+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Neofusicoccum parvum</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        UCRNP2_4847 putative dna-dependent rna polymerase ii largest protein	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        UCRNP2_6242 putative rna polymerase ii second largest subunit protein	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        UCRNP2_8207 putative rna polymerase ii subunit 3 protein	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        UCRNP2_2670 putative dna-directed rna polymerase ii protein	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        UCRNP2_3174 putative polymerase ii polypeptide d protein	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        UCRNP2_6064 putative rna polymerase ii subunit 7 protein	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        UCRNP2_2979 putative dna directed rna polymerase ii 15 kda protein	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        UCRNP2_4246 putative rna polymerase subunit protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        UCRNP2_756 putative dna-directed rna polymerases i protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        UCRNP2_8377 putative dna-directed rna polymerases and iii 145 kda polypeptide protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        UCRNP2_1586 putative metallothionein-i gene transcription activator protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        UCRNP2_5245 putative dna-directed rna polymerases n 8 kda subunit superfamily protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        UCRNP2_5206 putative transcription factor tfiia complex subunit protein	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        UCRNP2_8374 putative transcription initiation factor iia small chain protein	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        UCRNP2_9469 putative transcription initiation factor iia small chain protein	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        UCRNP2_7005 putative transcription initiation factor iib protein	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        UCRNP2_9459 putative tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        UCRNP2_5137 putative transcription factor tfiid complex 145 kda protein	K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] 
E        UCRNP2_1317 putative transcription initiation factor tfiid 127kd subunit protein	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        UCRNP2_6069 putative bromodomain associated domain protein	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        UCRNP2_1897 putative transcription initiation factor tfiid protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        UCRNP2_7528 putative transcription initiation factor tfiid complex 60 kda subunit protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        UCRNP2_6070 putative transcription initiation factor tfiid subunit 7 protein	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        UCRNP2_5975 putative bromodomain associated protein	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        UCRNP2_5394 putative transcription initiation factor 31kd protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        UCRNP2_4092 putative ankyrin-like protein	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        UCRNP2_7291 putative transcription initiation factor tfiid subunit 12 protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        UCRNP2_4984 putative transcription initiation factor tfiid subunit 13 protein	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        UCRNP2_2063 putative transcription initiation factor subunit protein	K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit 
D      TFIIE
E        UCRNP2_1616 putative transcription initiation factor beta protein	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        UCRNP2_2389 putative transcription initiation factor iif subunit protein	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        UCRNP2_4192 putative transcription initiation factor iif protein	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        UCRNP2_1646 putative rna polymerase ii transcription factor protein	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        UCRNP2_1813 putative transcription factor tfiih subunit protein	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        UCRNP2_272 putative tfiih and nucleotide excision repair factor 3 complexes subunit protein	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        UCRNP2_5593 putative tfiih complex helicase protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        UCRNP2_8816 putative tfiih complex helicase protein	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        UCRNP2_3625 putative rna polymerase ii transcription factor b subunit 5 protein	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        UCRNP2_3443 putative serine threonine protein kinase protein	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        UCRNP2_6089 putative cdk-activating kinase assembly factor mat1 protein	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        UCRNP2_6791 putative cyclin protein	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        UCRNP2_7687 putative med6 mediator sub complex protein	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        UCRNP2_9229 putative rna polymerase ii mediator complex component med8 protein	K15130 MED8; mediator of RNA polymerase II transcription subunit 8, fungi type 
