+D GENES KO
#
KEGG Orthology (KO) - Haemophilus influenzae F3031 (nontypeable)
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hif00010]
D HIBPF_09810 glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_10450 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HIBPF_17190 fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HIBPF_18100 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HIBPF_17060 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HIBPF_00010 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HIBPF_18090 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HIBPF_15540 phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HIBPF_09780 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HIBPF_06090 pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HIBPF_06080 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_14900 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HIBPF_08330 predicted enzyme related to aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D HIBPF_15010 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HIBPF_04750 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:hif00020]
D HIBPF_05790 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HIBPF_05800 dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_10670 succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HIBPF_10680 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HIBPF_14730 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HIBPF_14740 fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HIBPF_14750 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D HIBPF_14760 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D HIBPF_07650 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HIBPF_10540 malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HIBPF_15010 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HIBPF_06090 pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HIBPF_06080 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hif00030]
D HIBPF_09810 glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HIBPF_17700 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HIBPF_17710 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D HIBPF_17740 gluconate-6-phosphate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HIBPF_17620 D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HIBPF_12350 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HIBPF_11480 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HIBPF_18650 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HIBPF_11570 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HIBPF_18270 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HIBPF_10100 phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HIBPF_18100 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HIBPF_10450 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HIBPF_17190 fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:hif00040]
D HIBPF_14960 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HIBPF_17620 D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HIBPF_15960 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D HIBPF_15970 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D HIBPF_15990 L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hif00051]
D HIBPF_15660 pgmB; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HIBPF_15960 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D HIBPF_15970 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D HIBPF_15990 L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_10450 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HIBPF_17190 fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HIBPF_18830 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HIBPF_18100 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HIBPF_17060 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HIBPF_18840 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:hif00052]
D HIBPF_14900 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HIBPF_14890 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HIBPF_14880 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HIBPF_03010 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HIBPF_14960 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:hif00500]
D HIBPF_14960 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HIBPF_04750 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HIBPF_09810 glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hif00520]
D HIBPF_12880 beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HIBPF_04750 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HIBPF_20120 N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D HIBPF_19640 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HIBPF_19650 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HIBPF_19030 L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HIBPF_08150 predicted phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HIBPF_16380 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HIBPF_11860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HIBPF_02120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HIBPF_19680 predicted N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D HIBPF_19690 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HIBPF_19660 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HIBPF_06650 siaB; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D HIBPF_14960 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HIBPF_14890 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HIBPF_14880 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HIBPF_03010 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HIBPF_09810 glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HIBPF_15660 pgmB; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:hif00620]
D HIBPF_06090 pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HIBPF_06080 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_20040 pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HIBPF_10600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HIBPF_10610 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HIBPF_09780 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HIBPF_19290 acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HIBPF_12770 acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HIBPF_12760 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HIBPF_06440 acetyl-CoA carboxylase, beta (carboxyltranferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HIBPF_20590 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D HIBPF_00830 fermentative D-lactate dehydrogenase,NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D HIBPF_05920 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D HIBPF_02640 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HIBPF_06550 predicted hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HIBPF_05780 predicted Zn-dependent hydrolase-like protein,including glyoxylases K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HIBPF_06200 fused malic enzyme predicted oxidoreductase/predicted phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D HIBPF_10540 malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HIBPF_07650 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D HIBPF_14730 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HIBPF_14740 fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HIBPF_14750 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D HIBPF_14760 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D HIBPF_10360 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HIBPF_15010 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HIBPF_12620 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hif00630]
D HIBPF_10540 malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HIBPF_13770 catalase K03781 katE; catalase [EC:1.11.1.6]
D HIBPF_09000 putative 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HIBPF_17630 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_14230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_09920 formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:hif00640]
D HIBPF_10600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HIBPF_10610 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_20040 pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HIBPF_19290 acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HIBPF_12770 acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HIBPF_12760 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HIBPF_06440 acetyl-CoA carboxylase, beta (carboxyltranferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HIBPF_10680 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HIBPF_10670 succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HIBPF_06100 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:hif00650]
D HIBPF_14730 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HIBPF_14740 fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HIBPF_14750 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D HIBPF_14760 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D HIBPF_20040 pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HIBPF_09880 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HIBPF_09870 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:hif00660]
D HIBPF_09880 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HIBPF_09870 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HIBPF_10680 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HIBPF_10670 succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HIBPF_12600 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HIBPF_12590 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HIBPF_12610 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hif00562]
D HIBPF_13690 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HIBPF_17060 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hif00190]
D HIBPF_15620 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HIBPF_14730 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HIBPF_14740 fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HIBPF_14750 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D HIBPF_14760 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D HIBPF_11920 cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HIBPF_11930 probable cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HIBPF_18490 F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HIBPF_18510 F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HIBPF_18500 F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HIBPF_18480 F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HIBPF_18520 F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HIBPF_18450 F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HIBPF_18470 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HIBPF_18460 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HIBPF_19540 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:hif00680]
D HIBPF_20140 predicted esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D HIBPF_14230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HIBPF_09000 putative 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HIBPF_10360 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HIBPF_10540 malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HIBPF_18100 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HIBPF_10450 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HIBPF_17190 fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_10600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HIBPF_10610 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HIBPF_15540 phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HIBPF_18640 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HIBPF_11040 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HIBPF_12330 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hif00910]
D HIBPF_02940 periplasmic nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D HIBPF_02970 diheme cytochrome C NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D HIBPF_11970 nitrite reductase, formate-dependent, cytochrome K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HIBPF_20200 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_16160 predicted carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:hif00920]
D HIBPF_17690 DNA-binding transcriptional regulator CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HIBPF_17050 thiosulfate:cyanide sulfurtransferase (rhodanese) K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D HIBPF_16040 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HIBPF_11650 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HIBPF_06480 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HIBPF_00840 cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HIBPF_12160 dimethyl sulfoxide reductase, anaerobic, subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HIBPF_12170 oxidoreductase, Fe-S subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HIBPF_12180 oxidoreductase, membrane subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hif00061]
D HIBPF_19290 acetyl-CoA carboxylase, carboxytransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HIBPF_12770 acetyl CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HIBPF_12760 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HIBPF_06440 acetyl-CoA carboxylase, beta (carboxyltranferase) subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HIBPF_19780 acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D HIBPF_19800 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HIBPF_19810 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HIBPF_08800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HIBPF_19790 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HIBPF_08250 beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HIBPF_12040 (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HIBPF_04560 enoyl-[acyl-carrier-protein] reductase,NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HIBPF_19450 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_00020 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D HIBPF_19450 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_00020 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hif00561]
D HIBPF_15610 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HIBPF_02100 conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HIBPF_15750 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HIBPF_02850 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:hif00564]
D HIBPF_16050 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HIBPF_16990 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HIBPF_17000 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D HIBPF_17010 sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D HIBPF_15610 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HIBPF_02100 conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HIBPF_15750 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HIBPF_02850 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HIBPF_16360 lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D HIBPF_16960 glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HIBPF_13920 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HIBPF_19070 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HIBPF_19840 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HIBPF_04420 phosphatidylglycerophosphate synthetase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HIBPF_08450 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D HIBPF_20420 Phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hif01040]
D HIBPF_00770 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HIBPF_14810 predicted hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hif00230]
D HIBPF_19370 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HIBPF_10100 phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HIBPF_10561 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HIBPF_14240 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HIBPF_15570 phosphoribosylformyl-glycineamide synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HIBPF_10180 N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HIBPF_10170 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HIBPF_04640 phosphoribosylaminoimidazole-succinocarboxa mide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HIBPF_16410 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HIBPF_14250 bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HIBPF_06060 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HIBPF_20370 NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HIBPF_16810 Acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HIBPF_18160 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HIBPF_19970 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HIBPF_11210 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HIBPF_01600 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HIBPF_14360 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HIBPF_02030 orfM; predicted xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HIBPF_17100 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HIBPF_01610 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HIBPF_20640 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HIBPF_05820 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HIBPF_05810 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HIBPF_00740 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HIBPF_06970 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D HIBPF_20620 guanosine-3',5'-bis 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HIBPF_16910 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HIBPF_02840 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D HIBPF_16060 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D HIBPF_10330 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HIBPF_17420 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HIBPF_02990 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HIBPF_18690 predicted pyrophosphatase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HIBPF_19360 predicted phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D HIBPF_17760 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D HIBPF_17900 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HIBPF_17890 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HIBPF_17880 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HIBPF_16160 predicted carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hif00240]
D HIBPF_07680 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D HIBPF_02150 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HIBPF_06000 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HIBPF_12020 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HIBPF_14360 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HIBPF_18690 predicted pyrophosphatase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HIBPF_11910 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HIBPF_05950 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HIBPF_19560 uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HIBPF_20370 NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HIBPF_16810 Acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HIBPF_02230 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D HIBPF_06040 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HIBPF_18700 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HIBPF_17420 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D HIBPF_07070 cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HIBPF_00740 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HIBPF_19570 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D HIBPF_05820 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HIBPF_05810 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HIBPF_18730 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HIBPF_13480 deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HIBPF_18050 thymidine kinase/deoxyuridine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HIBPF_14080 thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HIBPF_07730 conserved hypothetical protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hif00250]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_17640 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HIBPF_02280 probable aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HIBPF_17950 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D HIBPF_04630 argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HIBPF_14990 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HIBPF_10330 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HIBPF_16410 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HIBPF_20200 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_19030 L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HIBPF_10561 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hif00260]
