+D GENES KO
#
KEGG Orthology (KO) - Rhodospirillum rubrum ATCC 11170
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rru00010]
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Rru_A2947 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rru_A1047 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A3407 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A2409 GlpX K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2403 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2509 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A1345 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A0596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rru_A1889 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A0222 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rru_A0221 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rru_A1234 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rru_A2465 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rru_A2956 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rru_A1881 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rru_A1880 Pyruvate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rru_A1879 Dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rru_A2721 2-oxoglutarate synthase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rru_A2722 2-oxoglutarate synthase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rru_A1503 Zinc-containing alcohol dehydrogenase superfamily K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Rru_A0931 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A3419 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rru00020]
D Rru_A1600 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rru_A3511 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rru_A0356 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rru_A1213 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rru_A1214 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A2721 2-oxoglutarate synthase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rru_A2722 2-oxoglutarate synthase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rru_A1212 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rru_A1211 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rru_A1927 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rru_A1204 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rru_A1205 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rru_A1202 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rru_A1203 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rru_A2206 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rru_A2129 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rru_A1121 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rru_A2317 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rru_A3419 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Rru_A1881 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rru_A1880 Pyruvate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rru_A1879 Dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:rru00030]
D Rru_A2947 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rru_A2402 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rru_A2405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rru_A0595 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rru_A1357 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Rru_A1334 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1359 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1828 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1367 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D Rru_A2303 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Rru_A2297 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A0645 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rru_A0313 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Rru_A2464 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rru_A2509 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A1345 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A0596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rru_A2409 GlpX K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2403 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A1047 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A3407 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rru00040]
D Rru_A2116 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rru_A2117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rru_A2402 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rru_A1267 Carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rru_A0250 Xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Rru_A0252 Zinc-containing alcohol dehydrogenase superfamily K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D Rru_A1346 Pentulose kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:rru00051]
D Rru_A2630 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rru_A0924 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rru_B0046 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rru_B0045 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rru_A0253 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_B0047 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_A0254 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rru_A1047 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A3407 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A2409 GlpX K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2403 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A1971 PfkB K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Rru_A2509 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A1345 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A0596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rru_A1889 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1334 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1359 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1828 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1970 PTS fructose IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Rru_A3447 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rru00052]
D Rru_A3108 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_B0006 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A1486 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A2117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Rru_A1047 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A3407 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A2294 Alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rru00053]
D Rru_A2116 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rru_A3576 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:rru00500]
D Rru_A2294 Alpha amylase, catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Rru_A2117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rru_A3299 Glycoside hydrolase, family 3-like K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rru_A2246 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Rru_A2245 Glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rru_A2576 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rru_A2244 Glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Rru_A1605 Alpha amylase, catalytic region K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Rru_A3302 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D Rru_A1607 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Rru_A1604 Alpha amylase, catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Rru_A0505 Glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rru_A1606 Glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rru_A2577 Glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D Rru_A0507 Alpha amylase, catalytic region K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D Rru_A2295 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Rru_A0506 Glycoside hydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Rru_A2485 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D Rru_A2549 HAD-superfamily hydrolase subfamily IIB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Rru_A2947 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rru_A2630 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rru00520]
D Rru_A1777 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rru_A2630 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Rru_A3029 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rru_A1100 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Rru_A3030 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rru_A2031 Protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Rru_A3437 Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Rru_A3436 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Rru_A2931 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rru_A0948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rru_A2740 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rru_A1493 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rru_A3252 dTDP-glucose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A2117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rru_A2116 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rru_A3108 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_B0006 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A1486 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A3576 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Rru_A3447 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rru_A2947 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rru_A0924 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rru_B0045 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rru_B0046 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rru_A0253 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_B0047 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_A0254 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rru_A2246 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rru00620]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rru_A2721 2-oxoglutarate synthase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rru_A2722 2-oxoglutarate synthase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rru_A1881 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rru_A1880 Pyruvate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rru_A1879 Dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A3000 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A1503 Zinc-containing alcohol dehydrogenase superfamily K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Rru_A2998 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A0920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1379 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1467 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A2997 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A1378 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A2465 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rru_A0218 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rru_A2434 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rru_A2435 Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rru_A3430 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rru_A2654 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rru_A0931 Aldehyde dehydrogenase (NAD+) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D Rru_A1927 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rru_A1124 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Rru_A1299 FAD linked oxidase-like K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Rru_A0442 FAD linked oxidase-like K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Rru_A0777 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Rru_A1410 4Fe-4S ferredoxin K18930 dld; D-lactate dehydrogenase
D Rru_A2466 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Rru_A3270 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rru_A1522 Beta-lactamase-like K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Rru_A2002 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Rru_A3542 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Rru_A1320 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A3673 Glutaconyl-CoA decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A1121 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rru_A2317 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rru_A2206 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Rru_A2129 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Rru_A3419 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Rru_A2956 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1928 Yeast 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rru_A1461 Yeast 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rru_A0695 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rru_A2269 Pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rru00630]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rru_A1600 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Rru_A3511 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0273 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rru_A2964 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rru_A3063 Crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D Rru_A1572 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rru_A3062 methylmalonyl-CoA mutase K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D Rru_A3064 Isovaleryl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D Rru_A1201 MaoC-like dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D Rru_A0217 Citrate lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Rru_A0052 Biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D Rru_A0053 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Rru_A2479 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A2480 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A1356 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rru_A2489 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rru_A3790 Glycolate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Rru_A2002 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Rru_A1956 Haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rru_A1683 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rru_A3031 2-phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rru_A2658 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Rru_A2400 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1827 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A3049 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rru_A3048 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rru_A3051 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A3050 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Rru_A2464 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rru_A0556 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Rru_A1300 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:rru00640]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A1046 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rru_A2998 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A0920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1379 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1467 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A2997 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A1378 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A3000 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Rru_A2962 Zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A0218 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rru_A2434 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rru_A2435 Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rru_A3430 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rru_A1548 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D Rru_A1541 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rru_A0052 Biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D Rru_A0053 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Rru_A1572 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rru_A2479 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A2480 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A1211 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rru_A1212 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rru_A2071 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1542 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A2319 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Rru_A2318 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Rru_A2320 2,3-dimethylmalate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D Rru_A2068 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Rru_A0904 Iron-containing alcohol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D Rru_A0914 Aldehyde dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:rru00650]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3079 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rru_A1309 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1383 Acetate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1472 butyryl-CoA:acetoacetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1382 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1471 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1468 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Rru_A2964 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Rru_A0275 Alpha/beta hydrolase fold K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rru_A1816 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Rru_A3356 Polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Rru_A0273 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Rru_A1320 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A3673 Glutaconyl-CoA decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A0049 Biotin/lipoyl attachment K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Rru_A0050 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Rru_A1204 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rru_A1205 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rru_A1202 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rru_A1203 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rru_A2041 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D Rru_A0134 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0462 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A1927 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Rru_A3000 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Rru_A2398 Pyruvate-ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Rru_A2721 2-oxoglutarate synthase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Rru_A2722 2-oxoglutarate synthase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Rru_A1940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rru_A3695 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rru_A1057 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Rru_A0467 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0284 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0468 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:rru00660]
D Rru_A0467 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0284 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0468 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rru_A2513 Acetyl-CoA hydrolase/transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D Rru_A1211 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Rru_A1212 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Rru_A0217 Citrate lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Rru_A1201 MaoC-like dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D Rru_A1189 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rru_A1190 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rru_A1191 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rru00562]
D Rru_A1687 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rru_A1076 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rru_A2071 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1542 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1889 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rru00190]
D Rru_A1555 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Rru_A1556 NADH dehydrogenase (ubiquinone), 20 kDa subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Rru_A1557 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Rru_A1558 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Rru_A1559 NADH dehydrogenase (ubiquinone) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Rru_A1560 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Rru_A1561 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Rru_A1562 Respiratory-chain NADH dehydrogenase, subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Rru_A1563 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Rru_A1564 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Rru_A1565 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Rru_A1566 NADH-plastoquinone oxidoreductase, chain 5 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Rru_A1567 Proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Rru_A1568 Proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Rru_A1204 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Rru_A1205 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Rru_A1202 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Rru_A1203 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Rru_A0364 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rru_A1192 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rru_A0363 Cytochrome b/b6-like K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rru_A0362 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Rru_A3332 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rru_A3331 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rru_A3330 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rru_A0560 Cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rru_A0561 Cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rru_A1020 Cytochrome c, class I K08738 CYC; cytochrome c
D Rru_A1224 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rru_A1226 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rru_A1225 Sodium-transporting two-sector ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rru_A1223 H+-transporting two-sector ATPase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rru_A1227 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rru_A3246 H+-transporting two-sector ATPase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rru_A3244 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rru_A3243 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rru_A3245 H+-transporting two-sector ATPase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rru_A2263 ATPase, E1-E2 type K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D Rru_A0146 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Rru_A2161 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rru00710]
D Rru_A2400 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Rru_A0221 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rru_A0222 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rru_A2509 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A1345 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A0596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rru_A2409 GlpX K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2403 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rru_A0595 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rru_A1334 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1359 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A1828 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Rru_A2404 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Rru_A1889 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A2402 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Rru_A2956 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Rru_A3542 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rru00680]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A3406 Carboxylesterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Rru_A0324 formate dehydrogenase alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D Rru_A0309 4Fe-4S ferredoxin, iron-sulfur binding K25124 hycB; FeS-containing electron transfer protein
D Rru_A1427 Carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Rru_A1426 4Fe-4S ferredoxin, iron-sulfur binding K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Rru_A1827 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A2464 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rru_A0217 Citrate lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D Rru_A2509 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A1345 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Rru_A0596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Rru_A2409 GlpX K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A2403 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D Rru_A1047 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A3407 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Rru_A1367 hexulose-6-phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D Rru_A1283 Membrane-bound tetrahaem cytochrome TorC/YecK K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D Rru_A1284 Cytoplasmic chaperone TorD K03533 torD; TorA specific chaperone
D Rru_A1287 Trimethylamine-N-oxide reductase (cytochrome c) K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D Rru_A0937 Coenzyme F420 hydrogenase/dehydrogenase beta subunit-like K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D Rru_A2998 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A0920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1379 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1467 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A2997 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A1378 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A1234 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rru_A2456 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rru_A1104 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rru_A0465 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:rru00910]
D Rru_A1011 Nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A1394 nitrogenase iron-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A0773 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A0794 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A0793 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A0772 Oxidoreductase/nitrogenase, component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A1012 Nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A1392 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A0795 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rru_A1010 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Rru_A1395 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Rru_A1393 Nitrogenase K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D Rru_A2759 Hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Rru_A3663 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A0019 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rru_A0018 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rru_A2056 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Rru_A1725 Carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rru00920]
D Rru_A3400 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A2074 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A3401 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rru_A3402 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rru_A3403 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rru_A2290 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rru_A2289 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rru_A0445 3(2),5 -bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rru_A1929 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Rru_A1931 Ferredoxin--nitrite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Rru_A2307 Twin-arginine translocation pathway signal K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Rru_A1615 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rru_A2029 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rru_A0792 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rru_A1616 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rru_A3794 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rru_A3266 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rru_A3214 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Rru_A1316 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Rru_A1658 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D Rru_A0435 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Rru_A1308 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rru00061]
D Rru_A0218 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Rru_A2434 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Rru_A2435 Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Rru_A3430 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Rru_A0044 acyl carrier protein K02078 acpP; acyl carrier protein
D Rru_A0417 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D Rru_A0415 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rru_A1667 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rru_A0418 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rru_A3017 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A0416 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A1596 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rru_A2624 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A3226 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A0744 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Rru_A2191 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1312 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3509 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rru00071]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1309 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rru_A2005 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rru_A2191 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1312 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3509 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rru00561]
D Rru_A2464 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rru_A1503 Zinc-containing alcohol dehydrogenase superfamily K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D Rru_A1340 Glycerone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D Rru_A1361 Glycerone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D Rru_A1360 Dak phosphatase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D Rru_A1341 Dak phosphatase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D Rru_A2009 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rru_A3461 Carbohydrate kinase, FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rru_A1666 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rru_A3192 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rru_A3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rru00564]
D Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Rru_A1508 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Rru_A3192 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rru_A3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Rru_A0202 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Rru_A3786 Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rru_A2643 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Rru_A1032 Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Rru_A1031 Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Rru_A1591 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Rru_A3584 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rru_A3585 Phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Rru_A1869 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Rru_A2165 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Rru_A2221 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D Rru_A0202 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rru00592]
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rru01040]
D Rru_A3650 Lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rru_A2709 Thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rru00230]
D Rru_A1525 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A0645 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Rru_A0404 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rru_A0646 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Rru_A2168 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rru_A0708 Phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Rru_A0710 Phosphoribosylformylglycinamidine synthetase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Rru_A0709 Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rru_A2167 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Rru_A1051 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Rru_A1050 Phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Rru_A0711 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Rru_A1963 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rru_A0716 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rru_A3655 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rru_A0607 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rru_A2483 5'-Nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rru_A1769 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rru_A0643 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rru_A0244 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rru_A2169 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rru_A3640 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Rru_A3319 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Rru_A0299 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A0355 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A3512 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A0429 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Rru_A3258 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1444 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A2441 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1445 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rru_A1276 ATP-cone K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Rru_A1780 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Rru_A0225 Metal dependent phosphohydrolase, HD region K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Rru_A1856 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rru_A0246 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rru_A2160 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Rru_A1071 adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Rru_A1964 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rru_A1106 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rru_A0766 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D Rru_A1085 Metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rru_A2667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rru_A1690 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rru_A3490 Metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Rru_A2290 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rru_A2289 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:rru00240]
D Rru_A2886 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rru_A2885 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rru_A3190 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rru_A2936 Dihydroorotase multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rru_A3191 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Rru_A0514 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Rru_A2507 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Rru_A3424 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Rru_A1588 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Rru_A2169 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rru_A1690 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rru_A3614 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rru_A2768 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Rru_A1887 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Rru_A0294 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Rru_A2483 5'-Nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rru_A1769 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rru_A2255 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Rru_A1085 Metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Rru_A2788 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Rru_A1276 ATP-cone K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Rru_A2794 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Rru_A3258 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1444 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A2441 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1445 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Rru_A0225 Metal dependent phosphohydrolase, HD region K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D Rru_A1703 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Rru_A2791 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rru_A2792 Thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rru00250]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A1433 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rru_A3730 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rru_A2937 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A3028 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0230 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A3121 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1483 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0819 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0855 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1989 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1279 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1460 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A3686 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rru_A3751 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rru_A0397 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rru_A1964 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rru_A1106 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Rru_A1963 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rru_A0716 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Rru_A3190 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Rru_A2041 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D Rru_A0134 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0462 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0019 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rru_A0018 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Rru_A3663 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rru_A0656 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2886 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Rru_A2885 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Rru_A0709 Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rru_A3029 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rru_A0404 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rru00260]
D Rru_A0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rru_A1196 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rru_A2410 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rru_A3053 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Rru_A3233 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rru_A2249 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Rru_A1827 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A2002 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D Rru_A2464 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Rru_A1234 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Rru_A2456 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rru_A1104 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rru_A0465 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Rru_A2508 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A1146 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A3049 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rru_A3048 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rru_A3051 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A3050 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D Rru_A3584 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Rru_A0787 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Rru_A0786 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rru_A2877 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rru_A0647 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rru_A3428 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rru_A3427 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rru_A1979 Tryptophan synthase, beta chain-like K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rru00270]
D Rru_A2029 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rru_A0792 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rru_A1616 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rru_A3794 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Rru_A0786 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rru_A1613 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Rru_A0787 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Rru_A1531 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rru_A1718 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rru_A0917 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rru_A3776 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rru_A1692 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Rru_A1691 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rru_A3396 Autoinducer synthesis protein K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Rru_A0061 Purine and other phosphorylases, family 1 K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Rru_A0361 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Rru_A0643 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Rru_A0360 translation initiation factor 2B subunit I family (IF-2BI) K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Rru_A1998 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K25035 rlp; S-methyl-5-thioribulose 1-phosphate isomerase [EC:5.3.3.23]
D Rru_A2000 conserved hypothetical protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6]
D Rru_A3444 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rru_A0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rru_A1196 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rru_A2410 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rru_A3266 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Rru_A1836 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rru_A2075 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rru_A0774 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rru_A0784 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Rru_A3214 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Rru_A2223 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0300 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0508 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1131 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0570 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rru_A3690 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A1615 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rru_A1210 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Rru_A2456 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rru_A1104 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rru00280]
D Rru_A2223 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0300 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0508 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1131 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1040 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1948 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rru_A0052 Biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D Rru_A0053 Carboxyl transferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Rru_A1572 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Rru_A2479 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A2480 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A1833 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Rru_A2071 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1542 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1541 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D Rru_A1943 Propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Rru_A1942 methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D Rru_A1940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rru_A3695 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rru00290]
D Rru_A2877 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rru_A0647 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Rru_A1189 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Rru_A1190 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Rru_A1191 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Rru_A0467 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0284 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0468 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rru_A0469 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rru_A1786 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rru_A2223 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0300 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0508 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1131 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1040 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Rru_A1928 Yeast 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rru_A1461 Yeast 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Rru_A0695 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rru00300]
D Rru_A2410 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Rru_A0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rru_A1196 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rru_A1865 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rru_A3342 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rru_A0154 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Rru_A3479 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Rru_A0176 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A1147 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A3277 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A0776 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rru_A2084 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rru_A3480 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rru_A1183 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rru_A0396 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rru_A3135 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rru_A0955 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rru_A0954 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rru00310]
D Rru_A0285 Aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D Rru_A1214 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A2005 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0134 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0462 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A2006 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D Rru_A0224 L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Rru_A1383 Acetate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1472 butyryl-CoA:acetoacetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1382 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1471 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1682 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:rru00220]
D Rru_A3276 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Rru_A3751 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rru_A0397 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rru_A1505 Allophanate hydrolase subunit 2 K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Rru_A0709 Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A3663 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A0394 N-acetylglutamate synthase / glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Rru_A3341 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Rru_A2421 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Rru_A0176 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A1147 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A3277 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rru00330]
D Rru_A3729 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D Rru_A2788 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Rru_A1693 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rru_A1691 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rru_A1692 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Rru_A1254 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Rru_A0983 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rru_A1019 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D Rru_A0298 aldehyde dehydrogenase (acceptor) K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D Rru_A3466 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Rru_A3281 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Rru_A0656 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rru_A1239 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rru_A1238 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Rru_A0084 prolyl aminopeptidase. Serine peptidase. MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A1682 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rru00340]
D Rru_A2772 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Rru_A1105 tRNA synthetase, class II (G, H, P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Rru_A3593 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Rru_A1612 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Rru_A3595 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Rru_A3596 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Rru_A3594 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Rru_A3597 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rru_A3165 Histidinol-phosphate phosphatase, putative, inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Rru_A2771 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Rru_A1301 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Rru_A1304 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Rru_A1303 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Rru_A1302 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D Rru_A1300 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:rru00350]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rru_A0134 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0462 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A3697 Fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rru00360]
D Rru_A1976 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rru_A0790 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A3079 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rru_A1546 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D Rru_A1682 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rru_A0983 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:rru00380]
D Rru_A1214 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A2005 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A2719 phenylpyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D Rru_A0983 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rru_A1356 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Rru_A2489 Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rru00400]
D Rru_A0683 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rru_A3741 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Rru_A2433 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Rru_A3613 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rru_A3740 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Rru_A2623 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Rru_A1891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rru_A1895 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rru_A3546 anthranilate synthase, component II K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D Rru_A1896 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Rru_A3425 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Rru_A1897 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Rru_A3428 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Rru_A3427 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rru_A1979 Tryptophan synthase, beta chain-like K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Rru_A3263 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Rru_A3162 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rru00410]
D Rru_A0191 Aspartate 1-decarboxylase-like K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Rru_A3320 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rru_A1541 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1548 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D Rru_A2071 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D Rru_A1542 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rru00430]
D Rru_A2424 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A0385 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A1349 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3318 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3686 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Rru_A3663 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Rru_A2997 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A1378 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Rru_A2998 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A0920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1379 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Rru_A1467 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rru00440]
D Rru_A1037 Amidohydrolase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Rru_A1699 Beta-lactamase-like K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rru00450]
D Rru_A1613 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Rru_A1531 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rru_A1718 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Rru_A0786 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rru_A2570 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Rru_A2898 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rru_A3439 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Rru_A2290 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rru_A2289 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rru_A1701 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rru00460]
D Rru_A3299 Glycoside hydrolase, family 3-like K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Rru_A2424 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A0385 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A1349 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3318 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3730 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Rru_A1827 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rru00470]
D Rru_A0409 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rru_A1682 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rru_A0947 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rru_A0709 Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Rru_A0952 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rru_A2557 Protein of unknown function DUF1611 K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D Rru_A2556 Mandelate racemase/muconate lactonizing enzyme K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D Rru_A1183 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Rru_A0396 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rru_A3135 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Rru_A2065 Proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D Rru_A2066 Dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D Rru_A1546 FAD dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rru00480]
D Rru_A2424 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A0385 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A1349 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3318 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3259 ChaC-like protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D Rru_A2776 ChaC-like protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D Rru_A1504 LamB/YcsF K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Rru_A2462 Enzymatic protein of unknown function K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D Rru_A0570 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Rru_A3690 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Rru_A2173 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A0138 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A0454 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A0022 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A3675 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A3193 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A0682 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Rru_A0356 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Rru_A1863 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Rru_A0020 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Rru_A3057 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D Rru_A1693 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rru_A1691 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Rru_A3723 Glutathionylspermidine amidase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rru00540]
D Rru_A1597 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rru_A0943 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rru_A0043 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rru_A1598 Protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rru_A1599 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rru_A0582 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rru_A0014 KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rru_A1886 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rru_A3163 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rru_A0581 Three-deoxy-D-manno-octulosonic-acid transferase-like K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rru_A2001 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D Rru_A2472 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Rru_A2605 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rru_A0123 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Rru_A3564 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Rru_A3278 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rru00541]
D Rru_A2117 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Rru_A3108 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_B0006 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A1486 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Rru_A2116 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Rru_A3576 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Rru_B0048 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rru_B0050 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_A0935 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rru_B0049 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rru_A2734 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rru_A0924 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Rru_B0046 mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Rru_B0045 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Rru_A0253 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_B0047 NAD-dependent epimerase/dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Rru_A0254 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Rru_A3030 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Rru_A2740 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rru_A1493 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:rru00550]
D Rru_A2931 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rru_A0948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rru_A0949 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rru_A0952 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rru_A0955 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rru_A0947 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rru_A0954 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rru_A1590 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rru_A1803 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A0017 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A0953 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rru_A0950 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rru_A0027 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rru_A2147 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A3393 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A2520 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A0105 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rru_A0473 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rru_A0956 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rru_A0132 Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rru00552]
D Rru_A1803 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A0017 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A1484 Glycosyl transferase WecB/TagA/CpsF K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rru00543]
D Rru_A2029 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Rru_A0792 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rru00730]