E        UCRNP2_274 putative rna polymerase ii mediator complex component protein	K15134 SRB4; mediator of RNA polymerase II transcription subunit 17, fungi type 
E        UCRNP2_9746 putative rna polymerase ii mediator complex subunit protein	K15136 SRB5; mediator of RNA polymerase II transcription subunit 18, fungi type 
D      Middle
E        UCRNP2_695 putative rna polymerase ii mediator complex protein	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        UCRNP2_6193 putative mediator of rna polymerase ii transcription subunit 10 protein	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        UCRNP2_9666 putative mediator of rna polymerase ii transcription subunit 21 protein	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        UCRNP2_285 putative mediator of rna polymerase ii transcription subunit 31 protein	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
D      CDK-module
E        UCRNP2_4533 putative cyclin-dependent protein	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        UCRNP2_3574 putative histone acetyltransferase gcn5 protein	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        UCRNP2_3495 putative histone acetylase complex subunit paf400 protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        UCRNP2_6205 putative saga-like transcriptional regulatory complex subunit protein	K11313 SUPT3H; transcription initiation protein SPT3 
E        UCRNP2_4699 putative saga-like transcriptional regulatory complex subunit protein	K11313 SUPT3H; transcription initiation protein SPT3 
E        UCRNP2_1386 putative transcriptional activator spt7 protein	K11359 SPT7; transcriptional activator SPT7 
E        UCRNP2_4706 putative transcriptional co-activator protein	K11362 HFI1; transcriptional coactivator HFI1/ADA1 
E        UCRNP2_124 putative transcriptional adapter 2 protein	K11314 TADA2A; transcriptional adapter 2-alpha 
E        UCRNP2_9636 putative transcriptional regulator protein	K11315 TADA3; transcriptional adapter 3 
E        UCRNP2_1317 putative transcription initiation factor tfiid 127kd subunit protein	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        UCRNP2_1897 putative transcription initiation factor tfiid protein	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        UCRNP2_7528 putative transcription initiation factor tfiid complex 60 kda subunit protein	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        UCRNP2_6070 putative transcription initiation factor tfiid subunit 7 protein	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        UCRNP2_5394 putative transcription initiation factor 31kd protein	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        UCRNP2_7291 putative transcription initiation factor tfiid subunit 12 protein	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        UCRNP2_9047 putative saga complex component protein	K11364 SGF29; SAGA-associated factor 29 
E        UCRNP2_2971 putative saga complex component protein	K11365 SGF73; SAGA-associated factor 73 
E        UCRNP2_1157 putative chromodomain helicase protein	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        UCRNP2_8240 putative ubiquitin carboxyl-terminal hydrolase protein	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        UCRNP2_1503 putative pre-mrna-splicing factor rse1 protein	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        UCRNP2_3288 putative swi-snf complex subunit protein	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        UCRNP2_800 putative rsc complex subunit protein	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        UCRNP2_9834 putative swi-snf complex subunit protein	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
D      SWI/SNF complex
E        UCRNP2_5084 putative arid bright domain protein	K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1 
E        UCRNP2_5509 putative snf2-family atp dependent chromatin remodeling factor snf21 protein	K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] 
E        UCRNP2_3288 putative swi-snf complex subunit protein	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        UCRNP2_4617 putative chromatin remodeling complex subunit protein	K11768 ARP9; actin-related protein 9 
E        UCRNP2_2063 putative transcription initiation factor subunit protein	K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit 
D      RSC complex
E        UCRNP2_7338 putative rsc complex subunit protein	K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2 
E        UCRNP2_2144 putative nuclear localization protein	K11761 NPL6; chromatin structure-remodeling complex protein RSC7 
E        UCRNP2_9340 putative rsc complex subunit rsc9 protein	K11763 RSC9; chromatin structure-remodeling complex subunit RSC9 
E        UCRNP2_4617 putative chromatin remodeling complex subunit protein	K11768 ARP9; actin-related protein 9 
E        UCRNP2_9467 putative rsc complex subunit protein	K11770 SFH1; chromatin structure-remodeling complex subunit SFH1 
E        UCRNP2_5509 putative snf2-family atp dependent chromatin remodeling factor snf21 protein	K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] 