D HIBPF_01310 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HIBPF_16350 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HIBPF_01300 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HIBPF_01290 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HIBPF_14230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HIBPF_09000 putative 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D HIBPF_15540 phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HIBPF_18640 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HIBPF_11040 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HIBPF_12330 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HIBPF_07730 conserved hypothetical protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_19070 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HIBPF_02300 L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HIBPF_15680 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HIBPF_07750 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HIBPF_07740 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HIBPF_13530 GABA aminotransferase, PLP-dependent K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HIBPF_13560 L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:hif00270]
D HIBPF_16040 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HIBPF_11650 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HIBPF_04421 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HIBPF_05040 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HIBPF_10990 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HIBPF_10480 Nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HIBPF_19970 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HIBPF_04320 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_07341 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_18390 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HIBPF_01310 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HIBPF_16350 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HIBPF_06480 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HIBPF_00840 cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HIBPF_10710 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_10540 malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HIBPF_02300 L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HIBPF_18640 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HIBPF_11040 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hif00280]
D HIBPF_10710 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hif00290]
D HIBPF_15680 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HIBPF_12600 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HIBPF_12590 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HIBPF_12610 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HIBPF_09880 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HIBPF_09870 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HIBPF_17020 ketol-acid reductoisomerase, NAD(P)-binding K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HIBPF_15690 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HIBPF_10710 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HIBPF_02280 probable aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HIBPF_12620 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hif00300]
D HIBPF_01310 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HIBPF_16350 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HIBPF_01990 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HIBPF_08430 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HIBPF_10340 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HIBPF_01420 putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HIBPF_15590 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HIBPF_15820 diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HIBPF_11420 UDP-N-acetylmuramyl-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HIBPF_11410 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hif00310]
D HIBPF_05800 dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:hif00220]
D HIBPF_16150 ornithine carbamoyltransferase 1 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HIBPF_04630 argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HIBPF_14990 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HIBPF_17900 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HIBPF_17890 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HIBPF_17880 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_20200 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HIBPF_16160 predicted carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_02280 probable aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:hif00330]
D HIBPF_18330 probable oxidoreductase OrdL K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D HIBPF_02520 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HIBPF_14120 gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HIBPF_06140 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:hif00340]
D HIBPF_18610 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HIBPF_18540 histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D HIBPF_18560 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5 '-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HIBPF_18570 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HIBPF_18550 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HIBPF_18580 histidine biosynthesis bifunctional protein HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18600 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D HIBPF_17370 Histidine decarboxylase K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
C 00350 Tyrosine metabolism [PATH:hif00350]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:hif00360]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:hif00380]
D HIBPF_05800 dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_13770 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hif00400]
D HIBPF_08910 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HIBPF_20390 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HIBPF_12780 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D HIBPF_16240 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HIBPF_20380 shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HIBPF_09930 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HIBPF_20270 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HIBPF_07520 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HIBPF_07530 Glutamine amidotransferase class-I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HIBPF_07550 Glycosyl transferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HIBPF_07560 tryptophan biosynthesis protein trpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D HIBPF_07750 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HIBPF_07740 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HIBPF_06890 fused chorismate mutase T/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HIBPF_11300 fused chorismate mutase P/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:hif00430]
D HIBPF_10610 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HIBPF_10600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hif00450]
D HIBPF_00840 cystathionine gamma-synthase, PLP-dependent K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HIBPF_04421 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HIBPF_05040 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HIBPF_11160 thioredoxin reductase, FAD/NAD(P)-binding K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HIBPF_06570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hif00460]
D HIBPF_17640 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HIBPF_14230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hif00470]
D HIBPF_09800 alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D HIBPF_11350 D-alanine:D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HIBPF_20600 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HIBPF_11390 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HIBPF_15590 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HIBPF_15820 diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:hif00480]
D HIBPF_04610 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HIBPF_04590 predicted enzyme subunit K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D HIBPF_04600 predicted enzyme subunit K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D HIBPF_05000 Probable cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HIBPF_14370 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HIBPF_10150 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HIBPF_17090 aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HIBPF_01570 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HIBPF_19850 glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HIBPF_17740 gluconate-6-phosphate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HIBPF_17700 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HIBPF_17560 DNA-binding transcriptional regulator OxyR K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hif00540]
D HIBPF_12050 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HIBPF_11310 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HIBPF_13960 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HIBPF_15740 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HIBPF_12060 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HIBPF_00560 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HIBPF_05641 probable phosphosugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HIBPF_09010 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HIBPF_05640 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HIBPF_00550 kdsB; 3-deoxy-D-manno-octulosonic acid cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HIBPF_16270 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HIBPF_08740 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HIBPF_20300 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D HIBPF_02040 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HIBPF_10840 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HIBPF_08730 fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HIBPF_15870 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HIBPF_11590 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HIBPF_11620 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:hif00542]
D HIBPF_04700 wecA; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hif00541]
D HIBPF_14960 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HIBPF_03010 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HIBPF_14371 rmlB; TDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HIBPF_15660 pgmB; phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HIBPF_16380 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HIBPF_06650 siaB; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
C 00550 Peptidoglycan biosynthesis [PATH:hif00550]
D HIBPF_11860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HIBPF_02120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HIBPF_11360 UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HIBPF_11390 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HIBPF_11420 UDP-N-acetylmuramyl-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HIBPF_11350 D-alanine:D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HIBPF_11410 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HIBPF_13910 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HIBPF_11400 phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HIBPF_11370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HIBPF_14770 biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HIBPF_18920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HIBPF_04650 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HIBPF_00360 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HIBPF_11430 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HIBPF_00330 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HIBPF_08210 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hif00552]
D HIBPF_04700 wecA; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HIBPF_08840 licD; protein licD, phosphorylcholine transferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D HIBPF_09100 lic2D; licD protein, phosphorylcholine transferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hif00543]
D HIBPF_04700 wecA; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HIBPF_16040 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hif00730]
D HIBPF_19190 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HIBPF_03250 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HIBPF_07850 predicted thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HIBPF_07880 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HIBPF_19200 hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HIBPF_19180 Thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HIBPF_08460 thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HIBPF_04720 probable GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HIBPF_02990 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HIBPF_03060 TENA/THI-4 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:hif00740]
D HIBPF_20430 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HIBPF_13590 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HIBPF_15470 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D HIBPF_08480 riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HIBPF_10140 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HIBPF_12840 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HIBPF_18370 acid phosphatase/phosphotransferase, class B,non-specific K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2]
D HIBPF_19200 hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HIBPF_19370 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:hif00750]
D HIBPF_14420 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D HIBPF_11040 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HIBPF_01290 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HIBPF_05940 conserved hypothetical pyridoxine biosynthesis enzyme K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HIBPF_05930 predicted glutamine amidotransferase involved in pyridoxine biosynthesis K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hif00760]
D HIBPF_18160 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HIBPF_15480 bifunctional protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HIBPF_20370 NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D HIBPF_16810 Acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HIBPF_18690 predicted pyrophosphatase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HIBPF_19000 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D HIBPF_00700 probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D HIBPF_07200 pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D HIBPF_07210 pyridine nucleotide transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:hif00770]
D HIBPF_09880 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HIBPF_09870 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HIBPF_17020 ketol-acid reductoisomerase, NAD(P)-binding K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HIBPF_15690 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HIBPF_16480 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HIBPF_13490 phosphopantothenoylcysteine synthetase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HIBPF_18690 predicted pyrophosphatase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D HIBPF_16280 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HIBPF_14220 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HIBPF_19760 putative 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D HIBPF_10710 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:hif00780]
D HIBPF_08950 Biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D HIBPF_08800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HIBPF_19790 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HIBPF_12040 (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HIBPF_04560 enoyl-[acyl-carrier-protein] reductase,NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HIBPF_08960 conserved hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D HIBPF_08970 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HIBPF_08980 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HIBPF_08940 probable dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HIBPF_07940 predicted dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HIBPF_12360 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D HIBPF_01590 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hif00785]
D HIBPF_00310 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D HIBPF_00300 Lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_06090 pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D HIBPF_06080 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HIBPF_05790 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D HIBPF_05800 dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:hif00790]
D HIBPF_07960 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HIBPF_02600 dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D HIBPF_02090 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D HIBPF_00630 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D HIBPF_08160 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HIBPF_14130 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HIBPF_06450 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HIBPF_20430 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HIBPF_11000 Glutamine amidotransferase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D HIBPF_11010 conserved hypothetical protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D HIBPF_11020 conserved hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D HIBPF_10760 predicted 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HIBPF_10770 Predicted methyltransferase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HIBPF_10750 predicted PP-loop superfamily ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HIBPF_06900 conserved protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HIBPF_05670 molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HIBPF_05680 molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HIBPF_05700 molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HIBPF_02860 molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HIBPF_07970 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HIBPF_14640 molybdopterin-guanine dinucleotide synthase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hif00670]
D HIBPF_14130 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HIBPF_16010 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HIBPF_14230 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HIBPF_14250 bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HIBPF_16560 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HIBPF_14080 thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HIBPF_09920 formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D HIBPF_07930 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HIBPF_14500 predicted 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hif00860]
D HIBPF_02180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HIBPF_11140 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D HIBPF_16070 HemX, predicted uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D HIBPF_14540 putative heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hif00130]
D HIBPF_02270 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D HIBPF_02260 menaquinone biosynthesis protein MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D HIBPF_02250 conserved hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D HIBPF_12790 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D HIBPF_20250 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D HIBPF_12800 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D HIBPF_11130 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D HIBPF_18230 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D HIBPF_08880 putative NAD(P)H oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hif00900]
D HIBPF_07880 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HIBPF_15030 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HIBPF_17140 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D HIBPF_10090 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HIBPF_17150 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D HIBPF_03150 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HIBPF_12430 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D HIBPF_07870 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HIBPF_14310 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HIBPF_13910 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HIBPF_12350 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D HIBPF_14371 rmlB; TDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D HIBPF_02270 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D HIBPF_14371 rmlB; TDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:hif00332]
D HIBPF_14120 gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HIBPF_06140 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hif00261]
D HIBPF_01310 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D HIBPF_16350 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HIBPF_01990 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HIBPF_08430 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hif00521]