D Rru_A2008 Thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Rru_A1102 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Rru_A2027 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1068 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A2619 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rru_A0054 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rru_A2432 ThiS, thiamine-biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Rru_A1080 Thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Rru_A1820 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Rru_A1289 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rru_A2667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rru_A2025 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:rru00740]
D Rru_A3637 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rru_A1823 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rru_A1825 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rru_A2197 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D Rru_A1822 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Rru_A1824 Lumazine-binding protein K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Rru_A2965 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Rru_A3536 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D Rru_A1525 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Rru_A2053 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:rru00750]
D Rru_A2627 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Rru_A1145 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Rru_A1199 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Rru_A1059 Aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Rru_A3551 Aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Rru_A1104 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Rru_A0432 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Rru_A3233 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Rru_A2010 Aminotransferase, class V K18608 ppaT; pyridoxamine---pyruvate transaminase [EC:2.6.1.30]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rru00760]
D Rru_A1433 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Rru_A1434 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Rru_A1432 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Rru_A0684 conserved hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Rru_A2483 5'-Nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Rru_A1769 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Rru_A1237 Cytidylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Rru_A1690 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rru_A0289 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Rru_A0687 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Rru_A1870 CinA-like K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Rru_A3002 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Rru_A3645 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Rru_A0517 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Rru_A2183 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rru_A2182 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Rru_A2181 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Rru_A0134 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Rru_A0462 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rru00770]
D Rru_A0467 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0284 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Rru_A0468 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Rru_A0469 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Rru_A1786 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Rru_A3321 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Rru_A3518 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Rru_A3320 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Rru_A1570 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Rru_A3796 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Rru_A1690 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Rru_A1743 Coenzyme A biosynthesis protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Rru_A3612 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Rru_A2916 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Rru_A2223 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0300 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0508 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1131 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0191 Aspartate 1-decarboxylase-like K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:rru00780]
D Rru_A0418 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rru_A3017 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A0416 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A1596 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rru_A2624 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A3226 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A1569 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rru_A1321 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rru00785]
D Rru_A1996 Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Rru_A1877 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1881 Pyruvate dehydrogenase (lipoamide) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Rru_A1880 Pyruvate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Rru_A1879 Dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Rru_A1213 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Rru_A1214 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Rru_A3049 glycine dehydrogenase (decarboxylating) alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Rru_A3048 glycine dehydrogenase (decarboxylating) beta subunit K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Rru_A3051 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rru_A3050 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rru00790]
D Rru_A1832 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Rru_A0271 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Rru_A1289 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rru_A0455 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D Rru_A2219 Dihydroneopterin aldolase family K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Rru_A1858 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Rru_A1099 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Rru_A3431 Folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Rru_A3637 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rru_A1823 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Rru_A1132 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Rru_A1831 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rru_A3581 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rru_A1959 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rru_A1957 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rru_A0518 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A0325 Molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A1288 Molybdenum cofactor synthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A2813 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rru_A2815 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rru_A0268 Molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Rru_A2222 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Rru_A0971 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Rru_A2812 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rru00670]
D Rru_A0557 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Rru_A1827 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A1142 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Rru_A2168 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Rru_A3655 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rru_A3351 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rru_A3051 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Rru_A1531 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Rru_A2792 Thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Rru_A0556 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Rru_A1530 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Rru_A1084 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rru00860]
D Rru_A2508 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A1146 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A1601 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0688 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0749 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Rru_A1837 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rru_A0141 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rru_A3568 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Rru_A3616 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Rru_A2504 coproporphyrinogen III oxidase, anaerobic K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Rru_A3618 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Rru_A3617 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Rru_A1933 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Rru_A3362 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Rru_A2990 precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Rru_A2989 precorrin-6Y C5,15-methyltransferase (decarboxylating) / precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Rru_A3384 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Rru_A2970 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D Rru_A2988 precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Rru_A2996 Cobalamin (vitamin B12) biosynthesis CbiD protein K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Rru_A2992 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Rru_A2991 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Rru_A3359 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Rru_A3366 hydrogenobyrinic acid a,c-diamide cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Rru_A0206 hydrogenobyrinic acid a,c-diamide cobaltochelatase K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D Rru_A0207 Cobalt chelatase, CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D Rru_A3076 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rru_A3367 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rru_A3381 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rru_A3549 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rru_A3550 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Rru_A3382 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Rru_A2651 aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC
D Rru_A0670 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Rru_A0668 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Rru_A0669 Phosphoglycerate/bisphosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Rru_A0621 hydrogenobyrinic acid a,c-diamide cobaltochelatase K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Rru_A0486 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Rru_A0485 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Rru_A0619 Magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D Rru_A3548 Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D Rru_A0613 Bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D Rru_A0620 Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D Rru_A0623 Light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D Rru_A0622 Light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D Rru_A0627 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Rru_A2980 Chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D Rru_A2979 Chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D Rru_A2978 Chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D Rru_A0624 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D Rru_A2981 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D Rru_A0629 Geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Rru_A3420 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Rru_A2195 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Rru_A3474 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rru00130]
D Rru_A0572 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rru_A0574 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Rru_A2053 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rru_A0742 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Rru_A3707 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Rru_A3798 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Rru_A3498 Ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Rru_A3388 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Rru_A1713 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rru_A3066 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Rru_A0373 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rru00900]
D Rru_A2619 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rru_A0054 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Rru_A1592 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Rru_A1674 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Rru_A0263 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Rru_A0747 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Rru_A0059 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A2053 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rru_A2618 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Rru_A2983 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rru_A2950 Farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rru_A1590 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rru_A0629 Geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:rru00909]
D Rru_A0062 terpene synthase, squalene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rru00906]
D Rru_A0494 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rru_A1759 putative phytoene synthase protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rru_A0493 Phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Rru_A2985 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D Rru_A2984 CrtD protein K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D Rru_A2982 hydroxyneurosporene-O-methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rru00907]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A1306 Short-chain dehydrogenase/reductase SDR K13775 atuG; citronellol/citronellal dehydrogenase
D Rru_A1940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Rru_A2405 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Rru_A0595 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rru00523]
D Rru_B0048 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rru_B0050 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_A0935 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rru_B0049 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rru_A2734 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Rru_A0569 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D Rru_B0050 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_A0935 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rru00946]
D Rru_A3299 Glycoside hydrolase, family 3-like K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rru00311]
D Rru_A1840 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rru_A0228 Twin-arginine translocation pathway signal K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:rru00332]
D Rru_A1239 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Rru_A1238 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rru00261]
D Rru_A2290 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D Rru_A2289 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Rru_A0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Rru_A1196 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Rru_A1865 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rru_A3342 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Rru_A0154 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rru00521]
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Rru_A2115 Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Rru_A1687 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rru_A1076 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Rru_B0048 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rru_B0050 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_A0935 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Rru_B0049 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Rru_A2734 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Rru_A2486 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rru00525]
D Rru_B0048 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Rru_B0050 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Rru_A0935 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rru00401]
D Rru_A3263 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Rru_A1891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rru_A1895 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Rru_A0415 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rru_A3017 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A0416 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A2624 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A3226 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Rru_A0044 acyl carrier protein K02078 acpP; acyl carrier protein
D Rru_A0417 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rru00999]
D Rru_A0917 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rru_A3776 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Rru_A3613 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Rru_A3299 Glycoside hydrolase, family 3-like K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rru00362]
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Rru_A1309 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Rru_A1320 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A3673 Glutaconyl-CoA decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A0049 Biotin/lipoyl attachment K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Rru_A0050 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Rru_A2005 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Rru_A3079 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rru00627]
D Rru_A0983 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Rru_A2654 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Rru_A2053 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Rru_A1383 Acetate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1472 butyryl-CoA:acetoacetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1382 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1471 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:rru00625]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Rru_A1393 Nitrogenase K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D Rru_A0793 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A0772 Oxidoreductase/nitrogenase, component 1 K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A1012 Nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A1392 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Rru_A0795 Nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Rru_A1010 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Rru_A1395 nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Rru_A1011 Nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A1394 nitrogenase iron-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A0773 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Rru_A0794 Nitrogenase K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation [PATH:rru00623]
D Rru_A3112 4-cresol dehydrogenase (hydroxylating) K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:rru00633]
D Rru_A0475 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D Rru_A1162 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Rru_A1161 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Rru_A1427 Carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Rru_A1426 4Fe-4S ferredoxin, iron-sulfur binding K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
D Rru_A1310 Acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rru00643]
D Rru_A0983 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D Rru_A1505 Allophanate hydrolase subunit 2 K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
C 00930 Caprolactam degradation
D Rru_A3801 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rru00626]
D Rru_A0930 Iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D Rru_A3405 Formaldehyde dehydrogenase (glutathione) K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rru03020]
D Rru_A2695 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rru_A2694 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rru_A2664 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rru_A1857 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rru03010]
D Rru_A0293 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rru_A1586 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rru_A2682 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rru_A0701 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rru_A2671 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rru_A0414 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rru_A2692 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rru_A2674 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rru_A2151 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rru_A2689 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rru_A2665 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rru_A2693 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rru_A2666 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rru_A2675 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rru_A3784 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rru_A1185 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rru_A2679 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rru_A0413 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rru_A2684 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rru_A3802 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rru_A1043 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Rru_A2698 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rru_A2685 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rru_A2688 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rru_A2687 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rru_A2676 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rru_A2673 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rru_A2696 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rru_A0411 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rru_A2697 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rru_A2699 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rru_A2152 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rru_A2678 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rru_A2669 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rru_A2681 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rru_A2663 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rru_A2672 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rru_A1188 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rru_A3522 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rru_A1242 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rru_A2683 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rru_A2686 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rru_A2677 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rru_A3746 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rru_A1241 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rru_A0210 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rru_A2680 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rru_A2670 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rru_A1072 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rru_A1665 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rru_A3205 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rru_A3336 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rru_A3521 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rru_A2467 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Rru_AR0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0064 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rru00970]
D Rru_AR0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0062 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rru_AR0056 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rru_AR0035 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rru_AR0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rru_AR0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rru_AR0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rru_AR0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rru_AR0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0039 tRNA-His K14226 tRNA-His; tRNA His
D Rru_AR0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rru_AR0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rru_AR0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0053 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0009 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rru_AR0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0057 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0026 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0069 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0051 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0055 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0048 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rru_AR0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rru_AR0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_AR0058 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_AR0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_A1601 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0688 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A3176 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rru_A3175 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rru_A3177 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rru_A2818 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rru_A2072 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rru_A2954 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rru_A2955 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rru_A3487 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rru_A1770 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rru_A0689 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rru_A1701 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rru_A3351 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Rru_A1796 Valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rru_A3631 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rru_A2966 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rru_A0503 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rru_A1779 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rru_A1576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rru_A0748 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rru_A3523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rru_A3524 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rru_A2032 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rru_A3535 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rru03060]
D Rru_A2668 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rru_A2701 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rru_A1888 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rru_A1764 SecD export membrane protein K03072 secD; preprotein translocase subunit SecD
D Rru_A1763 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rru_A3671 protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D Rru_A1765 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rru_A3339 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rru_A0235 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rru_A3610 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Rru_A1184 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rru_AR0066 ffs; SRP RNA, 4.5S RNA K01983 ffs; SRP RNA
D Rru_A1181 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rru_A1447 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rru_A1773 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Rru_A1772 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Rru_A1771 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Rru_A1853 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rru_A2967 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rru04122]
D Rru_A2027 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1068 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1615 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Rru_A2024 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rru_A2815 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Rru_A0518 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A0325 Molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A1288 Molybdenum cofactor synthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Rru_A2814 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D Rru_A3793 molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Rru_A2813 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Rru_A0268 Molybdopterin binding domain K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rru03018]
D Rru_A1230 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rru_A2149 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rru_A3785 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rru_A1915 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
D Rru_A3203 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rru_A1386 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
D Rru_A0089 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rru_A3619 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rru_A1571 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rru_A3555 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D Rru_A0587 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0162 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A1684 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Rru_A2161 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rru_A0366 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rru03030]
D Rru_A3611 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A0633 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A1582 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rru_A3473 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rru_A1702 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rru_A3629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rru_A2200 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rru_A0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rru_A0410 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rru_A2883 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A3054 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rru_A3209 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rru03410]
