL0668 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CTL0795 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CTL0495 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CTL0659 Tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CTL0265 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CTL0460 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CTL0024 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CTL0434 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CTL0656 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ctb01011] D CTL0715 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTL0203 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTL0131 murC; UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTL0127 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTL0521 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTL0126 mraY; phospho-N-acetylmuramoyl-pentapeptide-transfera se K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTL0130 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTL0888 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase D CTL0522 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTL0813 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTL0520 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ctb01004] D CTL0490 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTL0491 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTL0139 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTL0489 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTL0794 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTL0359 fabI; enoyl-acyl-carrier protein reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CTL0176 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTL0182 plsX; Fatty acid/phospholipid synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTL0144 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTL0713 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ctb01006] D CTL0892 ispA; dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTL0710 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTL0135 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTL0471 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:ctb01007] D CTL0705 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTL0318 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTL0848 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTL0151 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTL0714 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTL0287 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTL0274 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTL0554 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTL0461 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTL0150 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTL0804 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTL0805 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTL0098 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTL0649 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTL0844 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTL0118 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTL0208 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTL0736 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTL0005 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTL0646 dapL; DAP (diaminopimelic acid) aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CTL0146 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CTL0462 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ctb03000] D CTL0094 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CTL0422 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CTL0057 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTL0650 Putative transcriptional regulatory protein K03705 hrcA; heat-inducible transcriptional repressor D CTL0463 conserved hypothetical protein K07735 algH; putative transcriptional regulator D CTL0664 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTL0663 transcriptional repressor K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:ctb03021] D CTL0769 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTL0567 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTL0566 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTL0879 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CTL0873 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CTL0317 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D CTL0352 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CTL0204 nusB; Antitermination protein K03625 nusB; transcription antitermination protein NusB D CTL0572 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D CTL0851 rbsU; sigma regulatory family protein-PP2C phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CTL0134 rbsV; anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist D CTL0811 rsbW; sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CTL0664 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTL0752 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ctb03019] D CTL0177 cafE; ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-] D CTL0549 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTL0654 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTL0214 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTL0752 rho; transcription termination factor rho K03628 rho; transcription termination factor Rho D CTL0457 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTL0652 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D CTL0365 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTL0667 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CTL0073 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:ctb03011] D CTL0353 rpsA; SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D CTL0049 rpsB; SSU ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CTL0784 rpsC; SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CTL0890 rpsD; SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D CTL0774 rpsE; SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CTL0170 rpsF; SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D CTL0697 rpsG; SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D CTL0777 rpsH; SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CTL0381 rpsI; SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D CTL0695 rpsJ; SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CTL0770 rpsK; SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D CTL0698 rpsL; SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D CTL0771 rpsM; SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CTL0155 rpsN; SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D CTL0215 rpsO; SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D CTL0281 rpsP; SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D CTL0781 rpsQ; SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CTL0171 rpsR; SSU ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CTL0786 rpsS; SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D CTL0881 rpsT; SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D CTL0596 rpsU; SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D CTL0570 rplA; LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CTL0787 rplB; LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CTL0790 rplC; LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CTL0789 