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Transfer RNA Biogenesis - Puccinia triticina (wheat leaf rust)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D PtA15_9A146 uncharacterized protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D PtA15_14A126 uncharacterized protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PtA15_12A358 uncharacterized protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PtA15_18A261 uncharacterized protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PtA15_13A107 uncharacterized protein K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D PtA15_9A110 uncharacterized protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PtA15_9A10 uncharacterized protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D PtA15_13A136 uncharacterized protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
D PtA15_1A838 uncharacterized protein K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D PtA15_2A932 uncharacterized protein K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
D PtA15_4A81 uncharacterized protein K15324 TSEN15; tRNA-splicing endonuclease subunit Sen15
D PtA15_5A191 uncharacterized protein K15325 SEN15; tRNA-splicing endonuclease subunit Sen15, fungi type
D PtA15_3A822 uncharacterized protein K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
C Other tRNA splicing factors
D PtA15_2A797 uncharacterized protein K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D PtA15_13A245 uncharacterized protein K14679 TRL1; tRNA ligase [EC:6.5.1.3]
B tRNA transport factors
C tRNA export factors
D PtA15_5A280 uncharacterized protein K07936 RAN; GTP-binding nuclear protein Ran
D PtA15_10A728 uncharacterized protein K14288 XPOT; exportin-T
D PtA15_8A667 uncharacterized protein K14290 XPO1; exportin-1
D PtA15_3A7 uncharacterized protein K03231 EEF1A; elongation factor 1-alpha
D PtA15_7A415 uncharacterized protein K08876 SCYL1; SCY1-like protein 1
D PtA15_10A715 uncharacterized protein K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D PtA15_1A310 uncharacterized protein K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D PtA15_7A816 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_16A340 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_16A346 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_8A767 uncharacterized protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PtA15_17A188 uncharacterized protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PtA15_2A664 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_5A197 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_6A897 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_15A122 uncharacterized protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PtA15_7A518 uncharacterized protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PtA15_18A119 uncharacterized protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PtA15_18A317 uncharacterized protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PtA15_5A187 uncharacterized protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PtA15_1A314 uncharacterized protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PtA15_8A551 uncharacterized protein K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PtA15_16A167 uncharacterized protein K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PtA15_2A516 uncharacterized protein K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
C Other AARSs
D PtA15_12A273 uncharacterized protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PtA15_5A222 uncharacterized protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PtA15_10A720 uncharacterized protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PtA15_11A124 uncharacterized protein K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PtA15_18A142 uncharacterized protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PtA15_10A405 uncharacterized protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PtA15_17A26 uncharacterized protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PtA15_4A878 uncharacterized protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PtA15_8A341 uncharacterized protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PtA15_16A350 uncharacterized protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PtA15_1A177 uncharacterized protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PtA15_10A654 uncharacterized protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PtA15_8A161 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_14A32 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_1A321 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_5A521 uncharacterized protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PtA15_9A210 uncharacterized protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D PtA15_7A498 uncharacterized protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
B tRNA modification factors
C Deaminases
D PtA15_1A411 uncharacterized protein K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
C Dihydorouridine synthases
D PtA15_15A383 uncharacterized protein K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D PtA15_1A142 uncharacterized protein K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D PtA15_11A186 uncharacterized protein K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
C Methylthiotransferase
C Methyltransferases
D PtA15_13A405 uncharacterized protein K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D PtA15_13A425 uncharacterized protein K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D PtA15_8A523 uncharacterized protein K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PtA15_8A474 uncharacterized protein K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D PtA15_9A481 uncharacterized protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PtA15_9A277 uncharacterized protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PtA15_10A677 uncharacterized protein K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D PtA15_11A357 uncharacterized protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PtA15_5A946 uncharacterized protein K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D PtA15_6A563 uncharacterized protein K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D PtA15_10A410 uncharacterized protein K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D PtA15_10A419 uncharacterized protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D PtA15_14A225 uncharacterized protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D PtA15_1A434 uncharacterized protein K17053 ABP140; tRNAThr (cytosine32-N3)-methyltransferase [EC:2.1.1.268]
D PtA15_14A445 uncharacterized protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D PtA15_13A231 uncharacterized protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D PtA15_18A75 uncharacterized protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PtA15_1A18 uncharacterized protein K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D PtA15_17A172 uncharacterized protein K18066 TYW5; tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
C Psudouridine synthases