D Rru_A0153 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rru_A3251 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rru_A3799 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rru_A3357 Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rru_A1573 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Rru_A1860 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rru_A0266 Phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rru_A1784 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rru_A3696 Exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A2408 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rru03420]
D Rru_A1726 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rru_A1752 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Rru_A1133 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rru_A2220 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rru_A1536 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rru03430]
D Rru_A3541 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rru_A2946 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rru_A1536 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rru_A0159 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rru_A2617 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rru_A2408 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A1582 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rru_A0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rru_A3473 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rru_A3629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rru_A1702 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rru_A3611 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A0633 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A2200 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rru03440]
D Rru_A2408 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A0003 RecF protein K03629 recF; DNA replication and repair protein RecF
D Rru_A1849 Recombination protein O, RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rru_A3471 RecR protein K06187 recR; recombination protein RecR
D Rru_A2819 RecA protein K03553 recA; recombination protein RecA
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A1088 DNA recombination protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rru_A1089 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rru_A1087 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rru_A1728 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rru_A1582 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rru_A0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rru_A3473 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rru_A3629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rru_A1702 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rru_A3611 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A0633 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A2200 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rru_A1222 Primosomal protein n K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rru02010]
D Rru_A3400 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A2074 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A3401 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rru_A3402 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rru_A3403 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rru_A1642 putative sulfonate/nitrate transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Rru_A1643 Binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Rru_A1644 ABC transporter component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D Rru_A0704 Molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rru_A0703 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Rru_A0702 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rru_A3199 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rru_A0769 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rru_A3200 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rru_A0768 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rru_A3201 ABC transporter component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rru_A0767 ABC transporter component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rru_A3015 Twin-arginine translocation pathway signal K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Rru_A3012 Binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D Rru_A3013 Binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D Rru_A3014 ABC transporter component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Rru_A1018 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D Rru_A1015 Binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Rru_A1016 Binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rru_A2476 Binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rru_A2475 Glycine betaine/L-proline transport ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rru_A2385 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rru_A2382 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rru_A2384 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rru_A2383 ABC transporter component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rru_A1260 ABC transporter component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A0095 ABC transporter component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A1528 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Rru_A0056 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Rru_A2438 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2439 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2910 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2447 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A0408 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A2445 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A2908 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A0407 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A2446 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A2909 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A0989 Twin-arginine translocation pathway signal K07335 bmpA; basic membrane protein A and related proteins
D Rru_A2784 Basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rru_A1902 Basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rru_A2786 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rru_A1904 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rru_A2787 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rru_A1903 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rru_A2785 ABC transporter component K23537 nupA; general nucleoside transport system ATP-binding protein
D Rru_A1905 ABC transporter component K23537 nupA; general nucleoside transport system ATP-binding protein
D Rru_A0092 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Rru_A0093 Binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Rru_A0094 Binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Rru_A1365 ribose ABC transporter, periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Rru_A1363 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rru_A1364 ABC transporter component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rru_A0247 Periplasmic binding protein/LacI transcriptional regulator K17205 xltC; putative xylitol transport system substrate-binding protein
D Rru_A0248 inner-membrane translocator K17206 xltB; putative xylitol transport system permease protein
D Rru_A0249 ABC transporter component K17207 xltA; putative xylitol transport system ATP-binding protein
D Rru_A0598 phosphate ABC transporter, periplasmic binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A2035 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A0599 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Rru_A0600 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Rru_A0601 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rru_A2087 extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Rru_A2089 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10002 gltK; glutamate/aspartate transport system permease protein
D Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10003 gltJ; glutamate/aspartate transport system permease protein
D Rru_A2090 ABC transporter component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A1004 Lysine-arginine-ornithine-binding periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0779 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0439 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0780 Binding-protein-dependent transport systems inner membrane component K09970 aapQ; general L-amino acid transport system permease protein
D Rru_A1003 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09970 aapQ; general L-amino acid transport system permease protein
D Rru_A1002 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09971 aapM; general L-amino acid transport system permease protein
D Rru_A0781 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09971 aapM; general L-amino acid transport system permease protein
D Rru_A1001 ABC transporter component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A2251 extracellular solute-binding protein, family 3 K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D Rru_A2252 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D Rru_A2253 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D Rru_A2250 ABC transporter component K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A3303 amide-urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3417 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3506 putative branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3728 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A1746 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A0563 Twin-arginine translocation pathway signal K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2873 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2171 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3306 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3416 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3508 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3726 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A1751 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A0584 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3529 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3307 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3415 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3507 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3727 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1750 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1749 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3304 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3414 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3510 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A0585 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3724 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A1748 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3305 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3413 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3664 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3505 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3725 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A2417 Lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A0778 Lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A0791 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A2418 Binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rru_A0789 Binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rru_A0788 ABC transporter component K02071 metN; D-methionine transport system ATP-binding protein
D Rru_A2419 ABC transporter component K02071 metN; D-methionine transport system ATP-binding protein
D Rru_A0592 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Rru_A0591 Binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rru_A0590 Binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K15583 oppD; oligopeptide transport system ATP-binding protein
D Rru_A0588 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K10823 oppF; oligopeptide transport system ATP-binding protein
D Rru_A2356 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Rru_A2357 Binding-protein-dependent transport systems inner membrane component K12369 dppB; dipeptide transport system permease protein
D Rru_A2358 Binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein
D Rru_A2359 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K12371 dppD; dipeptide transport system ATP-binding protein
D Rru_A2360 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K12372 dppF; dipeptide transport system ATP-binding protein
D Rru_A2277 Nickel ABC transporter, periplasmic nickel-binding K15584 nikA; nickel transport system substrate-binding protein
D Rru_A2276 Binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein
D Rru_A2275 Binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein
D Rru_A2274 ABC transporter component K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Rru_A2273 ABC transporter component K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Rru_A3166 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rru_A3167 Binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Rru_A3168 Binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Rru_A3169 ABC transporter component K13896 yejF; microcin C transport system ATP-binding protein
D Rru_A2390 Twin-arginine translocation pathway signal K09815 znuA; zinc transport system substrate-binding protein
D Rru_A2388 ABC-3 transporter component K09816 znuB; zinc transport system permease protein
D Rru_A2389 ABC transporter component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Rru_A2895 Twin-arginine translocation pathway signal K11604 sitA; manganese/iron transport system substrate-binding protein
D Rru_A2893 ABC-3 transporter component K11605 sitC; manganese/iron transport system permease protein
D Rru_A2892 ABC-3 transporter component K11606 sitD; manganese/iron transport system permease protein
D Rru_A2894 ABC transporter component K11607 sitB; manganese/iron transport system ATP-binding protein
D Rru_A3500 Cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Rru_A2634 Cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Rru_A2633 ABC transporter component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Rru_A3501 lipoprotein, putative K10094 cbiK; nickel transport protein
D Rru_A3499 conserved hypothetical protein K16915 cbiL; nickel transport protein
D Rru_A3386 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rru_A1333 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rru_A1332 Cobalt transport protein K16783 bioN; biotin transport system permease protein
D Rru_A3687 Cobalt transport protein K16783 bioN; biotin transport system permease protein
D Rru_A3688 ABC transporter component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Rru_A1331 ABC transporter component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Rru_B0027 ABC-2 K09690 wzm; homopolymeric O-antigen transport system permease protein
D Rru_B0028 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Rru_A1578 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rru_A2749 Protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rru_A1579 ABC transporter component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rru_A2748 ABC transporter component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rru_A0037 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D
D Rru_A0038 Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D Rru_A0039 Cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Rru_A0040 Heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rru_A2943 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Rru_A3075 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Rru_A0011 ABC transporter component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rru_A3255 Protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rru_A3254 ABC transporter component K09812 ftsE; cell division transport system ATP-binding protein
D Rru_A0189 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A0864 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A2340 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A0188 ABC transporter, transmembrane region K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A0863 ABC transporter, transmembrane region K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A2339 ABC transporter component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A3561 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rru_A2942 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rru_A1120 ABC transporter, transmembrane region K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rru_B0039 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rru_A3236 conserved hypothetical protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Rru_A1497 Cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D Rru_A3300 ABC transporter component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:rru02060]
D Rru_A3445 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rru_A3446 HPrNtr K02784 ptsH; phosphocarrier protein HPr
D Rru_A3447 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rru_A1972 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Rru_A1970 PTS fructose IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Rru_A1971 PfkB K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Rru_A0745 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Rru_A0009 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rru03070]
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A0109 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Rru_A0113 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Rru_A1764 SecD export membrane protein K03072 secD; preprotein translocase subunit SecD
D Rru_A3671 protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D Rru_A1763 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rru_A2701 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rru_A1888 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rru_A2668 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rru_A1765 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rru_A3339 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rru_A0235 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rru_A1181 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rru_A3610 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Rru_A1184 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rru_A1773 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Rru_A1772 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Rru_A1771 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Rru_A3151 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rru02020]
D Rru_A3543 Periplasmic Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rru_A0603 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rru_A1289 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rru_A0598 phosphate ABC transporter, periplasmic binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A2035 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A2226 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rru_A2225 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Rru_A2201 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rru_A2534 Flagellin-like K02406 fliC; flagellin
D Rru_A2858 Flagellin-like K02406 fliC; flagellin
D Rru_A3292 hypothetical protein K02406 fliC; flagellin
D Rru_A1806 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A0541 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A1842 motA, chemotaxis (motility protein A K02556 motA; chemotaxis protein MotA
D Rru_A1158 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rru_A1159 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rru_A1155 Potassium-transporting ATPase K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D Rru_A1156 Potassium-translocating P-type ATPase B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D Rru_A1157 Potassium-transporting ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit
D Rru_A1282 two component transcriptional regulator, winged helix family K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D Rru_A1283 Membrane-bound tetrahaem cytochrome TorC/YecK K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D Rru_A1284 Cytoplasmic chaperone TorD K03533 torD; TorA specific chaperone
D Rru_A0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Rru_A2880 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Rru_A3423 Periplasmic Sensor Signal Transduction Histidine Kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rru_A3422 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Rru_A1200 Citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D Rru_A3539 GlnB (protein PII) uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Rru_A2085 Nitrogen regulatory protein P-II (GlnB, GlnK) K04751 glnB; nitrogen regulatory protein P-II 1
D Rru_A1677 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rru_A1678 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1679 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rru_A1680 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Rru_A0993 transcriptional regulator, NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D Rru_A1388 transcriptional regulator, NifA subfamily, Fis family K02584 nifA; Nif-specific regulatory protein
D Rru_A1384 multi-sensor signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D Rru_A1385 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Rru_A1383 Acetate CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1472 butyryl-CoA:acetoacetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1382 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1471 butyryl-CoA:acetate CoA transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D Rru_A1381 Short chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1436 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Rru_A1435 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Rru_A1437 Sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rru_A0010 Sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
D Rru_A1170 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D Rru_A1161 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Rru_A1162 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Rru_A1163 Nickel-dependent hydrogenase b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Rru_A2325 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A0524 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A1405 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rru_A3513 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A3665 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1712 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1293 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1160 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2484 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2546 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2023 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2076 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2146 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0755 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1401 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1403 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1404 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0632 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1053 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1402 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A1400 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2322 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2562 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2327 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A0522 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2837 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1398 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2326 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2330 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1406 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A0523 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A2323 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A3206 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Rru_A2820 multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rru_A0520 conserved hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D Rru_A0525 two component transcriptional regulator, winged helix family / cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Rru_A2101 two component, sigma54 specific, transcriptional regulator, Fis family K10912 luxO; two-component system, repressor protein LuxO
D Rru_A3678 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Rru_A3677 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Rru_A3676 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rru_A2237 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rru_A2090 ABC transporter component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A2089 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10002 gltK; glutamate/aspartate transport system permease protein
D Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10003 gltJ; glutamate/aspartate transport system permease protein
D Rru_A2087 extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Rru_A2974 Photosynthetic reaction centre M subunit K08929 pufM; photosynthetic reaction center M subunit
D Rru_A2975 Photosynthetic reaction centre protein L subunit K08928 pufL; photosynthetic reaction center L subunit
D Rru_A2976 Antenna complex, alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D Rru_A2977 Antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D Rru_A0617 Photosynthetic reaction center, H-chain K13991 puhA; photosynthetic reaction center H subunit
D Rru_A0364 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rru_A1192 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rru_A0363 Cytochrome b/b6-like K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rru_A0362 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Rru_A1020 Cytochrome c, class I K08738 CYC; cytochrome c
D Rru_A3332 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Rru_A3331 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Rru_A3330 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Rru_A0560 Cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Rru_A0561 Cytochrome bd ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A3117 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rru_A1487 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rru_A3646 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Rru_A2740 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rru_A1493 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Rru_A1439 Putative FecR K07165 fecR; transmembrane sensor
D Rru_A0884 Putative FecR K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rru04148]
D Rru_A1693 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Rru_A0364 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Rru_A1192 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rru02024]
D Rru_A2101 two component, sigma54 specific, transcriptional regulator, Fis family K10912 luxO; two-component system, repressor protein LuxO
D Rru_A1684 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Rru_A1891 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Rru_A1895 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Rru_A0683 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Rru_A1159 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rru_A3396 Autoinducer synthesis protein K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Rru_A3395 transcriptional regulator, LuxR family K19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
D Rru_A0808 type II secretion system protein E K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Rru_A0807 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Rru_A0806 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD
D Rru_A0805 conjugal transfer protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Rru_A0500 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rru_A2047 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rru_A0498 Binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rru_A2045 Binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rru_A0499 Binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Rru_A2046 Binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Rru_A0497 ABC transporter component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rru_A2048 ABC transporter component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rru_A3303 amide-urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3417 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3506 putative branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3728 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A1746 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A0563 Twin-arginine translocation pathway signal K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2873 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2171 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3306 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3416 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3508 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3726 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A1751 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A0584 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3529 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3307 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3415 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3507 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3727 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1750 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1749 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3304 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3414 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3510 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A0585 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3724 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A1748 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3305 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3413 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3664 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3505 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3725 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A2191 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1312 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3509 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1911 Ferric uptake regulator (FUR) family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Rru_A3637 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Rru_A1825 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Rru_A0592 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Rru_A0591 Binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rru_A0590 Binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K15583 oppD; oligopeptide transport system ATP-binding protein