rplD; LSU ribosomal protein L1E K02926 RP-L4; large subunit ribosomal protein L4 D CTL0778 rplE; LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CTL0776 rplF; LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D CTL0172 rplI; LSU ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTL0569 rplJ; LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D CTL0571 rplK; LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CTL0568 rplL; LSU ribosomal protein L12P (L7/L12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTL0380 rplM; LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D CTL0780 rplN; LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CTL0773 rplO; LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CTL0783 rplP; LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D CTL0768 rplQ; LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D CTL0775 rplR; LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CTL0283 rplS; LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D CTL0207 rplT; LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D CTL0677 rplU; LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D CTL0785 rplV; LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D CTL0788 rplW; LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D CTL0779 rplX; LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CTL0676 rpmA; LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D CTL0341 rpmB; LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D CTL0782 rpmC; LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CTL0277 rpmE; LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D CTL0181 rpmF; LSU ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CTL0405 rpmG; LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D CTL0153A rnpA; ribonuclease P protein component K02914 RP-L34; large subunit ribosomal protein L34 D CTL0206 rpmI; LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D CTL0154 rpmJ; LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D CTL0168 rplY; LSU ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D 16S_rRNA-1 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ctb03009] D CTL0549 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTL0675 putative nucleotide-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D CTL0664 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTL0352 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CTL0204 nusB; Antitermination protein K03625 nusB; transcription antitermination protein NusB D CTL0572 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D CTL0608 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CTL0748 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CTL0524 mraW; S-adenosyl-L-methionine-dependent methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CTL0304 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CTL0661 N6-adenine-specific DNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CTL0092 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CTL0361 tRNA pseudouridine synthase A K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CTL0027 sfhB; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CTL0177 cafE; ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-] D CTL0436 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CTL0072 engA; GTP-binding protein K03977 engA; GTPase D CTL0634 putative nucleotide-binding protein K03665 hflX; GTPase D CTL0392 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTL0350 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CTL0138 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D CTL0681 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D CTL0347 GTP-binding protein K06942 ychF; ribosome-binding ATPase D CTL0178 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ctb03016] D CTL0600 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CTL0705 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTL0649 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTL0274 ileS; isoleucyl-tRNA synthetase, mupirocin resistant K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTL0461 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTL0287 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTL0714 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTL0150 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTL0804 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTL0118 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTL0844 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTL0098 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTL0151 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTL0554 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTL0805 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTL0208 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTL0736 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTL0318 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTL0848 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTL0641 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTL0201 trmB; tRNA (m(7)G46) methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CTL0723 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CTL0349 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CTL0090 Cysteine desulfurase (EC 2.8.1.7) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0510 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0392 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTL0135 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTL0067 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CTL0760 gidA; tRNA uridine 5-carboxymethylase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTL0143 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTL0153 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CTL0165 glyQ; glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTL0216 Cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CTL0012 putative oxidoreductase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CTL0282 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CTL0802 putatve rRNA methylase (SpoU family) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CTL0660 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CTL0539 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTL0469 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CTL0445 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CTL0212 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CTL0449 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CTL0799 putative nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CTL0654 vacB; exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTL0214 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ctb03012] D CTL0351 infA; bacterial protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2 D CTL0205 infC; bacterial protein translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3 D CTL0048 tsf; translation elongation factor TS K02357 tsf; elongation factor Ts D CTL0574 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CTL0696 fusA; translation elongation factor G K02355 fusA; elongation factor G D CTL0278 prfA; bacterial peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CTL0046 rrf; ribosome recycling factor K02838 frr; ribosome recycling factor D CTL0279 peptide release factor-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CTL0169 