D HIBPF_13690 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HIBPF_14371 rmlB; TDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D HIBPF_14371 rmlB; TDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hif00401]
D HIBPF_06890 fused chorismate mutase T/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HIBPF_07520 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HIBPF_07530 Glutamine amidotransferase class-I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HIBPF_19800 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HIBPF_19790 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HIBPF_04560 enoyl-[acyl-carrier-protein] reductase,NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HIBPF_19780 acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hif00999]
D HIBPF_10990 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HIBPF_16240 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D HIBPF_17900 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D HIBPF_17890 ureB; Urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D HIBPF_17880 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hif03020]
D HIBPF_18190 RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HIBPF_18200 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HIBPF_15080 RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HIBPF_20630 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hif03010]
D HIBPF_05960 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HIBPF_14000 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HIBPF_15320 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HIBPF_15090 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HIBPF_15160 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HIBPF_17820 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HIBPF_17470 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HIBPF_15190 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HIBPF_07910 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HIBPF_15390 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HIBPF_15100 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HIBPF_17460 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HIBPF_15110 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HIBPF_15200 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HIBPF_08220 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HIBPF_20350 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HIBPF_15290 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HIBPF_17840 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HIBPF_15340 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HIBPF_12820 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HIBPF_17980 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HIBPF_18180 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HIBPF_15350 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HIBPF_15380 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HIBPF_15370 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HIBPF_15210 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HIBPF_15180 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HIBPF_16390 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HIBPF_17850 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HIBPF_16400 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HIBPF_18170 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HIBPF_07920 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HIBPF_15230 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HIBPF_15140 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HIBPF_15310 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HIBPF_15070 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HIBPF_15170 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HIBPF_20320 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HIBPF_08300 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HIBPF_14320 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HIBPF_15330 rplB; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HIBPF_15360 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HIBPF_15220 rplN; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HIBPF_10310 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D HIBPF_14330 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HIBPF_13510 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HIBPF_15300 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HIBPF_15150 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HIBPF_15530 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HIBPF_19820 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HIBPF_13520 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HIBPF_12510 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HIBPF_08310 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HIBPF_15120 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hif00970]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-7 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Trp-2 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
D HIBPF_02180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HIBPF_07140 glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HIBPF_14940 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HIBPF_02610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HIBPF_08490 asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HIBPF_13780 glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HIBPF_13810 glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HIBPF_07250 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HIBPF_01560 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HIBPF_00780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HIBPF_06570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HIBPF_16560 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HIBPF_07580 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HIBPF_13900 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HIBPF_12850 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HIBPF_10530 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HIBPF_09860 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HIBPF_15780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HIBPF_03160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_17310 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_08400 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HIBPF_08390 phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HIBPF_10110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HIBPF_16430 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hif03060]
D HIBPF_15130 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D HIBPF_16670 preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D HIBPF_18870 protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D HIBPF_01820 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HIBPF_01810 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HIBPF_01830 conserved hypothetical preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HIBPF_12480 Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HIBPF_14040 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HIBPF_15650 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HIBPF_01500 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HIBPF_15440 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HIBPF_20170 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D HIBPF_20180 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HIBPF_20190 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D HIBPF_00150 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HIBPF_12440 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hif04122]
D HIBPF_03250 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HIBPF_16600 Response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HIBPF_01840 predicted redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HIBPF_17500 Conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HIBPF_17510 predicted intraceullular sulfur oxidation protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HIBPF_17520 predicted intraceullular sulfur oxidation protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HIBPF_07300 predicted sulfite reductase subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HIBPF_19960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HIBPF_05700 molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D HIBPF_05670 molybdopterin biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HIBPF_05690 molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D HIBPF_07980 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HIBPF_05680 molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HIBPF_02860 molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HIBPF_07850 predicted thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hif03018]
D HIBPF_14110 nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HIBPF_19220 ribonuclease E, RNA-binding protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HIBPF_14200 ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HIBPF_01730 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HIBPF_14470 exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HIBPF_01750 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HIBPF_15790 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HIBPF_02400 transcription termination factor rho K03628 rho; transcription termination factor Rho
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_06120 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D HIBPF_17860 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HIBPF_19240 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HIBPF_00620 probable poly polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hif03030]
D HIBPF_19610 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HIBPF_15670 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HIBPF_06050 DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HIBPF_18750 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HIBPF_13880 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HIBPF_00110 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HIBPF_07640 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HIBPF_12550 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HIBPF_09790 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HIBPF_17970 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_19620 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HIBPF_12070 ribonuclease HII, degrades RNA of DNA-RNA hybrids K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hif03410]
D HIBPF_05530 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HIBPF_00220 uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HIBPF_15520 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HIBPF_13570 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HIBPF_16250 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HIBPF_00450 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_10500 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hif03420]
D HIBPF_06420 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HIBPF_01930 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D HIBPF_06220 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HIBPF_00540 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HIBPF_10780 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hif03430]
D HIBPF_16760 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HIBPF_00660 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HIBPF_19320 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D HIBPF_10780 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HIBPF_07380 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HIBPF_19380 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HIBPF_07860 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HIBPF_10500 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_15670 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HIBPF_12550 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HIBPF_06050 DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HIBPF_13880 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HIBPF_18750 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HIBPF_19610 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HIBPF_07640 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HIBPF_00110 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HIBPF_20400 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_18010 putative adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:hif03440]
D HIBPF_10500 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_12560 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HIBPF_02720 DNA repair protein Rec0 K03584 recO; DNA repair protein RecO (recombination protein O)
D HIBPF_18890 recombination protein RecR K06187 recR; recombination protein RecR
D HIBPF_16110 recA; RecA K03553 recA; recombination protein RecA
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_02570 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HIBPF_02560 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HIBPF_02580 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HIBPF_20610 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HIBPF_01470 predicted transcriptional regulator containing an HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HIBPF_08281 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HIBPF_13610 exonuclease V (RecBCD complex), gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HIBPF_08280 exonuclease V (RecBCD complex), alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HIBPF_15670 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HIBPF_12550 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HIBPF_06050 DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HIBPF_13880 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HIBPF_18750 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HIBPF_19610 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HIBPF_07640 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HIBPF_00110 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HIBPF_02890 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HIBPF_17830 primosomal replication protein N K02686 priB; primosomal replication protein N
D HIBPF_02670 predicted primosomal replication protein N K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hif02010]
D HIBPF_03050 putative ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D HIBPF_03040 putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D HIBPF_03030 putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D HIBPF_05330 molybdate transporter subunit K02020 modA; molybdate transport system substrate-binding protein
D HIBPF_08720 Bacterial extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HIBPF_05340 molybdate transporter subunit K02018 modB; molybdate transport system permease protein
D HIBPF_08710 Binding-protein-dependent transport system, inner membrane component K02018 modB; molybdate transport system permease protein
D HIBPF_05350 molybdate transporter subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HIBPF_08700 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HIBPF_01380 hitA; iron-utilization periplasmic protein hFbpA K02012 afuA; iron(III) transport system substrate-binding protein
D HIBPF_01390 hitB; iron(III)-transport system permease protein hFbpB K02011 afuB; iron(III) transport system permease protein
D HIBPF_01400 hitC; iron-utilization ATP-binding protein hFbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HIBPF_12390 thiamine ABC transporter periplasmic-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D HIBPF_12380 thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D HIBPF_12370 thiamin transporter subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D HIBPF_07000 Bacterial extracellular solute-binding protein,family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HIBPF_18340 spermidine/putrescine-binding periplasmic protein 2 precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HIBPF_07010 polyamine transporter subunit K11070 potC; spermidine/putrescine transport system permease protein
D HIBPF_07020 polyamine transporter subunit K11071 potB; spermidine/putrescine transport system permease protein
D HIBPF_07030 polyamine transporter subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HIBPF_11830 conserved ABC-type transport system protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HIBPF_11820 conserved ABC-type transport system protein,periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HIBPF_11810 conserved ABC-type transport system protein,permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HIBPF_11840 predicted NTP binding protein, contains STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D HIBPF_11800 conserved ABC-type transport system protein,ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HIBPF_18280 D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D HIBPF_18290 D-ribose transporter subunit K10440 rbsC; ribose transport system permease protein
D HIBPF_18300 fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HIBPF_18310 Ribose transport permease protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HIBPF_14860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HIBPF_14840 Beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D HIBPF_14850 Galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D HIBPF_07440 phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D HIBPF_07430 phosphate transporter subunit K02037 pstC; phosphate transport system permease protein
D HIBPF_07420 phosphate transporter subunit K02038 pstA; phosphate transport system permease protein
D HIBPF_07410 phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HIBPF_10860 arginine-binding periplasmic protein K09997 artI; arginine transport system substrate-binding protein
D HIBPF_10880 arginine transporter subunit K09998 artM; arginine transport system permease protein
D HIBPF_10870 arginine transporter subunit K09999 artQ; arginine transport system permease protein
D HIBPF_10850 arginine transporter subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D HIBPF_11870 Bacterial extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HIBPF_11880 probable amino-acid ABC transporter permease protein K10009 tcyB; L-cystine transport system permease protein
D HIBPF_11890 probable amino-acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HIBPF_15900 DL-methionine transporter subunit K02073 metQ; D-methionine transport system substrate-binding protein
D HIBPF_15890 DL-methionine transporter subunit K02072 metI; D-methionine transport system permease protein
D HIBPF_15880 DL-methionine transporter subunit K02071 metN; D-methionine transport system ATP-binding protein
D HIBPF_11490 oligopeptide transporter subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D HIBPF_11500 oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D HIBPF_11510 oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D HIBPF_11520 oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D HIBPF_11530 oligopeptide transporter subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D HIBPF_14550 hbpA; heme-binding lipoprotein K12368 dppA; dipeptide transport system substrate-binding protein
D HIBPF_10790 dipeptide transporter K12369 dppB; dipeptide transport system permease protein
D HIBPF_10800 dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D HIBPF_10810 dipeptide transporter K12371 dppD; dipeptide transport system ATP-binding protein
D HIBPF_10820 dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D HIBPF_10380 predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D HIBPF_10390 predicted antimicrobial peptide transporter subunit K19227 sapB; cationic peptide transport system permease protein
D HIBPF_10400 predicted antimicrobial peptide transporter subunit K19228 sapC; cationic peptide transport system permease protein
D HIBPF_10410 predicted antimicrobial peptide transporter subunit K19229 sapD; cationic peptide transport system ATP-binding protein
D HIBPF_10420 predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D HIBPF_04460 High-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D HIBPF_19280 high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D HIBPF_19270 zinc transporter subunit: ATP-binding component of ABC superfamily K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HIBPF_03100 hfeA; putative periplasmic chelated iron binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D HIBPF_03080 hfeC; putative ABC-type chelated iron transport system,permease component K11605 sitC; manganese/iron transport system permease protein
D HIBPF_03070 hfeD; putative ABC-type chelated iron transport system,permease component K11606 sitD; manganese/iron transport system permease protein
D HIBPF_03090 hfeB; putative ABC-type chelated iron transport system,ATPase component K11607 sitB; manganese/iron transport system ATP-binding protein
D HIBPF_10220 Cobalamin (vitamin B12) biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HIBPF_10210 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D HIBPF_10200 Uncharacterized ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HIBPF_10240 putative ABC-type Co2+ transport system,periplasmic component K10094 cbiK; nickel transport protein