D Rru_A0588 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K10823 oppF; oligopeptide transport system ATP-binding protein
D Rru_A2474 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A1917 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A2014 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A0799 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A0979 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A2178 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A1918 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A2013 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A0800 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A0980 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A2176 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A1919 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A2012 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0801 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0981 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A2177 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0982 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A0802 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A1920 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A2011 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A2175 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A0803 ABC transporter component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A1921 ABC transporter component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A2174 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A3339 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rru_A3671 protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D Rru_A2701 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rru_A1888 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rru_A2668 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rru_A1765 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rru_A0235 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rru_A1181 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rru_A3610 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Rru_A1184 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rru02030]
D Rru_A3513 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A3665 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1712 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1293 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1160 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2484 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2546 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2023 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2076 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2146 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0755 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1401 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1403 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1404 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0632 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1053 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1365 ribose ABC transporter, periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Rru_A2356 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2327 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1402 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A1400 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2322 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2562 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A0522 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2837 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1398 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2326 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2330 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1406 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A0523 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A2323 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rru_A1407 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Rru_A2325 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A0524 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A1405 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A0544 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rru_A2840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rru_A0542 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A3170 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A1806 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A0541 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A1842 motA, chemotaxis (motility protein A K02556 motA; chemotaxis protein MotA
D Rru_A1843 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1073 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1807 OmpA/MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rru02040]
D Rru_A2824 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rru_A0545 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF
D Rru_A0544 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rru_A0543 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rru_A0526 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rru_A0527 conserved hypothetical protein K02413 fliJ; flagellar protein FliJ
D Rru_A0548 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Rru_A2841 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rru_A1819 hypothetical protein K02415 fliL; flagellar protein FliL
D Rru_A2840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rru_A0542 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A3170 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A2829 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Rru_A2830 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rru_A2823 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rru_A2822 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rru_A0539 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rru_A2821 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rru_A2844 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rru_A2826 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Rru_A2825 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rru_A0547 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rru_A2533 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rru_A0546 conserved hypothetical protein K02390 flgE; flagellar hook protein FlgE
D Rru_A2532 conserved hypothetical protein K02390 flgE; flagellar hook protein FlgE
D Rru_A2431 Protein of unknown function DUF1078 K02390 flgE; flagellar hook protein FlgE
D Rru_A2842 conserved hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rru_A2843 conserved hypothetical protein K02392 flgG; flagellar basal-body rod protein FlgG
D Rru_A2845 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rru_A2849 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rru_A2850 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rru_A2852 conserved hypothetical protein K02396 flgK; flagellar hook-associated protein 1
D Rru_A2528 putative flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rru_A2853 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rru_A2534 Flagellin-like K02406 fliC; flagellin
D Rru_A2858 Flagellin-like K02406 fliC; flagellin
D Rru_A3292 hypothetical protein K02406 fliC; flagellin
D Rru_A2535 Flagellar hook-associated protein 2 (FliD, filament cap protein) K02407 fliD; flagellar hook-associated protein 2
D Rru_A2536 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D Rru_A1806 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A0541 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A1842 motA, chemotaxis (motility protein A K02556 motA; chemotaxis protein MotA
D Rru_A1843 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1073 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1807 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A2882 Sigma 70 (RpoD) K03086 rpoD; RNA polymerase primary sigma factor
D Rru_A0010 Sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rru04980]
D Rru_A3076 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Rru_A2478 ArgK protein K07588 MMAA; GTPase [EC:3.6.5.-]
D Rru_A2944 ArgK protein K07588 MMAA; GTPase [EC:3.6.5.-]
D Rru_A2479 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A2480 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Rru_A1531 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rru01501]
D Rru_A2211 Porin, Gram-negative type K08720 ompU; outer membrane protein OmpU
D Rru_A0147 Major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rru_A1777 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Rru_A0592 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Rru_A0591 Binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rru_A0590 Binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K15583 oppD; oligopeptide transport system ATP-binding protein
D Rru_A0588 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K10823 oppF; oligopeptide transport system ATP-binding protein
D Rru_A0228 Twin-arginine translocation pathway signal K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rru_A1117 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2050 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3700 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2094 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A3699 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Rru_A2930 Periplasmic Sensor Signal Transduction Histidine Kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rru_A2929 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A2147 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A3393 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A2520 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A0473 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rru_A0956 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rru01502]
D Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Rru_A0947 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rru_A0409 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rru_A0954 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Rru_A0953 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rru_A0950 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rru01503]
D Rru_A2148 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rru_A2201 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rru_A1117 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2050 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3700 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2094 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A3699 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A1597 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rru_A2880 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rru01000]
C 01001 Protein kinases [BR:rru01001]
D Rru_A3151 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D Rru_A1246 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A2443 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A1974 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A1490 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rru_A3119 ATPases involved in chromosome partitioning-like K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Rru_A3543 Periplasmic Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rru_A2226 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rru_A1158 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rru_A3423 Periplasmic Sensor Signal Transduction Histidine Kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rru_A2930 Periplasmic Sensor Signal Transduction Histidine Kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rru_A1677 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rru_A1679 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rru_A1384 multi-sensor signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D Rru_A1436 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2327 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2820 multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rru01009]
D Rru_A3444 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rru_A0465 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rru01002]
D Rru_A2967 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Rru_A0108 Peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Rru_A1164 HyaD peptidase. Aspartic peptidase. MEROPS family A31 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Rru_A0322 Peptidase M52, hydrogen uptake protein K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Rru_A0299 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A0355 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A3512 Glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Rru_A0651 Glutamine amidotransferase class-I K07010 K07010; putative glutamine amidotransferase
D Rru_A0404 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Rru_A0019 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Rru_A3029 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Rru_A2937 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A3028 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0230 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A3121 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1483 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0819 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0855 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1989 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1279 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A1460 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Rru_A0902 Peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D Rru_A1936 ErfK/YbiS/YcfS/YnhG K21470 ycbB; L,D-transpeptidase YcbB
D Rru_A2192 Peptidase M3B, oligoendopeptidase-related clade 3 K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Rru_A2972 Peptidase M16-like K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rru_A2973 Peptidase M16-like K07263 pqqL; zinc protease [EC:3.4.24.-]
D Rru_A2173 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A0138 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A0454 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Rru_A3480 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Rru_A0733 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Rru_A2865 Peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Rru_A3232 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Rru_A1098 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rru_A3579 HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Rru_A1593 RseP peptidase. Metallo peptidase. MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Rru_A2201 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rru_A0132 Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rru_A1550 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Rru_A1552 Lon-A peptidase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Rru_A1898 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rru_A1853 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Rru_A0084 prolyl aminopeptidase. Serine peptidase. MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Rru_A1232 C-terminal processing peptidase S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rru_A3204 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Rru_A1840 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Rru_A2621 Peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Rru_A3565 Rhomboid-like protein K07059 K07059; rhomboid family protein
D Rru_A3599 20S proteasome, A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Rru_A2424 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A0385 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A1349 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A3318 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Rru_A2524 Peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D Rru_A2525 Peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Rru_A0575 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 K03592 pmbA; PmbA protein
D Rru_A0567 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 K03568 tldD; TldD protein
D Rru_A0104 Alpha-2-macroglobulin-like protein K06894 yfhM; alpha-2-macroglobulin
D Rru_A2202 HflC K04087 hflC; modulator of FtsH protease HflC
D Rru_A2203 HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rru01003]
D Rru_A2245 Glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Rru_A0027 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rru_A0105 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rru_A2147 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A3393 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A2520 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A1484 Glycosyl transferase WecB/TagA/CpsF K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Rru_A2133 glycosyl transferase, group 2 family protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Rru_A2485 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rru01005]
D Rru_A1597 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Rru_A1599 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Rru_A0943 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Rru_A0043 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Rru_A3073 Phosphoesterase, PA-phosphatase related K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D Rru_A1598 Protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Rru_A0582 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Rru_A2001 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D Rru_A0581 Three-deoxy-D-manno-octulosonic-acid transferase-like K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Rru_A2472 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Rru_A1886 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Rru_A3163 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Rru_A0014 KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Rru_A2605 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Rru_A3564 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Rru_A0123 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D Rru_A3278 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rru01011]
D Rru_A2931 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Rru_A0948 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Rru_A0949 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Rru_A0952 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Rru_A0955 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Rru_A0947 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Rru_A0409 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Rru_A0953 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Rru_A0950 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Rru_A1803 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A0017 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Rru_A3538 Virulence factor MVIN-like K03980 murJ; putative peptidoglycan lipid II flippase
D Rru_A2147 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A3393 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A2520 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Rru_A0105 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Rru_A0473 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Rru_A0956 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Rru_A0132 Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Rru_A0027 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Rru_A1936 ErfK/YbiS/YcfS/YnhG K21470 ycbB; L,D-transpeptidase YcbB
D Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Rru_A1866 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rru_A3607 murein degrading transglycosylase protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Rru_A1706 Lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Rru_A0419 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Rru_A1705 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rru_A1025 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Rru_A2148 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rru01004]
D Rru_A0415 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Rru_A1667 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Rru_A0418 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Rru_A3017 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A0416 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Rru_A1596 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Rru_A2624 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A3226 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Rru_A0744 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Rru_A3650 Lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Rru_A2709 Thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D Rru_A3575 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Rru_A1046 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Rru_A3695 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Rru_A2191 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1312 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3509 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1666 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Rru_A3192 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Rru_A3257 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rru01006]
D Rru_A2618 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Rru_A2983 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Rru_A2950 Farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Rru_A1590 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Rru_A0494 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rru_A1759 putative phytoene synthase protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Rru_A0466 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rru_A3388 1,4-Dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Rru_A0572 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Rru_A0627 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rru01007]
D Rru_A0503 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rru_A1601 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0688 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A3734 Glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Rru_A2032 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rru_A3535 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rru_A0689 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rru_A1779 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rru_A1701 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rru_A2966 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rru_A1796 Valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rru_A3631 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rru_A2072 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rru_A0748 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rru_A2954 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rru_A2955 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rru_A1770 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rru_A1576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rru_A3487 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rru_A2818 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rru_A3523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rru_A3524 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rru_A1135 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Rru_A2411 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Rru_A0776 succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rru_A2084 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Rru_A3264 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Rru_A2508 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A1146 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D Rru_A1541 aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D Rru_A3466 aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D Rru_A0176 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A1147 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A3277 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Rru_A1254 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D Rru_A1682 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Rru_A2223 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0300 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A0508 Aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1131 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Rru_A1104 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rru00194]
D Rru_A1227 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Rru_A1226 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Rru_A1225 Sodium-transporting two-sector ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Rru_A1224 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Rru_A1223 H+-transporting two-sector ATPase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Rru_A3244 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rru_A3243 H+-transporting two-sector ATPase, B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Rru_A3245 H+-transporting two-sector ATPase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Rru_A3246 H+-transporting two-sector ATPase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rru_A3247 hypothetical protein K02116 atpI; ATP synthase protein I
D Rru_A2975 Photosynthetic reaction centre protein L subunit K08928 pufL; photosynthetic reaction center L subunit
D Rru_A2974 Photosynthetic reaction centre M subunit K08929 pufM; photosynthetic reaction center M subunit
D Rru_A0617 Photosynthetic reaction center, H-chain K13991 puhA; photosynthetic reaction center H subunit
D Rru_A2976 Antenna complex, alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain
D Rru_A2977 Antenna complex, alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rru03000]
D Rru_A0862 transcriptional regulator, AraC family K05372 ybtA; AraC family transcriptional regulator
D Rru_A0841 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Rru_A0536 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D Rru_A3357 Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rru_A3368 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rru_A2214 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rru_A2215 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rru_A0785 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D Rru_A2782 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Rru_A0334 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Rru_A0658 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Rru_A1540 transcriptional regulator, LysR family K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D Rru_A2401 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Rru_A2304 transcriptional regulator, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D Rru_A1973 transcriptional regulator, LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D Rru_A1294 transcriptional regulator, histidine utilization repressor, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D Rru_A1414 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Rru_A1143 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rru_A1925 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Rru_A2863 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D Rru_A0888 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Rru_A1794 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D Rru_A2906 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rru_A0655 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rru_A3395 transcriptional regulator, LuxR family K19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
D Rru_A0021 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Rru_A3767 Ferric uptake regulator (FUR) family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Rru_A1911 Ferric uptake regulator (FUR) family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Rru_A3788 Ferric uptake regulator (FUR) family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Rru_A3322 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Rru_A1245 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Rru_A1431 transcriptional regulator, Crp/Fnr family K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D Rru_A2028 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Rru_A1450 transcriptional regulator, ArsR family K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Rru_A2316 transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D Rru_A1569 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rru_A1321 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Rru_A2442 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Rru_A2482 transcription regulator containing helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Rru_A0932 Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Rru_A0993 transcriptional regulator, NifA, Fis family K02584 nifA; Nif-specific regulatory protein
D Rru_A1388 transcriptional regulator, NifA subfamily, Fis family K02584 nifA; Nif-specific regulatory protein
D Rru_A1950 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Rru_A0921 DNA-binding protein K07726 K07726; putative transcriptional regulator
D Rru_A0304 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Rru_A3065 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Rru_A0656 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D Rru_A3195 Helix-turn-helix protein, CopG K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Rru_A3515 transcriptional regulator, LytR/AlgR family K21696 rcoM; LytTR family transcriptional regulator, CO-responsive transcriptional regulator RcoM
D Rru_A0204 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Rru_A3628 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rru_A0079 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Rru_A3642 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Rru_A2025 transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Rru_A1623 Amino acid-binding ACT K03567 gcvR; glycine cleavage system transcriptional repressor
D Rru_A1219 Sigma54 Specific Transcriptional Regulator containing PAS, and Fis DNA-binding domains K03974 pspF; psp operon transcriptional activator
D Rru_A0942 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Rru_A0353 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Rru_A3059 Protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Rru_A2847 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rru_A1826 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR
D Rru_A0959 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rru03021]
D Rru_A2664 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rru_A2695 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rru_A2694 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rru_A1857 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rru_A2882 Sigma 70 (RpoD) K03086 rpoD; RNA polymerase primary sigma factor