D      Others
E        UCRNP2_1271 putative rna polymerase ii transcriptional protein	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
C    Other transcription-related factors
D      Transcription elongation factors
E        UCRNP2_4245 putative transcription elongation factor s-ii protein	K03145 TFIIS; transcription elongation factor S-II 
E        UCRNP2_3745 putative transcription elongation factor spt4 protein	K15171 SUPT4H1; transcription elongation factor SPT4 
E        UCRNP2_632 putative transcription initiation protein spt5 protein	K15172 SUPT5H; transcription elongation factor SPT5 
E        UCRNP2_7398 putative transcription elongation factor spt6 protein	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        UCRNP2_10336 putative mrna cleavage factor complex component pcf11 protein	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        UCRNP2_73 putative cleavage and polyadenylation specificity factor subunit protein	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        UCRNP2_3642 putative cleavage and polyadenylation specifity factor protein	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        UCRNP2_8701 putative mrna 3 -end-processing protein yth1 protein	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        UCRNP2_323 putative serine threonine-protein phosphatase pp-z protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        UCRNP2_10285 putative serine threonine-protein phosphatase pp1 protein	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        UCRNP2_3178 putative mrna cleavage and polyadenylation specificity factor complex subunit protein	K06100 SYMPK; symplekin 
E        UCRNP2_4795 putative transcription rna-processing factor ssu72 protein	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        UCRNP2_3228 putative 5 - protein	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        UCRNP2_8459 putative protein rai1 protein	K14845 RAI1; RAT1-interacting protein 
E        UCRNP2_6326 putative duf618 domain protein	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        UCRNP2_3473 putative rna binding protein	K15560 NRD1; protein NRD1 
E        UCRNP2_859 hypothetical protein	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        UCRNP2_2980 putative peptidyl-prolyl cis trans isomerase protein	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        UCRNP2_2401 putative rna polymerase ii- paf1 protein	K15174 PAF1; RNA polymerase II-associated factor 1 
E        UCRNP2_148 putative cdc73 family rna pol ii accessory factor protein	K15175 CDC73; parafibromin 
E        UCRNP2_5545 putative rna polymerase ii transcription elongation factor protein	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        UCRNP2_7199 putative leo1-like protein	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        UCRNP2_1776 putative rna polymerase ii transcription elongation factor protein	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
D      Super elongation complex (SEC)
E        UCRNP2_1100 hypothetical protein	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Little elongation complex (LEC)
E        UCRNP2_1100 hypothetical protein	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
D      BUR kinase complex
E        UCRNP2_8042 putative serine threonine-protein kinase bur1 protein	K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23] 
E        UCRNP2_4599 putative cyclin protein	K15563 BUR2; protein BUR2 
D      CTDK-I complex
E        UCRNP2_6434 putative protein kinase protein	K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] 
E        UCRNP2_9680 putative c-type cyclin protein	K15564 CTK2; CTD kinase subunit beta 
E        UCRNP2_6891 putative ctd kinase subunit gamma protein	K15565 CTK3; CTD kinase subunit gamma 
D      7SK RNP complex
D      DBIRD complex
D      Others
E        UCRNP2_4085 putative tbp associated factor protein	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        UCRNP2_5781 putative cbf nf-y family transcription protein	K21751 DR1; down-regulator of transcription 1 
E        UCRNP2_2968 putative cbf nf-y family transcription factor protein	K21752 DRAP1; Dr1-associated corepressor 
E        UCRNP2_9431 putative rna polymerase ii ctd phosphatase protein	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        UCRNP2_6334 putative serine threonine-protein phosphatase dullard protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        UCRNP2_9660 putative transcriptional elongation factor protein	K17498 SPN1; transcription factor SPN1 
E        UCRNP2_9569 putative duf408 domain protein	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        UCRNP2_8456 putative transcriptional repressor tup1 protein	K06666 TUP1; general transcriptional corepressor TUP1 
E        UCRNP2_1714 putative mads box transcription factor mcm1 protein	K12412 MCM1; pheromone receptor transcription factor 
E        UCRNP2_6494 putative atp binding protein	K24104 GPN; GPN-loop GTPase 
E        UCRNP2_10042 putative atp binding protein	K24104 GPN; GPN-loop GTPase 