D HIBPF_10230 conserved hypothetical protein K16915 cbiL; nickel transport protein
D HIBPF_08920 outer membrane-specific lipoprotein transporter subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HIBPF_08990 outer membrane-specific lipoprotein transporter subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HIBPF_08930 outer membrane-specific lipoprotein transporter subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HIBPF_11760 heme exporter protein C K02195 ccmC; heme exporter protein C
D HIBPF_11770 heme exporter protein B K02194 ccmB; heme exporter protein B
D HIBPF_11780 heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HIBPF_05010 conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D HIBPF_05030 conserved inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D HIBPF_11270 predicted transporter subunit: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HIBPF_15420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HIBPF_15430 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HIBPF_00570 msbA; lipid A export ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HIBPF_12120 conserved hypothetical ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HIBPF_11180 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HIBPF_11170 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HIBPF_00400 conserved hypothetical ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HIBPF_08630 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:hif02060]
D HIBPF_04740 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HIBPF_04730 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HIBPF_04750 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HIBPF_18820 PTS system, fructose-specific IIA/FPr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D HIBPF_18840 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HIBPF_18830 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HIBPF_11280 sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hif03070]
D HIBPF_01820 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HIBPF_01810 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HIBPF_16670 preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D HIBPF_18870 protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D HIBPF_15130 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D HIBPF_01830 conserved hypothetical preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HIBPF_12480 Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HIBPF_14040 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HIBPF_15440 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HIBPF_15650 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HIBPF_01500 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HIBPF_20170 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D HIBPF_20180 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HIBPF_20190 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hif02020]
D HIBPF_07390 sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HIBPF_07400 DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HIBPF_07440 phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D HIBPF_14700 transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HIBPF_04800 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HIBPF_04790 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HIBPF_20560 Sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HIBPF_14280 DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HIBPF_12540 chromosomal replication initiator protein DnaA,DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D HIBPF_00290 [citrate [pro-3S]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D HIBPF_00280 citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D HIBPF_00270 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D HIBPF_00260 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D HIBPF_00250 CitXG K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D HIBPF_19770 anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HIBPF_15630 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HIBPF_02110 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D HIBPF_15821 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D HIBPF_14730 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HIBPF_14740 fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HIBPF_14750 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D HIBPF_14760 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D HIBPF_14950 Carbon storage regulator K03563 csrA; carbon storage regulator
D HIBPF_10153 haf2C; hafC fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_02770 aef2C; putative F17-like fimbrial usher K07347 fimD; outer membrane usher protein
D HIBPF_00190 aef1C; Fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_11222 hafC; hafC usher protein K07347 fimD; outer membrane usher protein
D HIBPF_05420 aef3C; Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HIBPF_04690 uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D HIBPF_02870 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_13450 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HIBPF_11920 cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HIBPF_11930 probable cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hif02024]
D HIBPF_18390 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HIBPF_19240 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HIBPF_07520 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HIBPF_07530 Glutamine amidotransferase class-I K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HIBPF_08910 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HIBPF_04800 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HIBPF_04790 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HIBPF_19450 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_00020 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_13450 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HIBPF_20430 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D HIBPF_13590 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HIBPF_11490 oligopeptide transporter subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D HIBPF_11500 oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D HIBPF_11510 oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D HIBPF_11520 oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D HIBPF_11530 oligopeptide transporter subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D HIBPF_20440 putative ABC-type oligopeptide transport system,periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HIBPF_12480 Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HIBPF_16670 preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D HIBPF_18870 protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D HIBPF_15130 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D HIBPF_01830 conserved hypothetical preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HIBPF_14040 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HIBPF_15440 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HIBPF_15650 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HIBPF_01500 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hif02030]
D HIBPF_18280 D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D HIBPF_14860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HIBPF_14550 hbpA; heme-binding lipoprotein K12368 dppA; dipeptide transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:hif02040]
D HIBPF_11870 Bacterial extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HIBPF_17960 RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hif01501]
D HIBPF_03000 putative integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HIBPF_12880 beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HIBPF_11490 oligopeptide transporter subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D HIBPF_11500 oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D HIBPF_11510 oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D HIBPF_11520 oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D HIBPF_11530 oligopeptide transporter subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D HIBPF_14190 transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D HIBPF_14180 predicted membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D HIBPF_14170 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D HIBPF_18920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HIBPF_00360 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HIBPF_11430 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hif01502]
D HIBPF_11350 D-alanine:D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HIBPF_09800 alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D HIBPF_11410 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HIBPF_11400 phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HIBPF_11370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hif01503]
D HIBPF_10380 predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D HIBPF_10390 predicted antimicrobial peptide transporter subunit K19227 sapB; cationic peptide transport system permease protein
D HIBPF_10400 predicted antimicrobial peptide transporter subunit K19228 sapC; cationic peptide transport system permease protein
D HIBPF_10410 predicted antimicrobial peptide transporter subunit K19229 sapD; cationic peptide transport system ATP-binding protein
D HIBPF_10420 predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D HIBPF_14700 transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HIBPF_00650 probable N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HIBPF_10490 conserved hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HIBPF_14620 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HIBPF_14180 predicted membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D HIBPF_14170 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D HIBPF_12050 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hif01000]
C 01001 Protein kinases [BR:hif01001]
D HIBPF_17220 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HIBPF_07390 sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HIBPF_04800 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HIBPF_20560 Sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HIBPF_02110 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hif01009]
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HIBPF_12330 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hif01002]
D HIBPF_12440 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HIBPF_02410 pilD; putative type 4 prepilin-like protein specific leader peptidase K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D HIBPF_01610 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HIBPF_05890 predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HIBPF_08370 predicted lipoprotein K13695 nlpC; probable lipoprotein NlpC
D HIBPF_10561 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HIBPF_19030 L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HIBPF_05750 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D HIBPF_10150 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HIBPF_20460 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D HIBPF_04020 putative uncharacterized protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D HIBPF_05000 Probable cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D HIBPF_14370 aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D HIBPF_01420 putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HIBPF_07050 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HIBPF_17090 aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D HIBPF_19260 predicted peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HIBPF_04680 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HIBPF_14920 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HIBPF_08565 putative uncharacterised protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HIBPF_08170 protease, ATP-dependent zinc-metallo K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HIBPF_16610 HtpX; Heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HIBPF_13930 predicted membrane bound zinc metalloprotease with PDZ domain K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HIBPF_20280 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D HIBPF_06430 probable periplasmic serine protease do/HhoA-like precursor K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D HIBPF_13580 serine endoprotease, periplasmic K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D HIBPF_12570 Iga1 protease type 2 K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D HIBPF_00330 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HIBPF_03110 penicillin-binding protein 7 homolog precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D HIBPF_08210 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HIBPF_16690 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HIBPF_18670 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HIBPF_08260 conserved hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D HIBPF_15600 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HIBPF_00150 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HIBPF_05740 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HIBPF_08850 protease IV (signal peptide peptidase) K04773 sppA; protease IV [EC:3.4.21.-]
D HIBPF_05610 predicted inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-]
D HIBPF_17280 (alpha)-aspartyl dipeptidase K05995 pepE; dipeptidase E [EC:3.4.13.21]
D HIBPF_15920 GlpG peptidase K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D HIBPF_18360 ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HIBPF_19160 Peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HIBPF_11240 predicted peptidase protein PmbA homologue K03592 pmbA; PmbA protein
D HIBPF_05880 predicted peptidase K03568 tldD; TldD protein
D HIBPF_19740 HflC K04087 hflC; modulator of FtsH protease HflC
D HIBPF_19750 HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hif01003]
D HIBPF_05070 lsgB; CMP-N-acetylneuraminate-beta-galactosamide-alph a-2,3-sialyltransferase K00785 lst; N-acetyllactosaminide alpha-2,3-sialyltransferase [EC:2.4.3.6]
D HIBPF_14770 biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HIBPF_04650 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HIBPF_18920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HIBPF_04700 wecA; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hif01005]
D HIBPF_12050 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D HIBPF_12060 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D HIBPF_11310 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D HIBPF_13960 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D HIBPF_15740 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D HIBPF_00560 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D HIBPF_08740 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D HIBPF_20300 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D HIBPF_16270 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D HIBPF_02040 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D HIBPF_09010 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D HIBPF_00550 kdsB; 3-deoxy-D-manno-octulosonic acid cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D HIBPF_05640 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D HIBPF_05641 probable phosphosugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D HIBPF_16260 lgtF; Glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D HIBPF_11620 rfaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D HIBPF_02050 opsX; ADP-heptose--lipooligosaccharide heptosyltransferase I K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D HIBPF_10840 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HIBPF_15870 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D HIBPF_08730 fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D HIBPF_11590 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D HIBPF_04700 wecA; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hif01011]
D HIBPF_11860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HIBPF_02120 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HIBPF_11360 UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HIBPF_11390 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HIBPF_11420 UDP-N-acetylmuramyl-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HIBPF_11350 D-alanine:D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HIBPF_09800 alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D HIBPF_20600 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HIBPF_11400 phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HIBPF_11370 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HIBPF_12830 putative virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HIBPF_18920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HIBPF_04650 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D HIBPF_00360 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HIBPF_11430 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HIBPF_00330 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HIBPF_08210 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D HIBPF_03110 penicillin-binding protein 7 homolog precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D HIBPF_14770 biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D HIBPF_05750 conserved hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D HIBPF_20280 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D HIBPF_05890 predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D HIBPF_19260 predicted peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D HIBPF_04020 putative uncharacterized protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D HIBPF_14790 putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HIBPF_04480 membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D HIBPF_15500 membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D HIBPF_01760 Membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D HIBPF_18720 predicted periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HIBPF_00340 RlpA-like protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HIBPF_00650 probable N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hif01004]
D HIBPF_19800 malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HIBPF_19810 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HIBPF_08800 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D HIBPF_19790 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HIBPF_08250 beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D HIBPF_12040 (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HIBPF_04560 enoyl-[acyl-carrier-protein] reductase,NADH-dependent K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D HIBPF_00770 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D HIBPF_14810 predicted hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D HIBPF_19450 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_00020 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_15610 glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D HIBPF_02100 conserved inner membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HIBPF_15750 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:hif01006]
D HIBPF_07870 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D HIBPF_14310 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HIBPF_13910 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HIBPF_00670 tRNA delta-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HIBPF_18230 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:hif01007]
D HIBPF_02180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HIBPF_07140 glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HIBPF_10110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HIBPF_16430 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HIBPF_00780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HIBPF_09860 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HIBPF_06570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HIBPF_12850 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HIBPF_07580 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HIBPF_13900 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HIBPF_10530 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HIBPF_02610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HIBPF_08490 asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HIBPF_03160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_17310 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_13780 glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HIBPF_13810 glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HIBPF_01560 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HIBPF_15780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HIBPF_07250 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HIBPF_14940 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HIBPF_08400 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HIBPF_08390 phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HIBPF_10190 aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D HIBPF_02280 probable aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HIBPF_11050 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_18590 histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HIBPF_08970 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D HIBPF_13530 GABA aminotransferase, PLP-dependent K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D HIBPF_08980 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HIBPF_10710 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HIBPF_11040 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hif00194]