D Rru_A3287 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rru_A0722 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rru_A2397 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rru_A2537 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Rru_A1110 Sigma 32 (RpoH) K03089 rpoH; RNA polymerase sigma-32 factor
D Rru_A1021 Sigma 32 (RpoH) K03089 rpoH; RNA polymerase sigma-32 factor
D Rru_A0010 Sigma-54 (RpoN) K03092 rpoN; RNA polymerase sigma-54 factor
D Rru_A3779 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rru_A1821 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rru_A2700 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rru_A0099 serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Rru_A2907 Anti-Sigma-factor antagonist (STAS) domain protein K04749 rsbV; anti-sigma B factor antagonist
D Rru_A2847 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rru_A2887 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Rru_A3619 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rru03019]
D Rru_A2149 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rru_A2767 ribonuclease G (RNase G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D Rru_A1852 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rru_A1571 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Rru_A3203 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rru_A1915 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
D Rru_A1386 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
D Rru_A0089 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rru_A3785 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Rru_A3619 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Rru_A3555 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D Rru_A0587 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0162 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A1684 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Rru_A2161 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Rru_A0366 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Rru_A1230 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Rru_A3448 Uncharacterized P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:rru03011]
D Rru_A0293 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Rru_A1586 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Rru_A2682 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Rru_A0701 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Rru_A2671 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Rru_A0414 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Rru_A2692 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Rru_A2674 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Rru_A2151 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Rru_A2689 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Rru_A2665 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Rru_A2693 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Rru_A2666 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Rru_A2675 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Rru_A3784 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Rru_A1185 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Rru_A2679 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Rru_A0413 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Rru_A2684 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Rru_A3802 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Rru_A1043 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Rru_A2698 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Rru_A2685 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Rru_A2688 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Rru_A2687 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Rru_A2676 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Rru_A2673 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Rru_A0411 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Rru_A2697 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Rru_A2699 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Rru_A2696 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Rru_A2152 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Rru_A2678 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Rru_A2669 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Rru_A2681 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Rru_A2663 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Rru_A2672 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Rru_A1188 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Rru_A3522 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Rru_A1242 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Rru_A2683 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Rru_A2686 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Rru_A2677 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Rru_A1241 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Rru_A0210 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Rru_A2680 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Rru_A2670 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Rru_A1072 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Rru_A1665 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Rru_A3205 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Rru_A3336 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Rru_A3521 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Rru_A2467 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Rru_A3746 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Rru_AR0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0064 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rru03009]
D Rru_A1852 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rru_A1851 GTP-binding protein Era K03595 era; GTPase
D Rru_A1240 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D Rru_A2847 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Rru_A3779 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Rru_A1821 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Rru_A2700 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Rru_A0431 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Rru_A3660 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rru_A0243 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Rru_A0653 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Rru_A0571 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Rru_A3626 Glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rru_A0958 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Rru_A3693 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Rru_A2620 Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Rru_A2703 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Rru_A0245 Ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Rru_A1235 Protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Rru_A3333 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Rru_A1938 Protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Rru_A3329 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Rru_A0652 Pseudouridine synthase, Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Rru_A2659 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Rru_A1111 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Rru_A1939 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Rru_A3764 GCN5-related N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Rru_A1186 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Rru_A2811 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Rru_A2866 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Rru_A2149 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Rru_A2767 ribonuclease G (RNase G) K08301 rng; ribonuclease G [EC:3.1.26.-]
D Rru_A3178 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Rru_A1386 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
D Rru_A3084 Small GTP-binding protein domain K03977 engA; GTPase
D Rru_A1685 Small GTP-binding protein domain K03665 hflX; GTPase
D Rru_A0444 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rru_A1856 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Rru_A3782 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Rru_A3778 Protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Rru_A1236 Iojap-related protein K09710 ybeB; ribosome-associated protein
D Rru_A3772 Protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Rru_A3748 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rru03016]
D Rru_A3450 Ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D Rru_A1601 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0688 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A1576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Rru_A2966 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Rru_A3631 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rru_A1701 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Rru_A1779 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rru_A2072 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rru_A2818 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Rru_A3487 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Rru_A1770 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Rru_A0689 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Rru_A1796 Valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Rru_A0748 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Rru_A3523 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Rru_A3524 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Rru_A2032 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rru_A3535 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Rru_A3592 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rru_A3777 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Rru_A3352 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Rru_A3783 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Rru_A2027 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1068 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A0444 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Rru_A0466 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Rru_A3624 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Rru_A3625 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rru_A0445 3(2),5 -bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Rru_A3337 ribonuclease P protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Rru_AR0024 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D Rru_A3641 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Rru_A0015 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Rru_A2073 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Rru_A3649 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Rru_A1527 ABC transporter component K06020 ettA; energy-dependent translational throttle protein EttA
D Rru_A0503 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Rru_A2954 Glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Rru_A2955 Glycine--tRNA ligase K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Rru_A3734 Glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Rru_A3668 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Rru_A1123 Ala-tRNA(Pro) hydrolase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Rru_A0650 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Rru_A3770 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Rru_A1182 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Rru_A3652 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Rru_A0696 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Rru_A1757 Gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rru_A1187 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Rru_A0365 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Rru_A2024 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Rru_A2568 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein
D Rru_A2271 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein
D Rru_A2940 Glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Rru_A0281 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Rru_A1957 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Rru_A1831 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Rru_A1959 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Rru_A0280 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Rru_A1097 PP-loop protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Rru_A3763 Peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Rru_A3569 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Rru_A3438 Protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Rru_A3203 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Rru_A3785 3' exoribonuclease K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rru03012]
D Rru_A3781 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rru_A3488 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rru_A2170 ABC transporter component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Rru_A1587 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rru_A2690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A2702 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A1140 Elongation factor G K02355 fusA; elongation factor G
D Rru_A2691 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rru_A0750 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Rru_A1589 ribosome recycling factor K02838 frr; ribosome recycling factor
D Rru_A0751 Modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Rru_A3747 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Rru_A0662 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Rru_A1077 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Rru_A1078 tRNA synthetase, class II (D, K and N) K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Rru_A2040 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D Rru_A2497 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
D Rru_A0097 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rru03110]
D Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Rru_A0753 Chaperone clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Rru_A1551 ClpX, ATPase regulatory subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Rru_A3600 Heat shock protein HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rru_A3555 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D Rru_A3761 conserved hypothetical protein K04046 yegD; hypothetical chaperone protein
D Rru_A0587 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0162 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A3554 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rru_A0961 conserved hypothetical protein K05801 djlA; DnaJ like chaperone protein
D Rru_A3275 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Rru_A3643 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rru_A1070 Heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D Rru_A0075 RNA-binding S4 K04762 hslR; ribosome-associated heat shock protein Hsp15
D Rru_A0586 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rru_A0161 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rru_A2201 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Rru_A1098 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Rru_A3246 H+-transporting two-sector ATPase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Rru_A3610 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Rru_A3421 Protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Rru_A1168 Hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Rru_A0928 Hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Rru_A0302 Hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Rru_A1169 Hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Rru_A1284 Cytoplasmic chaperone TorD K03533 torD; TorA specific chaperone
D Rru_A0395 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Rru_A0433 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Rru_A3433 Thioredoxin K03671 TXN; thioredoxin
D Rru_A3711 Thioredoxin-related K05838 ybbN; putative thioredoxin
D Rru_A0738 Glutaredoxin, GrxC K03676 grxC; glutaredoxin 3
D Rru_A0705 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Rru_A0034 Periplasmic protein thiol-disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rru04131]
D Rru_A0202 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Rru_A2169 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Rru_A1447 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rru_A0222 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rru_A2465 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rru_A3661 Major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rru04121]
C 03051 Proteasome [BR:rru03051]
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rru03032]
D Rru_A3054 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Rru_A1553 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rru_A1668 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rru_A0292 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rru_A0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Rru_A0410 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Rru_A2883 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A1582 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rru_A0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rru_A2200 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rru_A3629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rru_A1702 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rru_A3611 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A0633 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A3473 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rru_A3209 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rru_A1744 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rru_A0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rru_A1848 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rru_A2710 Gram negative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rru_A3202 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rru03036]
D Rru_A1852 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Rru_A1553 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rru_A1668 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rru_A0292 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rru_A2016 conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D Rru_A0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Rru_A2364 Hemimethylated DNA-binding region K11940 hspQ; heat shock protein HspQ
D Rru_A0333 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Rru_A1499 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Rru_A1684 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Rru_A0658 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D Rru_A2906 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rru_A0655 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Rru_A3248 condensin subunit Smc K03529 smc; chromosome segregation protein
D Rru_A1775 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D Rru_A1774 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D Rru_A0945 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rru_A3254 ABC transporter component K09812 ftsE; cell division transport system ATP-binding protein
D Rru_A0956 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Rru_A3705 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rru_A2096 Cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Rru_A0957 secreted (periplasmic) protein-like K03586 ftsL; cell division protein FtsL
D Rru_A0946 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Rru_A0951 Cell cycle protein K03588 ftsW; cell division protein FtsW
D Rru_A3255 Protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rru_A0944 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rru_A1083 Protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Rru_A1208 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D Rru_A2148 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rru_A1117 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2050 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3700 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A0470 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rru_A0471 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Rru_A0472 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Rru_A3679 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Rru_A3627 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Rru_A2118 ATPase K03496 parA; chromosome partitioning protein
D Rru_B0001 putative partition protein K03496 parA; chromosome partitioning protein
D Rru_A1526 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Rru_A3136 putative partition-related protein K03496 parA; chromosome partitioning protein
D Rru_A3628 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Rru_A1848 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rru_A2710 Gram negative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rru_A3625 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Rru_A3626 Glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Rru_A1757 Gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Rru_A1220 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC
D Rru_A3738 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D Rru_A2204 Protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rru_A3340 GTP-binding K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rru03400]
D Rru_A3358 Methylated-DNA--(protein)-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Rru_A3621 Methylated-DNA-(protein)-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Rru_A2903 Deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Rru_A3251 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Rru_A0153 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Rru_A0393 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Rru_A2791 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Rru_A1860 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rru_A0266 Phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Rru_A3357 Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Rru_A1573 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Rru_A3799 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Rru_A1784 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rru_A3696 Exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Rru_A2408 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Rru_A0939 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Rru_A3514 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Rru_A1752 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Rru_A1133 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Rru_A2220 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Rru_A1536 ATP-dependent DNA helicase, Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Rru_A2695 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Rru_A2694 DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Rru_A2664 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Rru_A1857 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Rru_A1726 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Rru_A3541 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Rru_A2946 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Rru_A0159 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Rru_A2617 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Rru_A1582 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Rru_A0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Rru_A2200 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Rru_A3629 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Rru_A1702 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Rru_A3611 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A0633 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Rru_A3473 DNA-directed DNA polymerase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A2819 RecA protein K03553 recA; recombination protein RecA
D Rru_A1088 DNA recombination protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Rru_A1089 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Rru_A1087 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Rru_A1222 Primosomal protein n K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Rru_A0406 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Rru_A0003 RecF protein K03629 recF; DNA replication and repair protein RecF
D Rru_A1728 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Rru_A1849 Recombination protein O, RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Rru_A3471 RecR protein K06187 recR; recombination protein RecR
D Rru_A0940 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Rru_A3434 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Rru_A3435 conserved hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Rru_A0833 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0169 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0347 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0179 CRISPR-associated protein, Cas1 family / CRISPR-associated exonuclease, Cas4 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A1154 Protein of unknown function DUF48 K15342 cas1; CRISP-associated protein Cas1
D Rru_A1744 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Rru_A0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Rru_A3202 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Rru_A1553 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Rru_A1668 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Rru_A0292 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Rru_A0089 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Rru_A3530 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Rru_A1898 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Rru_A0639 Regulatory protein RecX K03565 recX; regulatory protein
D Rru_A3036 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Rru_A3258 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1444 Ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A2441 ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Rru_A1445 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rru03029]
D Rru_A0363 Cytochrome b/b6-like K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Rru_A3781 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Rru_A3488 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Rru_A1587 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Rru_A2690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A2702 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A1140 Elongation factor G K02355 fusA; elongation factor G
D Rru_A2691 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Rru_A1663 Ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D Rru_A0074 Helicase-like K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:3.6.4.13]
D Rru_A1851 GTP-binding protein Era K03595 era; GTPase
D Rru_A2032 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Rru_A3631 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Rru_A2072 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Rru_A1779 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Rru_A3176 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Rru_A3175 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Rru_A3177 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Rru_A2291 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D Rru_A1745 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Rru_A1594 surface antigen D15 K07277 SAM50; outer membrane protein insertion porin family
D Rru_A3555 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D Rru_A3643 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Rru_A0587 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0162 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0586 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rru_A0161 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Rru_A3554 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Rru_A2027 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1068 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A0705 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Rru_A2204 Protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Rru_A3339 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rru_A3360 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rru02000]
D Rru_A0189 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A0864 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A2340 ABC transporter, transmembrane region K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Rru_A0188 ABC transporter, transmembrane region K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A0863 ABC transporter, transmembrane region K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A2339 ABC transporter component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Rru_A3561 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rru_A2942 ABC transporter, transmembrane region K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Rru_A1120 ABC transporter, transmembrane region K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Rru_A0844 ABC transporter component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rru_A0881 ABC transporter component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rru_A0882 ABC transporter, transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Rru_B0039 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rru_A0843 ABC transporter component K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Rru_A3236 conserved hypothetical protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Rru_A1497 Cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D Rru_A3300 ABC transporter component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D Rru_A1013 ABC transporter component K15738 uup; ABC transport system ATP-binding/permease protein
D Rru_A3400 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A2074 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Rru_A3401 sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Rru_A3402 sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Rru_A3403 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Rru_A0704 Molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D Rru_A0703 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Rru_A0702 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Rru_A3199 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rru_A0769 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Rru_A3200 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rru_A0768 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D Rru_A3201 ABC transporter component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rru_A0767 ABC transporter component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Rru_A3015 Twin-arginine translocation pathway signal K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Rru_A3012 Binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein
D Rru_A3013 Binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein
D Rru_A3014 ABC transporter component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Rru_A1018 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D Rru_A1015 Binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Rru_A1016 Binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Rru_A0500 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rru_A2047 extracellular solute-binding protein, family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Rru_A0498 Binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rru_A2045 Binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D Rru_A0499 Binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Rru_A2046 Binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D Rru_A0497 ABC transporter component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rru_A2048 ABC transporter component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Rru_A2476 Binding-protein-dependent transport systems inner membrane component K02001 proW; glycine betaine/proline transport system permease protein
D Rru_A2475 Glycine betaine/L-proline transport ATP-binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Rru_A2385 Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D Rru_A2382 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rru_A2384 Binding-protein-dependent transport systems inner membrane component K05846 opuBD; osmoprotectant transport system permease protein
D Rru_A2383 ABC transporter component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Rru_A1642 putative sulfonate/nitrate transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D Rru_A1643 Binding-protein-dependent transport systems inner membrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D Rru_A1644 ABC transporter component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D Rru_A3456 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Rru_A3454 Binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rru_A3455 Binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Rru_A3453 ABC transporter component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Rru_A1260 ABC transporter component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A0095 ABC transporter component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A0092 extracellular solute-binding protein, family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Rru_A0093 Binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein
D Rru_A0094 Binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein
D Rru_A1365 ribose ABC transporter, periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D Rru_A1363 inner-membrane translocator K10440 rbsC; ribose transport system permease protein
D Rru_A1364 ABC transporter component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D Rru_A0247 Periplasmic binding protein/LacI transcriptional regulator K17205 xltC; putative xylitol transport system substrate-binding protein
D Rru_A0248 inner-membrane translocator K17206 xltB; putative xylitol transport system permease protein
D Rru_A0249 ABC transporter component K17207 xltA; putative xylitol transport system ATP-binding protein
D Rru_A0989 Twin-arginine translocation pathway signal K07335 bmpA; basic membrane protein A and related proteins
D Rru_A2784 Basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rru_A1902 Basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Rru_A2786 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rru_A1904 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Rru_A2787 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rru_A1903 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Rru_A2785 ABC transporter component K23537 nupA; general nucleoside transport system ATP-binding protein
D Rru_A1905 ABC transporter component K23537 nupA; general nucleoside transport system ATP-binding protein
D Rru_A2438 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2439 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2910 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A2447 Mammalian cell entry related K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Rru_A0408 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A2445 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A2908 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Rru_A0407 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A2446 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A2909 ABC transporter component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Rru_A2448 Protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D Rru_A2911 ABC-type uncharacterized transport system auxiliary component-like K18480 linN; cholesterol transport system auxiliary component
D Rru_A1528 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Rru_A0056 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Rru_A1261 Binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Rru_A1336 Periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Rru_A1335 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rru_A1338 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rru_A2300 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rru_A2299 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D Rru_A1337 ABC transporter component K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A2301 ABC transporter component K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Rru_A0598 phosphate ABC transporter, periplasmic binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A2035 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Rru_A0599 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Rru_A0600 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Rru_A0601 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Rru_A2087 extracellular solute-binding protein, family 3 K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D Rru_A2089 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10002 gltK; glutamate/aspartate transport system permease protein
D Rru_A2088 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K10003 gltJ; glutamate/aspartate transport system permease protein
D Rru_A2090 ABC transporter component K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A1004 Lysine-arginine-ornithine-binding periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0779 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0439 extracellular solute-binding protein, family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Rru_A0780 Binding-protein-dependent transport systems inner membrane component K09970 aapQ; general L-amino acid transport system permease protein
D Rru_A1003 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09970 aapQ; general L-amino acid transport system permease protein
D Rru_A1002 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09971 aapM; general L-amino acid transport system permease protein
D Rru_A0781 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K09971 aapM; general L-amino acid transport system permease protein
D Rru_A1001 ABC transporter component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A3303 amide-urea binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3417 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3506 putative branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3728 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A1746 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A0563 Twin-arginine translocation pathway signal K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2873 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A2171 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Rru_A3306 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3416 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3508 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3726 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A1751 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A0584 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3529 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Rru_A3307 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3415 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3507 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A3727 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1750 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Rru_A1749 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3304 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3414 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3510 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A0585 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A3724 ABC transporter component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Rru_A1748 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3305 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3413 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3664 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3505 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A3725 ABC transporter component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Rru_A2417 Lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A0778 Lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A0791 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Rru_A2418 Binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rru_A0789 Binding-protein-dependent transport systems inner membrane component K02072 metI; D-methionine transport system permease protein
D Rru_A0788 ABC transporter component K02071 metN; D-methionine transport system ATP-binding protein
D Rru_A2419 ABC transporter component K02071 metN; D-methionine transport system ATP-binding protein
D Rru_A2106 Protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Rru_A2105 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Rru_A2104 ABC transporter component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Rru_A2251 extracellular solute-binding protein, family 3 K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein
D Rru_A2252 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D Rru_A2253 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D Rru_A2250 ABC transporter component K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A1295 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Rru_A0719 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Rru_A1296 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D Rru_A1297 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D Rru_A1298 ABC transporter component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Rru_A0592 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Rru_A0591 Binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Rru_A0590 Binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Rru_A0589 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K15583 oppD; oligopeptide transport system ATP-binding protein
D Rru_A0588 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K10823 oppF; oligopeptide transport system ATP-binding protein
D Rru_A2356 extracellular solute-binding protein, family 5 K12368 dppA; dipeptide transport system substrate-binding protein
D Rru_A2357 Binding-protein-dependent transport systems inner membrane component K12369 dppB; dipeptide transport system permease protein
D Rru_A2358 Binding-protein-dependent transport systems inner membrane component K12370 dppC; dipeptide transport system permease protein
D Rru_A2359 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K12371 dppD; dipeptide transport system ATP-binding protein
D Rru_A2360 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K12372 dppF; dipeptide transport system ATP-binding protein
D Rru_A2277 Nickel ABC transporter, periplasmic nickel-binding K15584 nikA; nickel transport system substrate-binding protein
D Rru_A2276 Binding-protein-dependent transport systems inner membrane component K15585 nikB; nickel transport system permease protein
D Rru_A2275 Binding-protein-dependent transport systems inner membrane component K15586 nikC; nickel transport system permease protein
D Rru_A2274 ABC transporter component K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Rru_A2273 ABC transporter component K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D Rru_A2474 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A1917 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A2014 Twin-arginine translocation pathway signal K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A0799 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A0979 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A2178 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Rru_A1918 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A2013 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A0800 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A0980 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A2176 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Rru_A1919 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A2012 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0801 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0981 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A2177 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Rru_A0982 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A0802 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A1920 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A2011 ABC transporter component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A2175 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Rru_A0803 ABC transporter component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A1921 ABC transporter component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A2174 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Rru_A3166 extracellular solute-binding protein, family 5 K13893 yejA; microcin C transport system substrate-binding protein
D Rru_A3167 Binding-protein-dependent transport systems inner membrane component K13894 yejB; microcin C transport system permease protein
D Rru_A3168 Binding-protein-dependent transport systems inner membrane component K13895 yejE; microcin C transport system permease protein
D Rru_A3169 ABC transporter component K13896 yejF; microcin C transport system ATP-binding protein
D Rru_A3219 Twin-arginine translocation pathway signal K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rru_A0489 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rru_A1136 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Rru_A0490 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rru_A3222 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rru_A1137 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Rru_A0491 ABC transporter component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rru_A3223 ABC transporter component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rru_A1138 ABC transporter component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Rru_A2390 Twin-arginine translocation pathway signal K09815 znuA; zinc transport system substrate-binding protein
D Rru_A2388 ABC-3 transporter component K09816 znuB; zinc transport system permease protein
D Rru_A2389 ABC transporter component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Rru_A2895 Twin-arginine translocation pathway signal K11604 sitA; manganese/iron transport system substrate-binding protein
D Rru_A2893 ABC-3 transporter component K11605 sitC; manganese/iron transport system permease protein
D Rru_A2892 ABC-3 transporter component K11606 sitD; manganese/iron transport system permease protein
D Rru_A2894 ABC transporter component K11607 sitB; manganese/iron transport system ATP-binding protein
D Rru_A2634 Cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Rru_A3500 Cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Rru_A2633 ABC transporter component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Rru_A3501 lipoprotein, putative K10094 cbiK; nickel transport protein
D Rru_A3499 conserved hypothetical protein K16915 cbiL; nickel transport protein
D Rru_A3386 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rru_A1333 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Rru_A1332 Cobalt transport protein K16783 bioN; biotin transport system permease protein
D Rru_A3687 Cobalt transport protein K16783 bioN; biotin transport system permease protein
D Rru_A3688 ABC transporter component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Rru_A1331 ABC transporter component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Rru_A3704 Periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Rru_A3703 ABC-3 transporter component K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Rru_A3702 ABC transporter component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Rru_B0027 ABC-2 K09690 wzm; homopolymeric O-antigen transport system permease protein
D Rru_B0028 ABC transporter related K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Rru_A2943 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Rru_A3075 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Rru_A0011 ABC transporter component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Rru_A1790 ABC-2 transporter component K25180 ybhR; drug efflux transport system permease protein
D Rru_A1791 ABC-2 transporter component K25181 ybhS; drug efflux transport system permease protein
D Rru_A1792 ABC transporter component K25182 ybhF; drug efflux transport system ATP-binding protein
D Rru_A1793 Secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG
D Rru_A1578 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Rru_A2749 Protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Rru_A1579 ABC transporter component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rru_A2748 ABC transporter component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Rru_A0037 Heme exporter protein D (CcmD) K02196 ccmD; heme exporter protein D
D Rru_A0038 Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D Rru_A0039 Cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Rru_A0040 Heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Rru_A3255 Protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Rru_A3254 ABC transporter component K09812 ftsE; cell division transport system ATP-binding protein
D Rru_A0127 ABC-2 transporter component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rru_A0640 ABC-2 transporter component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rru_A2499 ABC-2 transporter component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rru_A3129 ABC-2 transporter component K01992 ABC-2.P; ABC-2 type transport system permease protein
D Rru_A0117 ABC transporter component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rru_A0126 ABC transporter component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rru_A0069 ABC transporter component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rru_A2498 ABC transporter component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rru_A3130 ABC transporter component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Rru_A3653 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rru_A2806 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rru_A2805 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rru_A1292 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Rru_A3150 ABC transporter component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rru_A3651 ABC transporter component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rru_A2804 ABC transporter component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rru_A1291 ABC transporter component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Rru_A2572 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Rru_A0192 Multi antimicrobial extrusion protein MatE K26939 norM; MATE family, multidrug efflux pump
D Rru_A0697 Multi antimicrobial extrusion protein MatE K26939 norM; MATE family, multidrug efflux pump
D Rru_A0678 Multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D Rru_A2380 Major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D Rru_A1657 Major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Rru_A0618 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Rru_A0628 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Rru_A0147 Major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Rru_A2971 Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Rru_A2540 Major facilitator superfamily protein MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D Rru_A0157 Drug resistance transporter EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Rru_A0858 Drug resistance transporter EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Rru_A2925 Major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D Rru_A2789 Major facilitator superfamily protein MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D Rru_A3661 Major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Rru_A0840 Major facilitator superfamily MFS_1 K05373 ybtX; MFS transporter, putative signal transducer
D Rru_A3445 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Rru_A0745 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Rru_A3446 HPrNtr K02784 ptsH; phosphocarrier protein HPr
D Rru_A1972 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D Rru_A1970 PTS fructose IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Rru_A3447 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Rru_A0009 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Rru_A1129 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D Rru_A0022 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A3675 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A3193 Glutathione S-transferase-like K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Rru_A0311 Formate/nitrite transporter K21993 fdhC; formate transporter
D Rru_A1608 MscS Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D Rru_A3072 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Rru_A1995 Divalent cation transporter K06213 mgtE; magnesium transporter
D Rru_A1806 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A0541 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A1842 motA, chemotaxis (motility protein A K02556 motA; chemotaxis protein MotA
D Rru_A1843 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1073 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1807 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A2154 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Rru_A1091 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ
D Rru_A1092 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Rru_A1883 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Rru_A0715 Mg2+ transporter protein, CorA-like K16074 zntB; zinc transporter
D Rru_A0236 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Rru_A0756 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rru_A2211 Porin, Gram-negative type K08720 ompU; outer membrane protein OmpU
D Rru_A0437 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Rru_A0488 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Rru_A0880 TonB-dependent receptor K15721 fyuA; pesticin/yersiniabactin receptor
D Rru_A1440 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D Rru_A0845 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D Rru_A3452 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rru_A0865 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rru_A3220 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rru_A2374 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rru_A2395 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Rru_A3117 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rru_A1487 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Rru_A1594 surface antigen D15 K07277 SAM50; outer membrane protein insertion porin family
D Rru_A0941 competence lipoprotein ComL, putative K05807 bamD; outer membrane protein assembly factor BamD
D Rru_A2099 surface antigen K07278 tamA; translocation and assembly module TamA
D Rru_A2098 Protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Rru_A0012 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D Rru_A0013 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D Rru_A3630 Twin-arginine translocation pathway signal K03643 lptE; LPS-assembly lipoprotein
D Rru_A3773 CBS domain protein K06189 corC; hemolysin (HlyC) family protein
D Rru_A2426 LrgA K06518 cidA; holin-like protein
D Rru_A0905 microcompartments protein K27260 pduA; bacterial microcompartment shell protein
D Rru_A1030 Amino acid permease-associated region K16238 eat; ethanolamine permease
D Rru_A2628 Cation efflux protein K13283 fieF; ferrous-iron efflux pump FieF
D Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 K18902 bpeF; multidrug efflux pump
D Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2094 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A3699 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A3353 Small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Rru_A0272 Small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Rru_A0706 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D Rru_A3140 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D Rru_A1409 L-lactate permease K00427 lldP; L-lactate permease
D Rru_A0635 Na+/solute symporter K14393 actP; cation/acetate symporter
D Rru_A1437 Sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D Rru_A0128 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Rru_A3545 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Rru_A1350 Sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter
D Rru_A1079 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D Rru_A3670 Potassium efflux system protein K26735 KEA4_5_6; K+:H+ antiporter
D Rru_A1134 Cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Rru_A1681 Potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D Rru_A1144 Benzoate membrane transport protein K05782 benE; benzoate membrane transport protein
D Rru_A1534 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family
D Rru_A1209 Chromate transporter K07240 chrA; chromate transporter
D Rru_A0164 Sulfate transporter/antisigma-factor antagonist K03321 TC.SULP; sulfate permease, SulP family
D Rru_A1906 Sulfate transporter/antisigma-factor antagonist K03321 TC.SULP; sulfate permease, SulP family
D Rru_A3678 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Rru_A3677 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Rru_A3676 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rru_A2237 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Rru_A2238 Tripartite ATP-independent periplasmic transporter, DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D Rru_A2239 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D Rru_A1871 Na/Pi cotransporter II-related K03324 yjbB; phosphate:Na+ symporter
D Rru_A1447 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Rru_A1449 Bile acid:sodium symporter K03325 ACR3; arsenite transporter
D Rru_A1637 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Rru_A1638 putative multicomponent Na+-H+ antiporter subunit A K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Rru_A1635 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Rru_A1632 NADH dehydrogenase (quinone) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Rru_A1641 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Rru_A1640 Multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Rru_A1639 Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Rru_A3538 Virulence factor MVIN-like K03980 murJ; putative peptidoglycan lipid II flippase
D Rru_A3182 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins
D Rru_A0290 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Rru_A0657 Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO
D Rru_A0328 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Rru_A0048 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D Rru_A3712 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein
D Rru_A2296 Protein of unknown function DUF165 K09125 yhhQ; queuosine precursor transporter
D Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Rru_A2518 Multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Rru_A0951 Cell cycle protein K03588 ftsW; cell division protein FtsW
D Rru_A0282 Protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Rru_A2597 Iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Rru_A2809 Iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Rru_A2600 Protein of unknown function DUF451 K07224 efeO; iron uptake system component EfeO
D Rru_A2599 Tat-translocated enzyme K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D Rru_A2808 periplasmic protein-probably involved in high-affinity Fe2+ transport K07230 p19; periplasmic iron binding protein
D Rru_A1753 High-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D Rru_A2153 TonB-like K03832 tonB; periplasmic protein TonB
D Rru_A1095 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein
D Rru_A1094 TolB protein K03641 tolB; TolB protein
D Rru_A1818 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Rru_A1320 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A3673 Glutaconyl-CoA decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Rru_A0049 Biotin/lipoyl attachment K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Rru_A0050 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Rru_A1322 alpha subunit of malonate decarboxylase K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D Rru_A1324 beta subunit of malonate decarboxylase K20510 madC; malonyl-S-ACP:biotin-protein carboxyltransferase subunit MadC [EC:2.1.3.10]
D Rru_A1325 hypothetical protein K20511 madD; malonyl-S-ACP:biotin-protein carboxyltransferase subunit MadD [EC:2.1.3.10]
D Rru_A1323 Malonate decarboxylase delta subunit K13931 mdcC; malonate decarboxylase delta subunit
D Rru_A3058 putative suppressor for copper-sensitivity B precursor K08344 scsB; suppressor for copper-sensitivity B
D Rru_A1283 Membrane-bound tetrahaem cytochrome TorC/YecK K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D Rru_A1284 Cytoplasmic chaperone TorD K03533 torD; TorA specific chaperone
D Rru_A1287 Trimethylamine-N-oxide reductase (cytochrome c) K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D Rru_A0859 Secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D Rru_A0156 Secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D Rru_B0040 Type I secretion membrane fusion protein, HlyD K12537 hasE; membrane fusion protein, type I secretion system
D Rru_A1117 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2050 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3700 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3235 Secretion protein HlyD K13888 macA; membrane fusion protein, macrolide-specific efflux system
D Rru_A1490 Protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Rru_A3119 ATPases involved in chromosome partitioning-like K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Rru_A3118 Lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator
D Rru_A2469 FeoA K04758 feoA; ferrous iron transport protein A
D Rru_A2468 FeoA K04758 feoA; ferrous iron transport protein A
D Rru_A2470 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Rru_A2272 TspO and MBR related proteins K05770 TSPO; translocator protein