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CTL0575 infA2; bacterial protein translation initiation factor 1 (IF-1) K02518 infA; translation initiation factor IF-1 D CTL0377 efp; translation elongation factor P K02356 efp; elongation factor P D CTL0121 efp; translation elongation factor P K02356 efp; elongation factor P D CTL0719 prfB; bacterial peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:ctb03110] D CTL0368 clpB; chaperone-protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CTL0538 clpC; ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CTL0074 clpX; ATP-dependent Clp protease, ATP-binding component K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CTL0652 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D CTL0365 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTL0595 dnaJ; heat shock chaperone protein K03686 dnaJ; molecular chaperone DnaJ D CTL0651 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D CTL0366 groES; 10 kDa chaperonin GroES K04078 groES; chaperonin GroES D CTL0195 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTL0213 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTL0801 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ctb04131] D CTL0762 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTL0767 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTL0091 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTL0586 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ctb03032] D CTL0527 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0501 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0759 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTL0162 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0807 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTL0331 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTL0303 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTL0798 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0513 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0439 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0588 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0284 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTL0263 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTL0441 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTL0029 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTL0442 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTL0030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTL0011 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ctb03036] D CTL0549 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTL0527 dnaA2; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0501 dnaA; Chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTL0522 pbp; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTL0108 ftsK; Cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CTL0129 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW D CTL0520 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTL0078 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CTL0095 cell cycle protein K05837 rodA; rod shape determining protein RodA D CTL0845 minD; Chromosome partitioning ATPase (ParA family) K03496 parA; chromosome partitioning protein D CTL0057 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTL0760 gidA; tRNA uridine 5-carboxymethylase K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTL0601 xerC; DNA recombination protein K03733 xerC; integrase/recombinase XerC D CTL0243 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:ctb03400] D CTL0738 putative DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CTL0871 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTL0362 putative DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTL0066 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTL0544 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTL0889 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTL0707 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTL0401 dnlJ; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTL0587 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTL0849 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTL0159 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTL0872 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTL0567 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTL0566 rpoC; DNA-directed RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTL0769 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTL0117 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTL0160 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D CTL0838 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CTL0583 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTL0583A xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTL0807 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTL0331 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTL0303 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTL0798 dnaQ2; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0513 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTL0439 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0588 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0007 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CTL0008 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CTL0288 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTL0020 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTL0018 recA; recombinase A K03553 recA; recombination protein RecA D CTL0763 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CTL0296 ruvB; Holliday junction ATP-dependent DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTL0764 ruvC; endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTL0147 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CTL0550 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms D CTL0330 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF D CTL0730 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D CTL0492 recR; recombination protein K06187 recR; recombination protein RecR D CTL0441 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTL0029 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTL0442 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTL0030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTL0011 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CTL0199 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTL0200 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ctb03029] D CTL0351 infA; bacterial protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2 D CTL0205 infC; bacterial protein translation initiation factor 3 (IF-3) K02520 infC; translation initiation factor IF-3 D CTL0048 tsf; translation elongation factor TS K02357 tsf; elongation factor Ts D CTL0574 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CTL0696 fusA; translation elongation factor G K02355 fusA; elongation factor G D CTL0318 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTL0461 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTL0804 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTL0714 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTL0258 gatA; aspartyl-glutamyl-tRNA(Asn-Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTL0259 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTL0257 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTL0300 ssb; single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D