+D Protein KO
#
Membrane Trafficking - Escherichia coli K-12 W3110
%
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AExocytosis
B Calcium ion-dependent exocytosis
C Synaptotagmins
C Septins
C DOC-2 proteins
C Acrosomal exocytosis proteins
C Phospholipases
C Kinases and associated proteins
D JW2502 ndk; multifunctional nucleoside diphosphate kinase, apyrimidinic endonuclease, and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
C Others
B Small GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
C Rho GTPases
C Other small GTPases and associated proteins
B Tethering complex
C Exocyst complex
C Exocyst complex assembly proteins
B Others
C Exomer complex
C Others
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ASNARE
B Syntaxin (Qa)
C Stx-PM
C Stx-Endo
C Stx-TGN / EE
C Stx-cisGolgi
C Stx-sER
C Stx-rER
B SNAP-25[N] (Qb)
C Vti1
C NPSN
C Gos1 (Gos28)
C Bos1 / Membrin
C Sec20
B SNAP-25[C] (Qc)
C STX6
C STX8
C STX10
C Bet1
C Sft1
C Syp7
C Use1
B SNAP-25 (Qb,c)
C SNAP-23
C SNAP-25
C SNAP-29
C SNAP-47
B VAMP, Ykt6, Sec22 (R)
C VAMP
C Ykt6
C Sec22
C Tomosyn
C Putative SNAREs
B SNARE associated proteins
C Syntaxin-binding proteins
C Palmitoyltransferases
C Others
#
AEndocytosis
B Clathrin-mediated endocytosis
C Clathrin
C Dynamin
C AP-2 complex
C Other core components
C Low-density lipoprotein receptor (LDLR) family proteins
C LDLR adaptor proteins
C GPCR adaptor proteins
C Receptor tyrosine kinase (RTK) adaptor proteins
C Inositol 5-phosphatases
C Kinases
C Ubiquitin E3 ligases
C Others
B Lipid raft mediated endocytosis
C Caveolin-mediated endocytosis
C Flotillin-dependent endocytosis
C GRAF1-dependent endocytosis
C Arf6-dependent endocytosis
C RhoA-dependent endocytosis
B Phagocytosis
C Fc receptors
C Integrins (complement receptors)
C Opsonins
C Toll-like receptors
C C-lectin receptors
C Scavenger receptors
C Coronins
C Others
B Macropinocytosis
C Ras GTPases
C Kinases
C Phospholipase C
C Sorting nexins
C Others
B Bin/Amphiphysin/Rvs (BAR) family proteins
C N-BAR proteins
C F-BAR proteins
C I-BAR proteins
B Rab GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
B Arf GTPases and associated proteins
C Arf GTPases
C Arf associated proteins
B Others
C Fucosyltransferase
C EFR3-PI4KIII alpha complex and associated proteins
C Insulin-like growth factor-binding proteins
C Others
#
AEndosome - Lysosome transport
B Rab GTPases and associated proteins
C Rab GTPases
C Retromer subcomplex
C FTS/Hook/FHIP (FHF) complex
C Rab associated proteins
B Arf GTPases and associated proteins
C Arf GTPases
C BLOC-one-related complex (BORC)
C N-acetyl transferase complex C (NatC)
C Other Arf associated proteins
B Endosomal sorting complexes required for transport (ESCRT)
C ESCRT-0 complex
C ESCRT-I complex
C ESCRT-II complex
C ESCRT-III complex
C ESCRT associated proteins
B Tethering complex
C CORVET complex
C Hops complex
B Acidification regulators
C Rabconnectin-3 complex
C RAVE complex
B Others
C AP-3 complex
C BLOC-1 complex
C BLOC-1 complex (yeast)
C BLOC-2 complex
C BLOC-3 complex
C Ferlins
C Others
#
AProtein recycling
B Rab GTPases and associated proteins
C Rab GTPases
C Rab4 associated proteins
C Rab11 associated proteins
C Other Rab GTPase associated proteins
B Others
C Glutamate receptor-interacting proteins (GRIPs)
C GRIP associated proteins
C EARP complex
C WASH complex
C Retriever complex
C Others
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AEndosome - Golgi transport
B Rab GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
B Arf GTPases and associated proteins
C Arf GTPases
C Arf GTPase associated proteins
B Tethering complex
C Conserved oligomeric Golgi (COG) complex
C GARP complex
C TRAPP complex II
B Others
C AP-1 complex
C AP-3 complex
C AP-4 complex
C GGA
C Aftiphilin/p200/gamma-synergin complex
C Others
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AEndoplasmic reticulum (ER) - Golgi transport
B Forward pathways
C Coat protein complex II (COP-II)
C TRAPP complex I
C p24 family proteins
C PDI family proteins
C Rab GTPases
C Rab associated proteins
C ER-Golgi intermediate compartment (ERGIC) proteins
B Retrieval pathways
C Coat protein complex I (COP-I)
C NRZ (DSL1) complex
C Golgi to ER traffic proteins (GET)
C Rab GTPases
C Rab associated proteins
B Others
C Oxysterol-binding proteins
C FXYD proteins
C YIPF proteins
C ER membrane protein complex
C SEC61 complex
C TRAP complex
C Multi-pass translocon (MPT) complex
C Post-GPI attachment to proteins factors (PGAP)
C Others
#
AAutophagy
B Autophagosome formation proteins
C ULK complex
C Atg1 complex
C PI3K complex
C ATG9 transmembrane protein
C Atg18-Atg2 complex
C Atg12 conjugation proteins
C Atg8 conjugation proteins
B Cytoplasm to vacuolar targeting (CVT) pathway
C Selective cargos
C Cargo receptors
C Scaffold protein
C Other Cvt associated proteins
B Mitophagy
C Cargo receptors
C Scaffold proteins
C PINK1-Parkin associated proteins
C Other mitophagy associated proteins
B Pexophagy
C Selective cargos
C Cargo receptors
C Other pexophagy associated proteins
B Aggrephagy
C Cargo receptors
C Scaffold proteins
C Other aggrephagy associated proteins
B Xenophagy
C Cargo receptors
C Other xenophagy associated proteins
B Chaperone mediated autophagy (CMA)
C Selective cargos
D JW1768 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW0738 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW1666 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JW1843 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
C Cargo receptors
C Chaperones
D JW0462 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
C Co-chaperones
C Other CMA associated proteins
B Other autophagy associated proteins
C RNautophagy/DNautophagy
C Micronucleophagy
C Midbophagy
C Glycophagy
C TRIM-directed selective autophagy
C ER-mitochondria tethering complex
C mTORC1 complex
C mTORC2 complex
C SEACIT/GATOR1 complex
C SEACAT/GATOR2 complex
C KICSTOR complex
C Rab GTPases
C Rab associated proteins
C Others
#
AOthers
B NADPH oxidases (Nox) and associated proteins
C NADPH oxidases
C Nox associated proteins
B Actin-binding proteins
C Myosins
C Arp2/3 complex
C Nucleation-promoting factors (NPFs)
C Others
B Mucins
C Membrane bound mucins
C Secretory mucins
B Specific organelles associated proteins
C Melanosome
C Auto phagosome
C Lipid droplets
C Mitochondrion
B Rho GTPase associated proteins
C Rho GTPase-activating proteins
C Rho guanine nucleotide exchange factors (GEFs)
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 13, 2024