D HIBPF_18520 F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HIBPF_18510 F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HIBPF_18500 F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HIBPF_18490 F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HIBPF_18480 F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HIBPF_18470 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HIBPF_18460 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HIBPF_18450 F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HIBPF_18440 predicted F0F1-type ATP synthase, subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hif03000]
D HIBPF_04320 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_07341 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_12110 conserved hypothetical transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D HIBPF_10700 DNA-binding transcriptional dual regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D HIBPF_17030 DNA-binding transcriptional dual regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D HIBPF_04500 DNA-binding transcriptional activator,homocysteine-binding K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D HIBPF_17570 DNA-binding transcriptional dual regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D HIBPF_10640 DNA-binding transcriptional regulator, CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D HIBPF_15910 DNA-binding transcriptional repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D HIBPF_15950 DNA-binding transcriptional activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D HIBPF_14870 HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HIBPF_18260 Periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HIBPF_10350 DNA-binding transcriptional repressor,hypoxanthine-binding K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D HIBPF_19060 DNA-binding transcriptional dual regulator of fatty acid metabolism K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D HIBPF_14190 transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D HIBPF_13470 HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HIBPF_17580 DNA-binding transcriptional repressor K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D HIBPF_17650 DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D HIBPF_01630 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HIBPF_09970 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HIBPF_02380 probable heavy metal dependent transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D HIBPF_20210 Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HIBPF_13450 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HIBPF_07690 DNA-binding transcriptional dual regulator,global regulator of anaerobic growth K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D HIBPF_03260 predicted transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D HIBPF_01590 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HIBPF_12690 DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HIBPF_14780 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D HIBPF_15480 bifunctional protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HIBPF_05320 DNA-binding transcriptional dual regulator K02019 modE; molybdate transport system regulatory protein
D HIBPF_02390 Met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D HIBPF_19870 protein bolA homolog K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D HIBPF_10550 DNA-binding transcriptional dual regulator,L-arginine-binding K03402 argR; transcriptional regulator of arginine metabolism
D HIBPF_03060 TENA/THI-4 protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HIBPF_19250 Transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D HIBPF_18700 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HIBPF_06743 putative prophage regulatory protein K07733 alpA; prophage regulatory protein
D HIBPF_02490 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D HIBPF_00610 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D HIBPF_13600 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D HIBPF_11460 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hif03021]
D HIBPF_15080 RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HIBPF_18190 RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HIBPF_18200 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HIBPF_20630 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HIBPF_17960 RNA polymerase, sigma 70 (sigma D) factor K03086 rpoD; RNA polymerase primary sigma factor
D HIBPF_16510 RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HIBPF_08060 probable RNA polymerase sigma factor 24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HIBPF_02130 RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D HIBPF_15940 RNA polymerase-associated helicase protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D HIBPF_06800 Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HIBPF_08470 transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D HIBPF_16660 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HIBPF_07900 stringent starvation protein A K03599 sspA; stringent starvation protein A
D HIBPF_07890 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D HIBPF_16500 rseA; sigma-E factor regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D HIBPF_16490 rseB; sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D HIBPF_14580 predicted positive regulator of sigma E K03803 rseC; sigma-E factor negative regulatory protein RseC
D HIBPF_00610 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D HIBPF_08200 transcription elongation factor K03624 greA; transcription elongation factor GreA
D HIBPF_17590 transcription elongation factor K04760 greB; transcription elongation factor GreB
D HIBPF_02400 transcription termination factor rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hif03019]
D HIBPF_19220 ribonuclease E, RNA-binding protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HIBPF_07100 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HIBPF_00140 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HIBPF_14470 exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HIBPF_04710 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HIBPF_14200 ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D HIBPF_01750 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HIBPF_15790 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HIBPF_01730 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HIBPF_02400 transcription termination factor rho K03628 rho; transcription termination factor Rho
D HIBPF_12670 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HIBPF_06120 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D HIBPF_17860 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HIBPF_19240 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HIBPF_00620 probable poly polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D HIBPF_14110 nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D HIBPF_14950 Carbon storage regulator K03563 csrA; carbon storage regulator
D HIBPF_18240 ribonuclease E (RNase E) inhibitor protein K02553 rraA; regulator of ribonuclease activity A
D HIBPF_16830 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D HIBPF_11290 predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:hif03011]
D HIBPF_05960 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HIBPF_14000 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HIBPF_15320 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HIBPF_15090 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HIBPF_15160 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HIBPF_17820 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HIBPF_17470 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HIBPF_15190 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HIBPF_07910 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HIBPF_15390 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HIBPF_15100 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HIBPF_17460 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HIBPF_15110 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HIBPF_15200 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HIBPF_08220 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HIBPF_20350 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HIBPF_15290 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HIBPF_17840 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HIBPF_15340 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HIBPF_12820 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HIBPF_17980 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HIBPF_18180 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HIBPF_15350 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HIBPF_15380 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HIBPF_15370 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HIBPF_15210 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HIBPF_15180 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HIBPF_17850 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HIBPF_16400 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HIBPF_18170 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HIBPF_16390 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HIBPF_07920 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HIBPF_15230 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HIBPF_15140 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HIBPF_15310 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HIBPF_15070 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HIBPF_15170 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HIBPF_20320 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HIBPF_08300 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HIBPF_14320 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HIBPF_15330 rplB; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HIBPF_15360 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HIBPF_15220 rplN; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HIBPF_14330 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HIBPF_13510 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HIBPF_15300 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HIBPF_15150 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HIBPF_15530 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HIBPF_19820 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HIBPF_13520 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HIBPF_12510 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HIBPF_08310 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HIBPF_15120 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D HIBPF_10310 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:hif03009]
D HIBPF_00140 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HIBPF_04710 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D HIBPF_00130 GTP-binding protein era homolog K03595 era; GTPase
D HIBPF_14350 GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-]
D HIBPF_00610 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D HIBPF_06800 Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HIBPF_08470 transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D HIBPF_16660 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HIBPF_06180 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HIBPF_17780 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HIBPF_16550 16S rRNA m5C967 methyltransferase,S-adenosyl-L-methionine-dependent K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HIBPF_00120 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HIBPF_15450 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HIBPF_02480 conserved hypothetical RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HIBPF_18430 methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HIBPF_11450 S-adenosyl-dependent methyltransferase activity on membrane-located substrates K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HIBPF_05870 predicted methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HIBPF_14590 predicted SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D HIBPF_14480 23S rRNA (Gm2251)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HIBPF_08180 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D HIBPF_00370 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HIBPF_18910 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D HIBPF_04490 predicted methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D HIBPF_10690 predicted methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D HIBPF_03120 predicted Fe-S-cluster redox enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HIBPF_02830 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HIBPF_00460 conserved hypothetical pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HIBPF_15930 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HIBPF_10650 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HIBPF_19230 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D HIBPF_19980 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HIBPF_19080 predicted methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D HIBPF_00100 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HIBPF_08780 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D HIBPF_20340 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D HIBPF_06510 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D HIBPF_12710 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HIBPF_10630 conserved hypothetical adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D HIBPF_19390 Conserved hypothetical cupin superfamily metalloenzyme K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D HIBPF_19220 ribonuclease E, RNA-binding protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D HIBPF_07100 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D HIBPF_02500 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HIBPF_01750 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HIBPF_19120 ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D HIBPF_04720 probable GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HIBPF_19600 predicted GTP-binding protein K03977 engA; GTPase
D HIBPF_16230 predicted ribosome maturation factor SUA5/yciO/yrdC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HIBPF_20620 guanosine-3',5'-bis 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HIBPF_06870 rbfA; 30s ribosome binding factor K02834 rbfA; ribosome-binding factor A
D HIBPF_06790 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HIBPF_00380 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D HIBPF_00040 conserved protein K07042 ybeY; probable rRNA maturation factor
D HIBPF_08190 predicted RNA-binding protein K07574 yhbY; RNA-binding protein
D HIBPF_11250 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D HIBPF_02010 putative uncharacterised protein K05809 raiA; ribosome-associated inhibitor A
D HIBPF_19420 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D HIBPF_19830 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hif03016]
D HIBPF_18080 probable ribonuclease I K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D HIBPF_10070 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HIBPF_02180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HIBPF_15780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HIBPF_12850 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HIBPF_13900 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HIBPF_06570 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HIBPF_07140 glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HIBPF_09860 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HIBPF_10530 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HIBPF_02610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HIBPF_14940 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HIBPF_08490 asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HIBPF_07250 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HIBPF_01560 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HIBPF_00780 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HIBPF_07580 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HIBPF_03160 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_17310 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HIBPF_08400 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HIBPF_08390 phenylalanine tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HIBPF_10110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HIBPF_16430 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HIBPF_17160 D-tyr-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HIBPF_12860 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HIBPF_02900 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HIBPF_18220 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D HIBPF_10440 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HIBPF_06880 tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HIBPF_16820 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D HIBPF_03250 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HIBPF_16230 predicted ribosome maturation factor SUA5/yciO/yrdC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HIBPF_00670 tRNA delta-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HIBPF_12470 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HIBPF_17450 glucose-inhibited cell-division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HIBPF_17690 DNA-binding transcriptional regulator CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D HIBPF_12500 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HIBPF_02650 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D HIBPF_02160 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HIBPF_04570 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D HIBPF_19440 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D HIBPF_06370 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D HIBPF_13780 glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HIBPF_13810 glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HIBPF_07800 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HIBPF_14070 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HIBPF_16450 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D HIBPF_12700 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HIBPF_02131 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D HIBPF_00230 isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D HIBPF_02630 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D HIBPF_07080 putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D HIBPF_14600 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D HIBPF_20330 tRNA (guanine-1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HIBPF_19080 predicted methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D HIBPF_03270 hypothetical tRNA/rRNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D HIBPF_15460 tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HIBPF_19100 predicted O-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D HIBPF_07830 tRNA pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D HIBPF_00460 conserved hypothetical pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HIBPF_15930 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D HIBPF_19960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HIBPF_16600 Response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HIBPF_01840 predicted redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D HIBPF_17500 Conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D HIBPF_17510 predicted intraceullular sulfur oxidation protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D HIBPF_17520 predicted intraceullular sulfur oxidation protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D HIBPF_07300 predicted sulfite reductase subunit K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D HIBPF_03230 conserved hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D HIBPF_18630 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D HIBPF_08810 protein of unknown function, FAD dependent oxidoreductase domain K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D HIBPF_01890 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HIBPF_10750 predicted PP-loop superfamily ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HIBPF_10760 predicted 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HIBPF_10770 Predicted methyltransferase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HIBPF_06900 conserved protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HIBPF_14300 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D HIBPF_01880 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HIBPF_07850 predicted thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HIBPF_19310 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HIBPF_06390 Predicted P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D HIBPF_19470 predicted peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HIBPF_17990 predicted peptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HIBPF_00640 conserved hypothetical protein, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HIBPF_04470 conserved protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HIBPF_14470 exoribonuclease R, RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HIBPF_01730 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HIBPF_07110 putative uncharacterised protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:hif03012]