CTL0493 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D CTL0652 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D CTL0651 grpE; HSP-70 Cofactor K03687 GRPE; molecular chaperone GrpE D CTL0365 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTL0366 groES; 10 kDa chaperonin GroES K04078 groES; chaperonin GroES D CTL0595 dnaJ; heat shock chaperone protein K03686 dnaJ; molecular chaperone DnaJ D CTL0090 Cysteine desulfurase (EC 2.8.1.7) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0510 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0503 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ctb02000] D CTL0227 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CTL0432 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CTL0636 artJ; arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CTL0384 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D CTL0385 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CTL0747 fliY; glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTL0450 oppA3; oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTL0451 oppB; oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTL0452 oppC; oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTL0454 oppF; oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTL0453 oppD; oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTL0427 oppA2; Oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0394 oppA; oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0741 oppA4; oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTL0740 oppB2; oligopeptide transport system membrane permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTL0739 oppC2; oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTL0059 dppD; ABC transport protein, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTL0058 dppF; ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTL0672 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D CTL0674 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D CTL0673 metal transporter, ATP-binding component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTL0323 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CTL0325 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D CTL0326 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D CTL0324 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CTL0613 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D CTL0211 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D CTL0210 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D CTL0022 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CTL0406 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D CTL0407 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CTL0054 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CTL0806 uhpC; putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CTL0590 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTL0591 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CTL0542 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTL0543 ptsN_2; PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTL0446 mgtE; magnesium transport protein K06213 mgtE; magnesium transporter D CTL0861 macromolecule transport protein K03559 exbD; biopolymer transport protein ExbD D CTL0860 exbB; macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ D CTL0508 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTL0509 unnamed protein product K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTL0682 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTL0050 ompA; major outer membrane protein K03162 ompA; major outer membrane protein D CTL0082 ompB; outer membrane protein B K08719 K08719; outer membrane protein B D CTL0493 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D CTL0628 Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CTL0468 xasA; glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D CTL0189 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D CTL0190 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D CTL0231 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CTL0888 mviN; putative virulence protein K03980 murJ; putative peptidoglycan lipid II flippase D CTL0395 exported protein K09125 yhhQ; queuosine precursor transporter D CTL0225 putative integral membrane protein K05595 marC; multiple antibiotic resistance protein D CTL0129 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW D CTL0863 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CTL0862 tolB; outer membrane component of membrane transport system K03641 tolB; TolB protein C 02044 Secretion system [BR:ctb02044] D CTL0835 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CTL0834 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CTL0833 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CTL0013 integral membrane protein K02221 yggT; YggT family protein D CTL0043 Type III secretion structural protein (outer membrane ring) K03219 yscC; type III secretion protein C D CTL0822 sctJ; type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D CTL0824 sctL; type III secretion system protein K03223 yscL; type III secretion protein L D CTL0038 sctN; ATP synthase (predicted TTSS protein) K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CTL0825 sctR; type III secretion system, membrane protein K03226 yscR; type III secretion protein R D CTL0826 sctS; type III secretion system, membrane protein K03227 yscS; type III secretion protein S D CTL0827 sctT; type III secretion system, membrane protein K03228 yscT; type III secretion protein T D CTL0346 sctU; type III secretion system inner membrane protein K03229 yscU; type III secretion protein U D CTL0345 lcrD; low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D CTL0344 lcrE; low calcium response protein E (TTSS effector protein) K04058 yscW; type III secretion protein W D CTL0316 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D CTL0088 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CTL0087 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTL0086 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTL0041 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D CTL0070 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTL0708 secF; protein translocase (secFG fusion protein) K12257 secDF; SecD/SecF fusion protein D CTL0573 secE; protein translocase subunit K03073 secE; preprotein translocase subunit SecE D CTL0606 secG; preprotein translocase K03075 secG; preprotein translocase subunit SecG D CTL0772 secY; protein translocase subunit K03076 secY; preprotein translocase subunit SecY D CTL0280 ffh; signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTL0192 ftsY; Cell Division Protein K03110 ftsY; fused signal recognition particle receptor D CTL0110 preprotein translocase K03210 yajC; preprotein translocase subunit YajC D CTL0503 oxaA; inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ctb02042] D CTL0508 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTL0509 unnamed protein product K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTL0682 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ctb02022] D CTL0727 atoS; two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CTL0728 atoC; two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:ctb02035] D CTL0087 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTL0086 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTL0316 flhA; Flagellar biosynthesis