D PtA15_2A21 uncharacterized protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PtA15_8A269 uncharacterized protein K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D PtA15_5A822 uncharacterized protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PtA15_16A213 uncharacterized protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D PtA15_14A8 uncharacterized protein K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D PtA15_8A47 uncharacterized protein K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D PtA15_15A104 uncharacterized protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PtA15_1A1001 uncharacterized protein K12161 URM1; ubiquitin related modifier 1
D PtA15_3A151 uncharacterized protein K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D PtA15_4A817 uncharacterized protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PtA15_3A177 uncharacterized protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PtA15_17A78 uncharacterized protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PtA15_15A444 uncharacterized protein K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D PtA15_5A345 uncharacterized protein K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D PtA15_8A741 uncharacterized protein K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D PtA15_17A388 uncharacterized protein K11373 ELP1; elongator complex protein 1
D PtA15_18A212 uncharacterized protein K11374 ELP2; elongator complex protein 2
D PtA15_17A53 uncharacterized protein K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D PtA15_3A606 uncharacterized protein K11375 ELP4; elongator complex protein 4
C Elongator related proteins
D PtA15_4A294 uncharacterized protein K15455 DPH3; diphthamide biosynthesis protein 3
D PtA15_11A68 uncharacterized protein K15456 KTI12; protein KTI12
D PtA15_10A510 uncharacterized protein K15462 KTI13; protein ATS1
D PtA15_3A144 uncharacterized protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D PtA15_10A113 uncharacterized protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D PtA15_10A163 uncharacterized protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D PtA15_11A245 uncharacterized protein K15427 SIT4; serine/threonine-protein phosphatase PP1-1 [EC:3.1.3.16]
C Other tRNA modification factors
D PtA15_4A233 uncharacterized protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PtA15_6A822 uncharacterized protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PtA15_1A889 uncharacterized protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PtA15_14A14 uncharacterized protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PtA15_7A812 uncharacterized protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PtA15_11A113 uncharacterized protein K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D PtA15_14A81 uncharacterized protein K06963 TAN1; tRNA acetyltransferase TAN1
D PtA15_11A394 uncharacterized protein K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D PtA15_11A184 uncharacterized protein K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D PtA15_14A68 uncharacterized protein K12597 AIR1_2; protein AIR1/2
D PtA15_13A18 uncharacterized protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D PtA15_6A745 uncharacterized protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D PtA15_9A510 uncharacterized protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D PtA15_15A64 uncharacterized protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D PtA15_7A685 uncharacterized protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D PtA15_9A110 uncharacterized protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PtA15_6A436 uncharacterized protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PtA15_9A10 uncharacterized protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D PtA15_13A136 uncharacterized protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D PtA15_15A122 uncharacterized protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PtA15_8A767 uncharacterized protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PtA15_17A188 uncharacterized protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D PtA15_8A161 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_14A32 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_1A321 uncharacterized protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PtA15_5A521 uncharacterized protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PtA15_9A210 uncharacterized protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PtA15_18A142 uncharacterized protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PtA15_2A664 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_5A197 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_6A897 uncharacterized protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PtA15_1A314 uncharacterized protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PtA15_12A273 uncharacterized protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PtA15_4A878 uncharacterized protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PtA15_7A518 uncharacterized protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PtA15_18A119 uncharacterized protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PtA15_10A405 uncharacterized protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PtA15_17A26 uncharacterized protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PtA15_7A816 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_16A340 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_16A346 uncharacterized protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PtA15_18A317 uncharacterized protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PtA15_5A187 uncharacterized protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PtA15_16A350 uncharacterized protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PtA15_1A177 uncharacterized protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PtA15_10A654 uncharacterized protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PtA15_8A341 uncharacterized protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PtA15_5A222 uncharacterized protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PtA15_10A720 uncharacterized protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D PtA15_7A498 uncharacterized protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
C Methyltransferases
D PtA15_11A357 uncharacterized protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PtA15_14A14 uncharacterized protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
C Psudouridine synthases
D PtA15_2A21 uncharacterized protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PtA15_5A822 uncharacterized protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PtA15_16A213 uncharacterized protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D PtA15_15A104 uncharacterized protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D PtA15_4A817 uncharacterized protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PtA15_3A177 uncharacterized protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PtA15_17A78 uncharacterized protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D PtA15_7A812 uncharacterized protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PtA15_1A889 uncharacterized protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PtA15_4A233 uncharacterized protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PtA15_6A822 uncharacterized protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PtA15_13A70 uncharacterized protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024