D HIBPF_06010 predicted translation initiation factor 1-like proterin K03113 EIF1; translation initiation factor 1
D HIBPF_06810 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HIBPF_08320 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HIBPF_16210 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HIBPF_13980 protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D HIBPF_16470 Translation elongation factor K02358 tuf; elongation factor Tu
D HIBPF_17490 Elongation factor Tu K02358 tuf; elongation factor Tu
D HIBPF_17480 protein chain elongation factor EF-G,GTP-binding K02355 fusA; elongation factor G
D HIBPF_09050 peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D HIBPF_15020 ribosome recycling factor K02838 frr; ribosome recycling factor
D HIBPF_09030 N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HIBPF_19410 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HIBPF_17810 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HIBPF_02680 elongation factor P K02356 efp; elongation factor P
D HIBPF_14720 putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HIBPF_02690 predicted lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D HIBPF_09070 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D HIBPF_10520 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HIBPF_04550 peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D HIBPF_01780 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:hif03110]
D HIBPF_14490 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HIBPF_16680 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HIBPF_18350 molecular chaperone and ATPase component of HslUV protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HIBPF_06120 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D HIBPF_03200 chaperone protein HscA K04044 hscA; molecular chaperone HscA
D HIBPF_17860 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HIBPF_06130 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D HIBPF_02140 DnaJ-like protein, membrane anchored K05801 djlA; DnaJ like chaperone protein
D HIBPF_03220 Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D HIBPF_15000 heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33
D HIBPF_00710 GrpE nucleotide exchange factor K03687 GRPE; molecular chaperone GrpE
D HIBPF_17660 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D HIBPF_17870 10 kDa chaperonin K04078 groES; chaperonin GroES
D HIBPF_08565 putative uncharacterised protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HIBPF_08170 protease, ATP-dependent zinc-metallo K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HIBPF_18450 F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HIBPF_15650 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HIBPF_12190 chaperone protein homolog K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D HIBPF_00790 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HIBPF_12460 peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D HIBPF_17540 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D HIBPF_16880 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D HIBPF_18710 survival protein SurA homolog K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D HIBPF_00820 thioredoxin K03671 TXN; thioredoxin
D HIBPF_11150 thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin
D HIBPF_08790 glutaredoxin K03674 grxA; glutaredoxin 1
D HIBPF_11060 conserved glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D HIBPF_10490 conserved hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HIBPF_14620 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D HIBPF_19040 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D HIBPF_10510 protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HIBPF_14270 Thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D HIBPF_11720 periplasmic thioredoxin of cytochrome c-type biogenesis K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D HIBPF_13710 Thiol-disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:hif04131]
D HIBPF_14360 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HIBPF_00010 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HIBPF_15540 phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HIBPF_09780 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:hif04121]
C 03051 Proteasome [BR:hif03051]
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hif03032]
D HIBPF_19620 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HIBPF_04320 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_07341 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_19020 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D HIBPF_08380 integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HIBPF_05970 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D HIBPF_12540 chromosomal replication initiator protein DnaA,DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D HIBPF_09790 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HIBPF_17970 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_15670 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HIBPF_12550 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HIBPF_07640 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HIBPF_13880 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HIBPF_18750 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HIBPF_19610 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HIBPF_06050 DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HIBPF_00110 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HIBPF_12070 ribonuclease HII, degrades RNA of DNA-RNA hybrids K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HIBPF_20400 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_18010 putative adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_20240 SeqA regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D HIBPF_06020 ATPase regulatory factor involved in DnaA inactivation K10763 hda; DnaA-homolog protein
D HIBPF_06490 DNA gyrase (type II topoisomerase), subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HIBPF_17610 DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HIBPF_08760 DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HIBPF_08750 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HIBPF_07230 DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HIBPF_18880 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hif03036]
D HIBPF_04320 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_07341 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_00140 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HIBPF_09910 DNA-binding protein H-NS homolog K03746 hns; DNA-binding protein H-NS
D HIBPF_19020 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D HIBPF_08380 integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HIBPF_05970 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D HIBPF_12540 chromosomal replication initiator protein DnaA,DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D HIBPF_05840 conserved hypothetical protein K12961 diaA; DnaA initiator-associating protein
D HIBPF_07060 DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HIBPF_12690 DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HIBPF_19240 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D HIBPF_01630 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HIBPF_09970 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HIBPF_14680 nucleotide associated protein K06899 ndpA; nucleoid-associated protein
D HIBPF_07340 cell division protein MukB K03632 mukB; chromosome partition protein MukB
D HIBPF_07330 cell division protein MukE K03804 mukE; chromosome partition protein MukE
D HIBPF_07320 mukF; chromosome segregation and condensation protein MukF homolog K03633 mukF; chromosome partition protein MukF
D HIBPF_11330 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HIBPF_17130 Cell division protein ftsB K05589 ftsB; cell division protein FtsB
D HIBPF_15430 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HIBPF_11430 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D HIBPF_09960 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HIBPF_11440 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HIBPF_14160 Cell division protein K03591 ftsN; cell division protein FtsN
D HIBPF_11340 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D HIBPF_11380 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HIBPF_15420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HIBPF_11320 GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D HIBPF_11670 Cell division protein ZipA K03528 zipA; cell division protein ZipA
D HIBPF_14510 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D HIBPF_17180 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D HIBPF_00650 probable N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HIBPF_14180 predicted membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D HIBPF_13470 HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D HIBPF_20240 SeqA regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D HIBPF_00410 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HIBPF_00420 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HIBPF_00430 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HIBPF_00350 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D HIBPF_08760 DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HIBPF_08750 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HIBPF_17450 glucose-inhibited cell-division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HIBPF_18430 methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HIBPF_17080 site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D HIBPF_02540 Site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D HIBPF_06620 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HIBPF_11550 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hif03400]
D HIBPF_19330 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HIBPF_00220 uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HIBPF_15520 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HIBPF_05530 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HIBPF_14030 mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HIBPF_13480 deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HIBPF_16250 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HIBPF_13570 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HIBPF_00450 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HIBPF_10500 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HIBPF_11680 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HIBPF_14520 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HIBPF_01930 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D HIBPF_06220 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HIBPF_00540 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HIBPF_10780 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HIBPF_18190 RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HIBPF_18200 DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HIBPF_15080 RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HIBPF_20630 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HIBPF_06420 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HIBPF_16760 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HIBPF_00660 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HIBPF_19320 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D HIBPF_07380 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D HIBPF_19380 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HIBPF_07860 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HIBPF_15670 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HIBPF_12550 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HIBPF_07640 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D HIBPF_13880 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HIBPF_18750 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HIBPF_19610 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HIBPF_06050 DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HIBPF_00110 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_20400 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_18010 putative adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_08281 Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D HIBPF_13610 exonuclease V (RecBCD complex), gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D HIBPF_08280 exonuclease V (RecBCD complex), alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HIBPF_16110 recA; RecA K03553 recA; recombination protein RecA
D HIBPF_02570 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HIBPF_02560 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HIBPF_02580 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HIBPF_02890 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HIBPF_17830 primosomal replication protein N K02686 priB; primosomal replication protein N
D HIBPF_02670 predicted primosomal replication protein N K04067 priC; primosomal replication protein N''
D HIBPF_09980 predicted repair protein K04485 radA; DNA repair protein RadA/Sms
D HIBPF_12560 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HIBPF_20610 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HIBPF_01470 predicted transcriptional regulator containing an HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HIBPF_02720 DNA repair protein Rec0 K03584 recO; DNA repair protein RecO (recombination protein O)
D HIBPF_18890 recombination protein RecR K06187 recR; recombination protein RecR
D HIBPF_00690 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HIBPF_02510 recombination associated protein K03554 rdgC; recombination associated protein RdgC
D HIBPF_06490 DNA gyrase (type II topoisomerase), subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HIBPF_17610 DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HIBPF_07230 DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HIBPF_19020 DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D HIBPF_04230 Predicted recombinational DNA repair protein,RecE pathway K07455 recT; recombination protein RecT
D HIBPF_09720 Recombinational DNA repair protein, RecE pathway K07455 recT; recombination protein RecT
D HIBPF_12690 DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D HIBPF_08380 integration host factor (IHF), DNA-binding protein, alpha subunit K04764 ihfA; integration host factor subunit alpha
D HIBPF_05970 Integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D HIBPF_15790 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D HIBPF_09910 DNA-binding protein H-NS homolog K03746 hns; DNA-binding protein H-NS
D HIBPF_15600 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HIBPF_16120 recX; regulatory protein RecX K03565 recX; regulatory protein
D HIBPF_16300 DNA helicase and single-stranded DNA-dependent ATPase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D HIBPF_19480 probable ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HIBPF_05820 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HIBPF_05810 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hif03029]
D HIBPF_06810 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HIBPF_08320 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HIBPF_13980 protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D HIBPF_16470 Translation elongation factor K02358 tuf; elongation factor Tu
D HIBPF_17490 Elongation factor Tu K02358 tuf; elongation factor Tu
D HIBPF_17480 protein chain elongation factor EF-G,GTP-binding K02355 fusA; elongation factor G
D HIBPF_00130 GTP-binding protein era homolog K03595 era; GTPase
D HIBPF_10110 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HIBPF_13900 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HIBPF_02610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HIBPF_09860 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HIBPF_04270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_01940 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_09750 ssb3; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HIBPF_13940 protective surface antigen K07277 SAM50; outer membrane protein insertion porin family
D HIBPF_06120 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D HIBPF_00710 GrpE nucleotide exchange factor K03687 GRPE; molecular chaperone GrpE
D HIBPF_17860 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HIBPF_17870 10 kDa chaperonin K04078 groES; chaperonin GroES
D HIBPF_06130 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D HIBPF_03250 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HIBPF_03220 Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D HIBPF_11060 conserved glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D HIBPF_06620 antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D HIBPF_12480 Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hif02000]
D HIBPF_00570 msbA; lipid A export ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D HIBPF_12120 conserved hypothetical ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D HIBPF_11180 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D HIBPF_11170 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D HIBPF_17240 probable ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D HIBPF_00400 conserved hypothetical ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HIBPF_08630 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D HIBPF_06980 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HIBPF_05330 molybdate transporter subunit K02020 modA; molybdate transport system substrate-binding protein
D HIBPF_08720 Bacterial extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HIBPF_05340 molybdate transporter subunit K02018 modB; molybdate transport system permease protein
D HIBPF_08710 Binding-protein-dependent transport system, inner membrane component K02018 modB; molybdate transport system permease protein
D HIBPF_05350 molybdate transporter subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HIBPF_08700 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HIBPF_01380 hitA; iron-utilization periplasmic protein hFbpA K02012 afuA; iron(III) transport system substrate-binding protein
D HIBPF_01390 hitB; iron(III)-transport system permease protein hFbpB K02011 afuB; iron(III) transport system permease protein
D HIBPF_01400 hitC; iron-utilization ATP-binding protein hFbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HIBPF_12390 thiamine ABC transporter periplasmic-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D HIBPF_12380 thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D HIBPF_12370 thiamin transporter subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D HIBPF_07000 Bacterial extracellular solute-binding protein,family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HIBPF_18340 spermidine/putrescine-binding periplasmic protein 2 precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HIBPF_07010 polyamine transporter subunit K11070 potC; spermidine/putrescine transport system permease protein
D HIBPF_07020 polyamine transporter subunit K11071 potB; spermidine/putrescine transport system permease protein
D HIBPF_07030 polyamine transporter subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HIBPF_03050 putative ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D HIBPF_03040 putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D HIBPF_03030 putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D HIBPF_14860 D-galactose-binding periplasmic protein precursor K10540 mglB; methyl-galactoside transport system substrate-binding protein
D HIBPF_14840 Beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D HIBPF_14850 Galactoside transport ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D HIBPF_18280 D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D HIBPF_18290 D-ribose transporter subunit K10440 rbsC; ribose transport system permease protein
D HIBPF_18300 fused D-ribose transporter subunits of ABC superfamily: ATP-binding components K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HIBPF_11820 conserved ABC-type transport system protein,periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D HIBPF_11810 conserved ABC-type transport system protein,permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D HIBPF_11800 conserved ABC-type transport system protein,ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D HIBPF_11830 conserved ABC-type transport system protein K07323 mlaC; phospholipid transport system substrate-binding protein