protein (export) K02400 flhA; flagellar biosynthesis protein FlhA D CTL0041 sctQ; Type III secretion component, basal body K02417 fliN; flagellar motor switch protein FliN D CTL0088 fliF; flagellar M-Ring Protein K02409 fliF; flagellar M-ring protein FliF D CTL0317 fliA; RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ctb04812] D CTL0078 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CTL0845 minD; Chromosome partitioning ATPase (ParA family) K03496 parA; chromosome partitioning protein D CTL0057 parB; putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ctb04147] D CTL0850 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTL0767 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTL0062 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTL0586 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTL0866 ahpC; thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CTL0365 hsp60_1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTL0652 dnaK; chaperone protein K04043 dnaK; molecular chaperone DnaK D CTL0633 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTL0574 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D CTL0641 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTL0383 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTL0245 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTL0001 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTL0820 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTL0437 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTL0582 tpiS; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTL0091 pgmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ctb02048] D CTL0078 mreB; Cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CTL0705 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTL0090 Cysteine desulfurase (EC 2.8.1.7) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTL0510 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ctb03100] D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D tRNA-Asn tRNA-Asn K14220 tRNA-Asn; tRNA Asn D tRNA-Asp tRNA-Asp K14221 tRNA-Asp; tRNA Asp D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys D tRNA-Gln tRNA-Gln K14223 tRNA-Gln; tRNA Gln D tRNA-Glu tRNA-Glu K14224 tRNA-Glu; tRNA Glu D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D tRNA-His tRNA-His K14226 tRNA-His; tRNA His D tRNA-Ile tRNA-Ile K14227 tRNA-Ile; tRNA Ile D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D tRNA-Lys tRNA-Lys K14229 tRNA-Lys; tRNA Lys D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val D 16S_rRNA-1 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 16S_rRNA-2 16s_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D 23S_rRNA-1 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 23S_rRNA-2 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D 5S_rRNA-1 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D 5S_rRNA-2 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CTL0874 conserved hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CTL0149 protein disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D CTL0796 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CTL0504 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CTL0333 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CTL0267 putative integral membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CTL0044 aspC; aspartate kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CTL0858 putative hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CTL0607 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CTL0803 mip; peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D CTL0002 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CTL0530 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CTL0531 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CTL0532 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CTL0533 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CTL0109 dmpP; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CTL0096 cation transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CTL0089 conserved hypothetical protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CTL0391 putative phospholipase-carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D CTL0045 conserved hypothetical protein K19411 mcsA; protein arginine kinase activator D CTL0076 tig; trigger factor (chaperone) K03545 tig; trigger factor D CTL0332 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CTL0197 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CTL0631 ltuA; late transcription unit A protein K08274 ltuA; late transcription unit A protein D CTL0336 ltuB; late transcription unit B protein K08275 ltuB; late transcription unit B protein D CTL0589 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CTL0321 ADP,ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CTL0756 putative nucleotide transport protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CTL0061 low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D CTL0483 sodium-dependent amino acid transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTL0658 gltT; Sodium:dicarboxylate symport protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D CTL0666 Sodium/alanine symporter protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTL0104 dagA; Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTL0817 brnQ; branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTL0456 sodium:sulfate symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CTL0270 conserved hypothetical protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CTL0494 ompH; Outer membrane protein K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D CTL0055 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D CTL0387 conserved hypothetical protein K07058 K07058; membrane protein D CTL0686 conserved hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D CTL0514 conserved hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D CTL0891 conserved hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D CTL0610 conserved hypothetical protein K06888 K06888; uncharacterized protein D CTL0458 conserved hypothetical protein K06889 K06889; uncharacterized protein D CTL0404 putative exported protein K06889 K06889; uncharacterized protein D CTL0191 putative membrane transport protein K06890 K06890; uncharacterized protein D CTL0132 conserved hypothetical protein K06960 K06960; uncharacterized protein D CTL0028 conserved hypothetical protein K06960 K06960; uncharacterized protein D CTL0053 conserved hypothetical protein K07033 K07033; uncharacterized protein D CTL0396 protein translocase K07039 K07039; uncharacterized protein D CTL0721 putative metallo-phosphoesterase K07098 K07098; uncharacterized protein D CTL0749 putative phosphohydrolase K07099 K07099; uncharacterized protein D CTL0106 SET domain containing protein K07117 K07117; uncharacterized protein D CTL0577 conserved hypothetical protein K07125 K07125; uncharacterized protein D CTL0655 conserved hypothetical protein K07164 K07164; uncharacterized protein D CTL0734 conserved hypothetical protein K08998 K08998; uncharacterized protein D CTL0464 conserved hypothetical protein K08999 K08999; uncharacterized protein D CTL0644 conserved hypothetical protein K09131 K09131; uncharacterized protein D CTL0256 putative membrane protein K09779 K09779; uncharacterized protein D CTL0060 conserved hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024