E        UCRNP2_7169 putative atpase npa3 protein	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        UCRNP2_4664 putative dna-directed rna polymerase iii polypeptide protein	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        UCRNP2_3659 putative dna-directed rna polymerase i and iii subunit protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        UCRNP2_7612 putative dna-directed rna polymerase i and iii 14 kda polypeptide protein	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        UCRNP2_10416 putative dna directed rna polymerase iii subunit protein	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        UCRNP2_5026 putative dna-directed rna polymerase iii complex subunit rpc37 protein	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        UCRNP2_4771 putative dna-directed rna polymerase iii subunit rpc34 protein	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        UCRNP2_2160 putative dna-directed rna polymerase iii subunit rpc7 protein	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        UCRNP2_5290 putative dna-directed rna polymerase iii polypeptide protein	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        UCRNP2_286 putative rna polymerase iii subunit c11 protein	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        UCRNP2_4246 putative rna polymerase subunit protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        UCRNP2_756 putative dna-directed rna polymerases i protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        UCRNP2_8377 putative dna-directed rna polymerases and iii 145 kda polypeptide protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        UCRNP2_1586 putative metallothionein-i gene transcription activator protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        UCRNP2_5245 putative dna-directed rna polymerases n 8 kda subunit superfamily protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
E        UCRNP2_9459 putative tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        UCRNP2_5792 putative transcription factor tfiiib complex subunit brf1 protein	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
E        UCRNP2_7020 putative rna polymerase iii transcription factor protein	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        UCRNP2_7020 putative rna polymerase iii transcription factor protein	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        UCRNP2_8314 putative phosphoglycerate mutase family protein	K15206 TFC7; transcription factor C subunit 7 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
E        UCRNP2_2821 putative mitogen-activated protein kinase maf1 protein	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        UCRNP2_8818 putative dna-directed rna polymerase i subunit protein	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        UCRNP2_3659 putative dna-directed rna polymerase i and iii subunit protein	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        UCRNP2_7612 putative dna-directed rna polymerase i and iii 14 kda polypeptide protein	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        UCRNP2_6823 putative a49-like rna polymerase i associated factor protein	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        UCRNP2_5202 putative dna-dependent rna polymerase i subunit a43 protein	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        UCRNP2_1877 putative dna-directed rna polymerase i polypeptide protein	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        UCRNP2_4246 putative rna polymerase subunit protein	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        UCRNP2_756 putative dna-directed rna polymerases i protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        UCRNP2_8377 putative dna-directed rna polymerases and iii 145 kda polypeptide protein	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        UCRNP2_1586 putative metallothionein-i gene transcription activator protein	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        UCRNP2_5245 putative dna-directed rna polymerases n 8 kda subunit superfamily protein	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        UCRNP2_9459 putative tata-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        UCRNP2_4210 putative rna polymerase i specific transcription initiation factor rrn3 superfamily protein	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        UCRNP2_5625 putative swib mdm2 domain protein	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        UCRNP2_3745 putative transcription elongation factor spt4 protein	K15171 SUPT4H1; transcription elongation factor SPT4 
E        UCRNP2_632 putative transcription initiation protein spt5 protein	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        UCRNP2_3874 putative chromatin remodelling complex atpase chain isw1 protein	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        UCRNP2_7052 putative iswi chromatin-remodeling complex atpase isw2 protein	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
E        UCRNP2_6434 putative protein kinase protein	K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] 
E        UCRNP2_9680 putative c-type cyclin protein	K15564 CTK2; CTD kinase subunit beta 
E        UCRNP2_6891 putative ctd kinase subunit gamma protein	K15565 CTK3; CTD kinase subunit gamma 
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        UCRNP2_7005 putative transcription initiation factor iib protein	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
D      TFS
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#Last updated: April 9, 2024