D HIBPF_11840 predicted NTP binding protein, contains STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D HIBPF_07440 phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D HIBPF_07430 phosphate transporter subunit K02037 pstC; phosphate transport system permease protein
D HIBPF_07420 phosphate transporter subunit K02038 pstA; phosphate transport system permease protein
D HIBPF_07410 phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HIBPF_10860 arginine-binding periplasmic protein K09997 artI; arginine transport system substrate-binding protein
D HIBPF_10880 arginine transporter subunit K09998 artM; arginine transport system permease protein
D HIBPF_10870 arginine transporter subunit K09999 artQ; arginine transport system permease protein
D HIBPF_10850 arginine transporter subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D HIBPF_11870 Bacterial extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HIBPF_11880 probable amino-acid ABC transporter permease protein K10009 tcyB; L-cystine transport system permease protein
D HIBPF_11890 probable amino-acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HIBPF_15900 DL-methionine transporter subunit K02073 metQ; D-methionine transport system substrate-binding protein
D HIBPF_15890 DL-methionine transporter subunit K02072 metI; D-methionine transport system permease protein
D HIBPF_15880 DL-methionine transporter subunit K02071 metN; D-methionine transport system ATP-binding protein
D HIBPF_11490 oligopeptide transporter subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D HIBPF_11500 oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D HIBPF_11510 oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D HIBPF_11520 oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D HIBPF_11530 oligopeptide transporter subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D HIBPF_14550 hbpA; heme-binding lipoprotein K12368 dppA; dipeptide transport system substrate-binding protein
D HIBPF_10790 dipeptide transporter K12369 dppB; dipeptide transport system permease protein
D HIBPF_10800 dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D HIBPF_10810 dipeptide transporter K12371 dppD; dipeptide transport system ATP-binding protein
D HIBPF_10820 dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D HIBPF_10380 predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D HIBPF_10390 predicted antimicrobial peptide transporter subunit K19227 sapB; cationic peptide transport system permease protein
D HIBPF_10400 predicted antimicrobial peptide transporter subunit K19228 sapC; cationic peptide transport system permease protein
D HIBPF_10410 predicted antimicrobial peptide transporter subunit K19229 sapD; cationic peptide transport system ATP-binding protein
D HIBPF_10420 predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D HIBPF_20440 putative ABC-type oligopeptide transport system,periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HIBPF_08680 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D HIBPF_08670 vitamin B12 transporter subunit: membrane component of ABC superfamily K02015 ABC.FEV.P; iron complex transport system permease protein
D HIBPF_08660 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HIBPF_04460 High-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D HIBPF_19280 high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D HIBPF_19270 zinc transporter subunit: ATP-binding component of ABC superfamily K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HIBPF_03100 hfeA; putative periplasmic chelated iron binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D HIBPF_03080 hfeC; putative ABC-type chelated iron transport system,permease component K11605 sitC; manganese/iron transport system permease protein
D HIBPF_03070 hfeD; putative ABC-type chelated iron transport system,permease component K11606 sitD; manganese/iron transport system permease protein
D HIBPF_03090 hfeB; putative ABC-type chelated iron transport system,ATPase component K11607 sitB; manganese/iron transport system ATP-binding protein
D HIBPF_10210 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D HIBPF_10220 Cobalamin (vitamin B12) biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D HIBPF_10200 Uncharacterized ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HIBPF_10240 putative ABC-type Co2+ transport system,periplasmic component K10094 cbiK; nickel transport protein
D HIBPF_10230 conserved hypothetical protein K16915 cbiL; nickel transport protein
D HIBPF_05010 conserved inner membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D HIBPF_05030 conserved inner membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D HIBPF_11270 predicted transporter subunit: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D HIBPF_08920 outer membrane-specific lipoprotein transporter subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HIBPF_08990 outer membrane-specific lipoprotein transporter subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D HIBPF_08930 outer membrane-specific lipoprotein transporter subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D HIBPF_11760 heme exporter protein C K02195 ccmC; heme exporter protein C
D HIBPF_11770 heme exporter protein B K02194 ccmB; heme exporter protein B
D HIBPF_11780 heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D HIBPF_15420 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HIBPF_15430 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HIBPF_16020 Sodium/sulfate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D HIBPF_10130 multidrug efflux system transporter K26939 norM; MATE family, multidrug efflux pump
D HIBPF_16000 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D HIBPF_02530 probable 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D HIBPF_16980 sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D HIBPF_03000 putative integral membrane signal transducer protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D HIBPF_06170 bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D HIBPF_19590 probable sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D HIBPF_14150 multidrug efflux system protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D HIBPF_04740 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HIBPF_04730 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HIBPF_18820 PTS system, fructose-specific IIA/FPr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D HIBPF_04750 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HIBPF_18840 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HIBPF_11280 sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HIBPF_01570 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D HIBPF_07900 stringent starvation protein A K03599 sspA; stringent starvation protein A
D HIBPF_00480 conserved hypothetical membrane protein K19416 yccA; modulator of FtsH protease
D HIBPF_20110 formate transporter K06212 focA; formate transporter
D HIBPF_16521 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D HIBPF_20260 putative small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel
D HIBPF_01970 transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D HIBPF_01960 transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D HIBPF_19500 membrane spanning protein in TolA-TolQ-TolR complex K03562 tolQ; biopolymer transport protein TolQ
D HIBPF_19510 membrane spanning protein in TolA-TolQ-TolR complex K03560 tolR; biopolymer transport protein TolR
D HIBPF_12310 magnesium and cobalt transport protein K03284 corA; magnesium transporter
D HIBPF_16130 predicted inner membrane protein associated with chromosome condensation, CrcB K06199 crcB; fluoride exporter
D HIBPF_18780 predicted inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HIBPF_01520 putative Mg2+ and Co2+ transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HIBPF_11061 ompA; outer membrane protein p5 precursor (omp p5) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D HIBPF_19340 Outer membrane protein P1 K06076 fadL; long-chain fatty acid transport protein
D HIBPF_10153 haf2C; hafC fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_02770 aef2C; putative F17-like fimbrial usher K07347 fimD; outer membrane usher protein
D HIBPF_00190 aef1C; Fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_11222 hafC; hafC usher protein K07347 fimD; outer membrane usher protein
D HIBPF_05420 aef3C; Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HIBPF_12570 Iga1 protease type 2 K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D HIBPF_10470 hup; TonB-dependent receptor, beta-barrel domain K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HIBPF_12530 tbpA; transferrin-binding protein 1 K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HIBPF_01580 hemR; TonB-dependent heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HIBPF_02060 hxuC; heme/hemopexin-binding protein C K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HIBPF_17250 hgpB; hemoglobin-haptoglobin binding protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D HIBPF_13940 protective surface antigen K07277 SAM50; outer membrane protein insertion porin family
D HIBPF_02000 Conserved hypothetical lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D HIBPF_19990 predicted lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D HIBPF_14690 small protein A K06186 bamE; outer membrane protein assembly factor BamE
D HIBPF_16890 predicted outer membrane protein and surface antigen K07278 tamA; translocation and assembly module TamA
D HIBPF_16900 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D HIBPF_06240 tabA1; putative trimeric autotransporter adhesin K21449 ata; trimeric autotransporter adhesin
D HIBPF_07130 tabA3; putative trimeric autotransporter adhesin K21449 ata; trimeric autotransporter adhesin
D HIBPF_14450 tabA6; putative trimeric autotransporter adhesin K21449 ata; trimeric autotransporter adhesin
D HIBPF_11260 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D HIBPF_15770 LPS-assembly protein K04744 lptD; LPS-assembly protein
D HIBPF_13890 conserved predicted lipoprotein K03643 lptE; LPS-assembly lipoprotein
D HIBPF_02460 magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D HIBPF_06950 conserved inner membrane protein K06518 cidA; holin-like protein
D HIBPF_17390 putative amino acid permease K03759 adiC; arginine:agmatine antiporter
D HIBPF_14170 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D HIBPF_01620 conserved hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D HIBPF_17040 conserved hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D HIBPF_02660 conserved hypothetical protein K07084 yuiF; putative amino acid transporter
D HIBPF_19770 anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HIBPF_15630 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D HIBPF_10460 putative L-lactate permease K03303 lutP; lactate permease
D HIBPF_18210 potassium-tellurite ethidium and proflavin transporter K03304 tehA; tellurite resistance protein
D HIBPF_12730 Sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D HIBPF_07090 sodium/proline symporter K11928 putP; sodium/proline symporter
D HIBPF_08890 sodium:serine/threonine symporter K07862 sstT; serine/threonine transporter
D HIBPF_08770 glutamate transporter K03312 gltS; glutamate:Na+ symporter, ESS family
D HIBPF_01640 Na(+)/H(+) antiporter 1 K03313 nhaA; Na+:H+ antiporter, NhaA family
D HIBPF_19050 sodium:proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D HIBPF_09900 predicted Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D HIBPF_14020 glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D HIBPF_16580 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D HIBPF_16540 NAD-binding component of TrK potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D HIBPF_06030 probable uracil transporter K02824 uraA; uracil permease
D HIBPF_19550 predicted permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HIBPF_18060 Tyrosine-specific transport protein 2 K03834 tyrP; tyrosine-specific transport protein
D HIBPF_18530 tyrosine transporter K03834 tyrP; tyrosine-specific transport protein
D HIBPF_02290 tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D HIBPF_02320 predicted serine transporter K03837 sdaC; serine transporter
D HIBPF_19700 putative sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein
D HIBPF_17290 Predicted C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D HIBPF_12830 putative virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D HIBPF_08440 threonine efflux system K05835 rhtC; threonine efflux protein
D HIBPF_04510 predicted branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump
D HIBPF_04520 predicted branched-chain amino acid permease K26606 azlD; branched chain amino acid efflux pump
D HIBPF_01800 putative permease PerM homolog K03548 perM; putative permease
D HIBPF_14430 putative uncharacterised protein K09125 yhhQ; queuosine precursor transporter
D HIBPF_11380 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HIBPF_06330 predicted ABC-type transport system, permease component K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D HIBPF_01950 TonB K03832 tonB; periplasmic protein TonB
D HIBPF_19530 peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D HIBPF_19511 outer membrane integrity protein (tolA) K03646 tolA; colicin import membrane protein
D HIBPF_19520 TolB protein K03641 tolB; TolB protein
D HIBPF_08010 Conserved hypothetical cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D HIBPF_12160 dimethyl sulfoxide reductase, anaerobic, subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D HIBPF_12170 oxidoreductase, Fe-S subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D HIBPF_12180 oxidoreductase, membrane subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D HIBPF_14140 multidrug efflux system K03543 emrA; membrane fusion protein, multidrug efflux system
D HIBPF_14180 predicted membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D HIBPF_11900 nicotinamide riboside transporter K03811 pnuC; nicotinamide mononucleotide transporter
D HIBPF_11730 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D HIBPF_16340 predicted Mg(2+) transport ATPase inner membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:hif02044]
D HIBPF_03130 conserved hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D HIBPF_13680 conserved hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A
D HIBPF_13670 conserved hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B
D HIBPF_13650 conserved hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D HIBPF_02431 pilA; putative type IV pilin secretion protein K02682 ppdD; prepilin peptidase dependent protein D
D HIBPF_02430 pilB; putative type IV pilin secretion protein K02504 hofB; protein transport protein HofB
D HIBPF_02420 pilC; putative type IV pilin secretion protein K02505 hofC; protein transport protein HofC
D HIBPF_18970 comE; competence protein E K02507 hofQ; protein transport protein HofQ
D HIBPF_12300 predicted inner membrane protein K02221 yggT; YggT family protein
D HIBPF_12410 comE1; conserved hypothetical protein K02237 comEA; competence protein ComEA
D HIBPF_00580 rec-2; conserved inner membrane protein K02238 comEC; competence protein ComEC
D HIBPF_17711 conserved hypothetical protein K02242 comFC; competence protein ComFC
D HIBPF_10510 protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D HIBPF_12570 Iga1 protease type 2 K01347 iga; IgA-specific serine endopeptidase [EC:3.4.21.72]
D HIBPF_10152 haf2D; hafD pilus protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_10160 haf2A; hafA major pilus protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_02730 aef2A; putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_05380 aef3A; Major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_00170 aef1A; Fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_11221 hafD; hafD pilin protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_11230 hafA; hafA major pilin protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_05460 aef3D; Fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_10153 haf2C; hafC fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_02770 aef2C; putative F17-like fimbrial usher K07347 fimD; outer membrane usher protein
D HIBPF_00190 aef1C; Fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_11222 hafC; hafC usher protein K07347 fimD; outer membrane usher protein
D HIBPF_05420 aef3C; Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D HIBPF_14040 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HIBPF_15650 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D HIBPF_01820 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D HIBPF_16670 preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D HIBPF_01810 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D HIBPF_18870 protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D HIBPF_15130 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D HIBPF_01500 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HIBPF_15440 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HIBPF_01830 conserved hypothetical preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HIBPF_12480 Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HIBPF_20170 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D HIBPF_20180 Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D HIBPF_20190 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hif02042]
D HIBPF_18780 predicted inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HIBPF_01520 putative Mg2+ and Co2+ transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hif02022]
D HIBPF_07390 sensory histidine kinase in two-component regulatory system with PhoB K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HIBPF_07400 DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D HIBPF_14700 transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D HIBPF_04800 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D HIBPF_04790 transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D HIBPF_20560 Sensor protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D HIBPF_14280 DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D HIBPF_02110 sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D HIBPF_15821 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
C 02035 Bacterial motility proteins [BR:hif02035]
D HIBPF_11870 Bacterial extracellular solute-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HIBPF_03130 conserved hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D HIBPF_10152 haf2D; hafD pilus protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_10160 haf2A; hafA major pilus protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_02730 aef2A; putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_05380 aef3A; Major fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_00170 aef1A; Fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_11221 hafD; hafD pilin protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_11230 hafA; hafA major pilin protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_05460 aef3D; Fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D HIBPF_10153 haf2C; hafC fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_02770 aef2C; putative F17-like fimbrial usher K07347 fimD; outer membrane usher protein
D HIBPF_00190 aef1C; Fimbrial usher protein K07347 fimD; outer membrane usher protein
D HIBPF_11222 hafC; hafC usher protein K07347 fimD; outer membrane usher protein
D HIBPF_05420 aef3C; Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hif04812]
D HIBPF_00410 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HIBPF_11320 GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D HIBPF_11330 cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:hif04147]
D HIBPF_01440 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D HIBPF_13730 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HIBPF_00010 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HIBPF_18090 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HIBPF_09780 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HIBPF_17860 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HIBPF_06120 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D HIBPF_09810 glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HIBPF_01600 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HIBPF_16470 Translation elongation factor K02358 tuf; elongation factor Tu
D HIBPF_17490 Elongation factor Tu K02358 tuf; elongation factor Tu
D HIBPF_12860 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HIBPF_19450 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_00020 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HIBPF_02990 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HIBPF_06060 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HIBPF_14990 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HIBPF_04630 argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HIBPF_10450 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D HIBPF_14890 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HIBPF_14400 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HIBPF_18640 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HIBPF_14250 bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HIBPF_06070 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HIBPF_17700 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HIBPF_17060 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HIBPF_15540 phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:hif02048]
D HIBPF_01490 hsdR1; putative type I site-specific restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HIBPF_20530 hsdR2; putative type I restriction-modification system K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HIBPF_06820 hsdR3; putative type I restriction enzyme HindVIIP R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HIBPF_01480 hsdS1; putative type I site-specific restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HIBPF_06830 putative type I restriction enzyme K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HIBPF_01460 hsdM1; putative type I restriction-modification system,methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HIBPF_20470 hsdM2; putative type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HIBPF_06860 hsdM3; putative type I restriction enzyme HindVIIP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HIBPF_01870 HaeIVRM; HaeIV restriction/modification system K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HIBPF_20400 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_18010 putative adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HIBPF_18000 putative adenine-specific DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HIBPF_04200 DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HIBPF_04320 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_07341 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HIBPF_12081 putative type III restriction-modification system enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D HIBPF_16840 putative type III restriction-modification system endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D HIBPF_12080 putative type III restriction-modification system HindVIP enzyme mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HIBPF_16860 putative type III restriction-modification system methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HIBPF_06630 PemK-like protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D HIBPF_02820 hypothetical protein K18842 chpS; antitoxin ChpS
D HIBPF_13840 stbD; predicted antitoxin of the YafO-YafN toxin-antitoxin system K18923 stbD; antitoxin StbD
D HIBPF_06351 addiction module antitoxin/putative RelE toxin-like protein, plasmid stabilization system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HIBPF_17220 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HIBPF_13250 putative uncharacterized protein K18843 hicB; antitoxin HicB
D HIBPF_01260 putative plasmid stabilisation system K19092 parE1_3_4; toxin ParE1/3/4
D HIBPF_00900 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D HIBPF_00910 plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D HIBPF_07110 putative uncharacterised protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D HIBPF_11320 GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D HIBPF_00410 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HIBPF_08760 DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HIBPF_08750 DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HIBPF_02180 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HIBPF_16520 conserved hypothetical protein K09159 cptB; antitoxin CptB
D HIBPF_03250 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hif04090]
C 01504 Antimicrobial resistance genes [BR:hif01504]
D HIBPF_09900 predicted Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D HIBPF_14180 predicted membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D HIBPF_14170 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D HIBPF_02380 probable heavy metal dependent transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hif00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hif03100]
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-6 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-7 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-5 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Trp-2 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HIBPF_16310 NADPH quinone reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D HIBPF_08020 peptide methionine sulfoxide reductase MsrA/MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HIBPF_01980 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HIBPF_15580 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HIBPF_07710 putative uncharacterised protein K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D HIBPF_07450 ferritin like protein 1 K02217 ftnA; ferritin [EC:1.16.3.2]
D HIBPF_07460 ferritin like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2]
D HIBPF_01790 putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HIBPF_11190 anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HIBPF_20010 pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HIBPF_18140 Predicted pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HIBPF_06560 tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D HIBPF_02470 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D HIBPF_08690 putative pyrophosphorylase modD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D HIBPF_14090 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HIBPF_19940 predicted thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HIBPF_00680 glutamate-ammonia ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D HIBPF_19490 predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D HIBPF_07670 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HIBPF_08130 phosphohistidine phosphatase SixA homolog K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D HIBPF_00800 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HIBPF_05770 conserved putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HIBPF_18760 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HIBPF_20230 putative esterase/lipase K01175 ybfF; esterase [EC:3.1.-.-]
D HIBPF_00990 lysozyme precursor phage protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D HIBPF_04829 N-acetylmuramoyl-L-alanine amidase-like protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HIBPF_16570 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HIBPF_07610 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D HIBPF_09990 putative uncharacterised protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D HIBPF_08561 Predicted selenocysteine lyase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D HIBPF_06930 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D HIBPF_19720 N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D HIBPF_15980 L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D HIBPF_11960 ATP-dependent helicase K03578 hrpA; ATP-dependent helicase HrpA [EC:5.6.2.6]
D HIBPF_04440 UDP-N-acetylmuramate:L-alanyl-gamma-D-gluta myl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D HIBPF_10830 ATP dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D HIBPF_05560 predicted inner membrane oxidoreductase K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D HIBPF_05570 predicted NADH:ubiquinone oxidoreductase, subunit RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D HIBPF_05580 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D HIBPF_19880 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D HIBPF_19890 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D HIBPF_19900 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D HIBPF_19910 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D HIBPF_19920 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D HIBPF_19930 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D HIBPF_10120 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D HIBPF_00050 formate dehydrogenase formation protein K02379 fdhD; FdhD protein
D HIBPF_03190 ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D HIBPF_08420 predicted 2Fe-2S cluster-containing protein K11107 yfaE; ferredoxin
D HIBPF_05550 predicted oxidoreductase K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D HIBPF_05540 predicted inner membrane NADH-quinone reductase K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D HIBPF_05590 predicted inner membrane subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D HIBPF_17170 FMN-binding protein MioC K06205 mioC; MioC protein
D HIBPF_03240 NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D HIBPF_02930 NapD K02570 napD; periplasmic nitrate reductase NapD
D HIBPF_02920 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D HIBPF_13700 cytochrome c-type biogenesis protein NrfE K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D HIBPF_20220 fur; ferric iron uptake regulator K03839 fldA; flavodoxin I
D HIBPF_02980 cytochrome C-type protein NapC K02569 napC; cytochrome c-type protein NapC
D HIBPF_02950 ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG
D HIBPF_02960 ferredoxin-type protein NapH K02574 napH; ferredoxin-type protein NapH
D HIBPF_11990 NrfB, cytochrome c-type protein K04013 nrfB; cytochrome c-type protein NrfB
D HIBPF_12000 formate-dependent nitrite reductase, 4Fe4S subunit K04014 nrfC; protein NrfC
D HIBPF_12010 NrfD, formate-dependent nitrite reductase,membrane component K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HIBPF_11660 predicted inner membrane protein K06203 cysZ; CysZ protein
D HIBPF_01320 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HIBPF_05980 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D HIBPF_05990 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D HIBPF_05090 lsgD; putative UDP-glcNAc--lipooligosaccharide N-acetylglucosaminyl glycosyltransferase K07270 K07270; glycosyl transferase, family 25
D HIBPF_15461 lpsA; lipooligosaccharide biosynthesis protein K07270 K07270; glycosyl transferase, family 25
D HIBPF_15560 lex2B; UDP-glucose--lipooligosaccharide glucosyltransferase K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D HIBPF_16080 HemY porphyrin biosynthesis protein K02498 hemY; HemY protein
D HIBPF_14570 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D HIBPF_15760 SufI K04753 sufI; suppressor of ftsI
C 99999 Others
D HIBPF_14260 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D HIBPF_10030 conserved hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HIBPF_07810 cold shock protein homolog K03704 cspA; cold shock protein
D HIBPF_13290 putative phage anti-repressor protein K07741 antB; anti-repressor protein
D HIBPF_17600 predicted transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D HIBPF_16700 bacterial trigger factor K03545 tig; trigger factor
D HIBPF_17910 ureE; Urease accessory protein ureE K03187 ureE; urease accessory protein
D HIBPF_17920 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D HIBPF_17930 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D HIBPF_17940 ureH; Urease accessory protein UreH K03190 ureD; urease accessory protein
D HIBPF_12680 SsrA-binding protein K03664 smpB; SsrA-binding protein
D HIBPF_07570 hydrogenase 2 accessory protein K04653 hypC; hydrogenase expression/formation protein HypC
D HIBPF_11560 ComM; competence protein ComM K07391 comM; magnesium chelatase family protein
D HIBPF_18990 Fe/S biogenesis protein nfu K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D HIBPF_13500 DNA repair protein RadC homolog K03630 radC; DNA repair protein RadC
D HIBPF_18320 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D HIBPF_05850 conserved hypothetical protein K07460 yraN; putative endonuclease
D HIBPF_12640 DNA processing chain A (dprA) K04096 smf; DNA processing protein
D HIBPF_06740 conserved hypothetical protein K07474 xtmA; phage terminase small subunit
D HIBPF_03890 predicted phage terminase large subunit K06909 xtmB; phage terminase large subunit
D HIBPF_09420 predicted phage terminase large subunit K06909 xtmB; phage terminase large subunit
D HIBPF_09940 predicted ATPase K07478 ycaJ; putative ATPase
D HIBPF_16220 predicted DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D HIBPF_06680 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase
D HIBPF_06260 IS1016-V6; IS1016-V6 K07488 K07488; transposase
D HIBPF_13420 phage transposase K07497 K07497; putative transposase
D HIBPF_04940 Transposase K07497 K07497; putative transposase
D HIBPF_18380 Uncharacterized transposase-like protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HIBPF_18900 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HIBPF_10050 putative phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HIBPF_15720 conserved hypothetical sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HIBPF_14290 Sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HIBPF_20130 putative Na+/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HIBPF_01660 predicted branched chain amino acid transporter (LIV-II) K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D HIBPF_18150 predicted nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D HIBPF_00240 predicted transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D HIBPF_00390 conserved hypothetical membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
D HIBPF_14820 probable intracellular septation protein A K06190 ispZ; intracellular septation protein
D HIBPF_15541 membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D HIBPF_16100 sxy; DNA transformation protein TfoX K07343 tfoX; DNA transformation protein and related proteins
D HIBPF_10154 haf2B; hafB periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D HIBPF_02750 aef2B; putative F17-like fimbrial chaperone K15540 ecpD; chaperone protein EcpD
D HIBPF_05400 aef3B; Periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D HIBPF_11223 hafB; hafB periplasmic chaperone K15540 ecpD; chaperone protein EcpD
D HIBPF_00180 aef1B; putative fimbrial chaperone protein K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D HIBPF_05730 predicted structural transport element K03607 proQ; ProP effector
D HIBPF_14930 universal stress global response regulator K06149 uspA; universal stress protein A
D HIBPF_07700 universal stress protein E, UspE K14055 uspE; universal stress protein E
D HIBPF_14410 GTP-binding protein K06207 typA; GTP-binding protein
D HIBPF_10060 conserved hypothetical protein K07184 ygiM; SH3 domain protein
D HIBPF_12320 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D HIBPF_09950 outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D HIBPF_10080 Outer-membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D HIBPF_16650 VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D HIBPF_09830 outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D HIBPF_13950 outer membrane chaperone K06142 hlpA; outer membrane protein
D HIBPF_16761 Lipoprotein K06194 nlpD; lipoprotein NlpD
D HIBPF_01740 Lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D HIBPF_02700 opacity associated protein OapA K07268 oapA; opacity associated protein
D HIBPF_12520 conserved hypothetical protein K07280 K07280; outer membrane protein
D HIBPF_19460 outer membrane lipoprotein K07285 slp; outer membrane lipoprotein
D HIBPF_19860 conserved hypothetical lipoprotein K07286 yajG; uncharacterized lipoprotein
D HIBPF_02880 conserved hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D HIBPF_11740 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D HIBPF_13711 Cytochrome C-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D HIBPF_03140 conserved hypothetical transcriptional regulator with an N-terminal xre-type HTH domain K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D HIBPF_15800 frataxin, iron-binding and oxidizing protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HIBPF_10580 membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D HIBPF_09510 Conserved hypothetical protein K03791 K03791; putative chitinase
D HIBPF_00210 grcA; conserved hypothetical acid-induced glycyl radical enzyme K06866 grcA; autonomous glycyl radical cofactor
D HIBPF_04670 conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D HIBPF_02200 trna-processing ribonuclease K07058 K07058; membrane protein
D HIBPF_08562 putative uncharacterised protein K02426 sufE; cysteine desulfuration protein SufE
D HIBPF_16420 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D HIBPF_17550 protein SlyX homologue K03745 slyX; SlyX protein
D HIBPF_10980 putative uncharacterised protein K02742 sprT; SprT protein
D HIBPF_06470 SanA K03748 sanA; SanA protein
D HIBPF_05720 paraquat-inducible protein A-like protein K03808 pqiA; paraquat-inducible protein A
D HIBPF_00470 conserved hypothetical membrane protein K08990 ycjF; putative membrane protein
D HIBPF_02210 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D HIBPF_16090 PsiE; predicted phosphate starvation inducible protein,PsiE K13256 psiE; protein PsiE
D HIBPF_00510 PhnA homologue K06193 phnA; protein PhnA
D HIBPF_20550 conserved inner membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D HIBPF_04808 phage baseplate-like protein K06903 W; Bacteriophage baseplate protein W
D HIBPF_04810 Regulator-like protein K06905 D; Bacteriophage probable baseplate hub protein
D HIBPF_04815 Tail sheath-like protein K06907 FI; Bacteriophage tail sheath protein
D HIBPF_04814 Tail core-like protein K06908 FII; Bacteriophage tail tube protein
D HIBPF_10370 conserved protein with nucleoside triphosphate hydrolase domain K06918 K06918; uncharacterized protein
D HIBPF_08502 hmcC; haemocin bacteriocin C K06992 K06992; uncharacterized protein
D HIBPF_14660 predicted hydrolase, inner membrane K07014 K07014; uncharacterized protein
D HIBPF_10560 conserved protein with NAD(P)-binding Rossmann-fold domain K07071 K07071; uncharacterized protein
D HIBPF_14100 conserved hypothetical protein K07090 K07090; uncharacterized protein
D HIBPF_20290 conserved inner membrane protein K07090 K07090; uncharacterized protein
D HIBPF_15040 conserved hypothetical protein K07090 K07090; uncharacterized protein
D HIBPF_07720 putative uncharacterised protein K07090 K07090; uncharacterized protein
D HIBPF_00490 conserved hypothetical protein K07109 K07109; uncharacterized protein
D HIBPF_05860 putative lipoprotein K07121 K07121; uncharacterized protein
D HIBPF_10260 conserved hypothetical protein, Sel1 repeat domain K07126 K07126; uncharacterized protein
D HIBPF_06580 bpf001; bpf001 K07126 K07126; uncharacterized protein
D HIBPF_09060 conserved hypothetical protein K07126 K07126; uncharacterized protein
D HIBPF_12280 Conserved hypothetical protein K07133 K07133; uncharacterized protein
D HIBPF_18120 putative uncharacterised protein K07149 K07149; uncharacterized protein
D HIBPF_12490 conserved hypothetical protein K08998 K08998; uncharacterized protein
D HIBPF_00320 conserved hypothetical protein K09158 K09158; uncharacterized protein
D HIBPF_07150 conserved hypothetical protein K09160 K09160; uncharacterized protein
D HIBPF_14800 conserved hypothetical protein K09780 K09780; uncharacterized protein
D HIBPF_20450 conserved hypothetical protein K09790 K09790; uncharacterized protein
D HIBPF_15550 conserved hypothetical protein K09798 K09798; uncharacterized protein
D HIBPF_19400 conserved hypothetical protein K09801 K09801; uncharacterized protein
D HIBPF_11030 conserved hypothetical protein K09802 K09802; uncharacterized protein
D HIBPF_11540 conserved hypothetical protein K09824 virK; uncharacterized protein
D HIBPF_18680 conserved hypothetical protein K09824 virK; uncharacterized protein
D HIBPF_19950 conserved hypothetical protein K05952 K05952; uncharacterized protein
D HIBPF_12650 conserved hypothetical protein K09861 K09861; uncharacterized protein
D HIBPF_14210 conserved hypothetical protein K09862 K09862; uncharacterized protein
D HIBPF_19010 conserved hypothetical protein K09891 K09891; uncharacterized protein
D HIBPF_15850 conserved hypothetical protein K09894 K09894; uncharacterized protein
D HIBPF_14910 conserved hypothetical protein K09895 K09895; uncharacterized protein
D HIBPF_14630 conserved hypothetical protein K09896 K09896; uncharacterized protein
D HIBPF_14610 conserved hypothetical protein K09897 K09897; uncharacterized protein
D HIBPF_13460 Conserved hypothetical protein K09898 K09898; uncharacterized protein
D HIBPF_10590 conserved hypothetical protein K09899 K09899; uncharacterized protein
D HIBPF_07990 conserved hypothetical protein K09901 K09901; uncharacterized protein
D HIBPF_07950 conserved hypothetical protein K09902 K09902; uncharacterized protein
D HIBPF_14670 conserved hypothetical protein K09904 K09904; uncharacterized protein
D HIBPF_09850 putative uncharacterised protein K09907 K09907; uncharacterized protein
D HIBPF_10290 conserved hypothetical protein K09908 K09908; uncharacterized protein
D HIBPF_05620 conserved hypothetical protein K09909 K09909; uncharacterized protein
D HIBPF_04660 conserved hypothetical protein K09910 K09910; uncharacterized protein
D HIBPF_08270 conserved hypothetical protein K09911 K09911; uncharacterized protein
D HIBPF_07820 conserved hypothetical protein K09917 K09917; uncharacterized protein
D HIBPF_10000 conserved hypothetical protein K09929 K09929; uncharacterized protein
D HIBPF_10010 conserved hypothetical protein K09930 K09930; uncharacterized protein
D HIBPF_03830 conserved hypothetical protein K09960 K09960; uncharacterized protein
D HIBPF_09380 putative uncharacterised protein K09960 K09960; uncharacterized protein
D HIBPF_03870 conserved hypothetical protein K09961 K09961; uncharacterized protein
D HIBPF_09410 conserved hypothetical protein K09961 K09961; uncharacterized protein
D HIBPF_10040 conserved hypothetical protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 23, 2024