D Rru_A0035 Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:rru02044]
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_B0039 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Rru_B0040 Type I secretion membrane fusion protein, HlyD K12537 hasE; membrane fusion protein, type I secretion system
D Rru_A0109 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Rru_A0113 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Rru_A0108 Peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Rru_A0114 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Rru_A0118 type II secretion system protein E K02669 pilT; twitching motility protein PilT
D Rru_A3527 Protein of unknown function YGGT K02221 yggT; YggT family protein
D Rru_A1602 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Rru_A0539 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rru_A2821 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rru_A2827 conserved hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D Rru_A0545 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF
D Rru_A0543 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rru_A0526 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rru_A0542 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A3170 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A2829 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Rru_A2830 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rru_A2823 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rru_A2822 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rru_A0808 type II secretion system protein E K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D Rru_A0807 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D Rru_A0806 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD
D Rru_A0805 conjugal transfer protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D Rru_A3151 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D Rru_A0235 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Rru_A3610 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Rru_A1764 SecD export membrane protein K03072 secD; preprotein translocase subunit SecD
D Rru_A3671 protein translocase subunit secD / protein translocase subunit secF K12257 secDF; SecD/SecF fusion protein
D Rru_A2701 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Rru_A1763 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Rru_A1888 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Rru_A2668 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Rru_A1184 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Rru_A1181 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Rru_A1765 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Rru_A3339 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Rru_A1773 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Rru_A1772 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Rru_A1771 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rru02042]
D Rru_A0756 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Rru_A0661 Hly-III related proteins K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rru02022]
D Rru_A3543 Periplasmic Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Rru_A0603 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Rru_A2226 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Rru_A2225 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Rru_A1158 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Rru_A1159 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Rru_A1282 two component transcriptional regulator, winged helix family K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D Rru_A3423 Periplasmic Sensor Signal Transduction Histidine Kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Rru_A3422 two component transcriptional regulator, winged helix family K14981 chvI; two-component system, OmpR family, response regulator ChvI
D Rru_A2930 Periplasmic Sensor Signal Transduction Histidine Kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rru_A2929 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rru_A3187 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rru_A2913 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Rru_A0376 transcriptional regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D Rru_A1677 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Rru_A1678 nitrogen metabolism transcriptional regulator, NtrC, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Rru_A1679 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Rru_A1680 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Rru_A1384 multi-sensor signal transduction histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D Rru_A1385 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Rru_A1436 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D Rru_A1435 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D Rru_A1170 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D Rru_A3104 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator
D Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2327 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A0522 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2837 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1398 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2326 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2330 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1406 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A0523 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A2323 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rru_A3206 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK
D Rru_A2820 multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Rru_A0525 two component transcriptional regulator, winged helix family / cell cycle transcriptional regulator CtrA K13584 ctrA; two-component system, cell cycle response regulator CtrA
D Rru_A2101 two component, sigma54 specific, transcriptional regulator, Fis family K10912 luxO; two-component system, repressor protein LuxO
C 02035 Bacterial motility proteins [BR:rru02035]
D Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A2327 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1399 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Rru_A1402 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A1400 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2322 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A2562 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Rru_A1407 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Rru_A2325 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A0524 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A1405 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Rru_A1406 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A0523 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A2323 Two component CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Rru_A0522 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2837 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A1398 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2326 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A2330 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Rru_A3513 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A3665 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0158 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1712 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1293 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1160 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2484 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2546 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2554 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2321 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2023 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2076 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A2146 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0755 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1401 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1403 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1404 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0632 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A1053 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Rru_A0543 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Rru_A0526 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Rru_A0527 conserved hypothetical protein K02413 fliJ; flagellar protein FliJ
D Rru_A2829 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Rru_A2830 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Rru_A2823 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Rru_A2822 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Rru_A0539 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Rru_A2821 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Rru_A0544 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Rru_A2840 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Rru_A0542 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A3170 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Rru_A0545 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF
D Rru_A2849 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Rru_A2844 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Rru_A2845 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Rru_A2841 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Rru_A1819 hypothetical protein K02415 fliL; flagellar protein FliL
D Rru_A2824 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Rru_A0548 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Rru_A2826 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Rru_A2825 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Rru_A0547 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rru_A2533 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Rru_A2842 conserved hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF
D Rru_A2843 conserved hypothetical protein K02392 flgG; flagellar basal-body rod protein FlgG
D Rru_A2850 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D Rru_A0546 conserved hypothetical protein K02390 flgE; flagellar hook protein FlgE
D Rru_A2532 conserved hypothetical protein K02390 flgE; flagellar hook protein FlgE
D Rru_A2431 Protein of unknown function DUF1078 K02390 flgE; flagellar hook protein FlgE
D Rru_A2852 conserved hypothetical protein K02396 flgK; flagellar hook-associated protein 1
D Rru_A2528 putative flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rru_A2853 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Rru_A2534 Flagellin-like K02406 fliC; flagellin
D Rru_A2858 Flagellin-like K02406 fliC; flagellin
D Rru_A3292 hypothetical protein K02406 fliC; flagellin
D Rru_A2535 Flagellar hook-associated protein 2 (FliD, filament cap protein) K02407 fliD; flagellar hook-associated protein 2
D Rru_A2536 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS
D Rru_A1806 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A0541 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Rru_A1842 motA, chemotaxis (motility protein A K02556 motA; chemotaxis protein MotA
D Rru_A1843 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1073 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A1807 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Rru_A2856 putative flagellar protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D Rru_A2857 Flagellar FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D Rru_A0533 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D Rru_A0532 Cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Rru_A0118 type II secretion system protein E K02669 pilT; twitching motility protein PilT
D Rru_A0114 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Rru_A0108 Peptidase A24A, prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rru04812]
D Rru_A0448 Protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D Rru_A0470 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rru_A0944 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rru_A0945 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Rru_A3627 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Rru_A2118 ATPase K03496 parA; chromosome partitioning protein
D Rru_B0001 putative partition protein K03496 parA; chromosome partitioning protein
D Rru_A1526 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Rru_A3136 putative partition-related protein K03496 parA; chromosome partitioning protein
D Rru_A3628 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rru04147]
D Rru_A0072 chaperone protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Rru_A1885 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Rru_A0222 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Rru_A0221 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Rru_A2465 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Rru_A2897 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Rru_A0587 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A0162 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Rru_A3555 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D Rru_A2947 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Rru_A0244 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Rru_A2690 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A2702 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Rru_A3592 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Rru_A2191 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1312 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A3509 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Rru_A1946 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A0274 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1380 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A1469 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3387 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Rru_A3444 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Rru_A2667 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Rru_A0607 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Rru_A0397 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Rru_A3751 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Rru_A0786 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D Rru_A2576 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Rru_A2009 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rru_A3461 Carbohydrate kinase, FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Rru_A2079 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A2086 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1252 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1253 Glutamine synthetase, catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Rru_A1837 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rru_A0141 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Rru_A3581 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Rru_A1289 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Rru_A2456 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Rru_A3655 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Rru_A1878 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A1215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Rru_A3078 Electron transfer flavoprotein K03522 fixB; electron transfer flavoprotein alpha subunit
D Rru_A2266 Electron transfer flavoprotein K03522 fixB; electron transfer flavoprotein alpha subunit
D Rru_A1889 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A1358 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Rru_A2381 lipocalin-like protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rru02048]
D Rru_A0833 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0169 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0347 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A0179 CRISPR-associated protein, Cas1 family / CRISPR-associated exonuclease, Cas4 family K15342 cas1; CRISP-associated protein Cas1
D Rru_A1154 Protein of unknown function DUF48 K15342 cas1; CRISP-associated protein Cas1
D Rru_A0452 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A1153 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A0348 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A0178 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A0834 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A0168 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Rru_A0340 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rru_A0828 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rru_A0175 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Rru_A0832 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Rru_A2343 Protein of unknown function DUF83 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Rru_A0830 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Rru_A0831 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Rru_A0829 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
D Rru_A0174 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Rru_A0341 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Rru_A0173 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D Rru_A0343 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D Rru_A0172 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Rru_A0344 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Rru_A0171 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D Rru_A0345 CRISPR-associated protein, Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D Rru_A0346 CRISPR-associated protein, CT1974 family K19126 casE; CRISPR system Cascade subunit CasE
D Rru_A0170 CRISPR-associated protein, CT1974 K19126 casE; CRISPR system Cascade subunit CasE
D Rru_A0453 CRISPR-associated endonuclease, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D Rru_A3210 DNA methylase N-4/N-6 K13581 ccrM; modification methylase [EC:2.1.1.72]
D Rru_A2488 Putative RNA methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Rru_A0242 Type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Rru_A0241 DNA methylase N-4/N-6 K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Rru_A0976 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Rru_A3196 Plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D Rru_A3195 Helix-turn-helix protein, CopG K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Rru_A0975 Prevent-host-death protein K19159 yefM; antitoxin YefM
D Rru_A1246 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A2443 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A1974 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Rru_A2442 transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D Rru_A1217 Phage shock B K03970 pspB; phage shock protein B
D Rru_A3552 hypothetical protein K19163 ccdB; toxin CcdB
D Rru_A3553 conserved hypothetical protein K19164 ccdA; antitoxin CcdA
D Rru_A0699 Plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Rru_A0700 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D Rru_A3240 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D Rru_A3537 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain K07746 parD1_3_4; antitoxin ParD1/3/4
D Rru_B0035 Death-on-curing protein K07341 doc; death on curing protein
D Rru_A2481 putative membrane protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Rru_A1064 Plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rru_A2020 Plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rru_A3069 Plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Rru_A2482 transcription regulator containing helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Rru_A1065 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D Rru_A2019 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D Rru_A2779 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D Rru_A3068 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D Rru_A1269 Rv0623-like transcription factor K19687 vapB; antitoxin VapB
D Rru_A0091 PilT protein-like K07062 fitB; toxin FitB [EC:3.1.-.-]
D Rru_A0944 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Rru_A0470 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Rru_A1848 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Rru_A2710 Gram negative topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Rru_A1601 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A0688 glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Rru_A1727 Protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Rru_A2027 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Rru_A1068 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rru04090]
C 01504 Antimicrobial resistance genes [BR:rru01504]
D Rru_A2925 Major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D Rru_A0228 Twin-arginine translocation pathway signal K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Rru_A2880 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Rru_A1117 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2050 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A3700 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2094 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A3699 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Rru_A2930 Periplasmic Sensor Signal Transduction Histidine Kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D Rru_A2929 two component transcriptional regulator, winged helix family K18144 adeR; two-component system, OmpR family, response regulator AdeR
D Rru_A1798 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 K18902 bpeF; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rru00537]
D Rru_A1289 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rru03100]
D Rru_AR0012 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0062 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Rru_AR0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Rru_AR0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Rru_AR0056 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Rru_AR0035 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Rru_AR0010 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rru_AR0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Rru_AR0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rru_AR0025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Rru_AR0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Rru_AR0039 tRNA-His K14226 tRNA-His; tRNA His
D Rru_AR0005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Rru_AR0067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Rru_AR0016 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rru_AR0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Rru_AR0038 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0053 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0009 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D Rru_AR0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Rru_AR0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0057 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Rru_AR0033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0026 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Rru_AR0069 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0051 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0055 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Rru_AR0048 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Rru_AR0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Rru_AR0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_AR0058 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_AR0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Rru_AR0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0064 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0046 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Rru_AR0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0007 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Rru_AR0008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Rru_AR0066 ffs; SRP RNA, 4.5S RNA K01983 ffs; SRP RNA
D Rru_AR0024 rnpB; RNA component of RNase P K01978 rnpB; M1 RNA
D Rru_AR0040 ssrA; tmRNA, 10Sa RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Rru_A2747 Short-chain dehydrogenase/reductase SDR K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D Rru_A0058 Dihydrokaempferol 4-reductase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D Rru_A2369 conserved hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Rru_A0965 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D Rru_A0967 Carbon-monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D Rru_A0966 xanthine dehydrogenase, molybdenum binding subunit apoprotein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D Rru_A1978 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Rru_A1977 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Rru_A2185 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D Rru_A0474 Zinc-containing alcohol dehydrogenase superfamily K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D Rru_A0460 NADP oxidoreductase, coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D Rru_A0265 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Rru_A1317 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Rru_A2265 Electron transfer flavoprotein-ubiquinone oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Rru_A0088 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rru_A1056 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rru_A0384 NADPH-quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rru_A3371 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rru_A3620 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Rru_A1417 thioredoxin-disulfide reductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D Rru_A2362 Protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Rru_A1907 Protein-methionine-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Rru_A0332 Glutathione S-transferase-like K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Rru_A0374 conserved hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D Rru_A0593 Twin-arginine translocation pathway signal K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Rru_A1789 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Rru_A1418 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Rru_A0580 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rru_A0476 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D Rru_A0321 NADH dehydrogenase (ubiquinone), 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D Rru_A0375 Pirin-like K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Rru_A0063 Amine oxidase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D Rru_A0530 Ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Rru_A1992 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Rru_A0449 Radical SAM K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rru_A2999 Radical SAM K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rru_A0916 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Rru_A0315 NADH dehydrogenase (quinone) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Rru_A0314 NADH dehydrogenase (quinone) K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D Rru_A0320 NADH dehydrogenase (quinone) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rru_A1799 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Rru_A1910 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Rru_A0725 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Rru_A2351 Macrocin-O-methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D Rru_A3774 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Rru_A3769 lyso-ornithine lipid acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D Rru_A2711 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D Rru_A0045 3-oxoacyl-[acyl-carrier-protein] synthase II K14660 nodE; nodulation protein E [EC:2.3.1.-]
D Rru_A2436 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Rru_A1845 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Rru_A1009 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Rru_A1389 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Rru_A1319 Triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Rru_A1543 Putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Rru_A0641 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Rru_A3142 Type III effector Hrp-dependent outers K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D Rru_A3615 Protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Rru_A0223 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D Rru_A2038 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Rru_A1327 hypothetical protein K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D Rru_A1625 conserved hypothetical protein K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37]
D Rru_A0734 Thioesterase superfamily K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Rru_A1058 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rru_A1090 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Rru_A2162 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Rru_A1700 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Rru_A2707 Alpha/beta hydrolase fold K01175 ybfF; esterase [EC:3.1.-.-]
D Rru_A1008 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D Rru_A2113 Serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Rru_A0960 AmpD (negative regulator of AmpC) K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Rru_A1044 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rru_A3350 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Rru_A2180 Peptidase S33, tricorn interacting factor 1 K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D Rru_A0739 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Rru_A0369 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Rru_A2365 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent helicase HrpB [EC:3.6.4.13]
D Rru_A1812 Protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Rru_A3143 Class II aldolase/adducin-like K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D Rru_A0359 Class II aldolase/adducin-like K24269 ald2; 5-deoxyribulose 1-phosphate aldolase [EC:4.1.2.62]
D Rru_A1547 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Rru_A0065 Squalene/phytoene synthase K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D Rru_A0098 cystathionine gamma-synthase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D Rru_A1742 Peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Rru_A2503 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D Rru_A1326 hypothetical protein K20415 madH; ACP-SH:acetate ligase [EC:6.2.1.35]
D Rru_A3324 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Rru_A1027 (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Rru_A0735 Sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D Rru_A1413 Protein of unknown function DUF224, cysteine-rich region K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Rru_A3606 Protein of unknown function DUF224, cysteine-rich region K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Rru_A3605 Iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Rru_A3603 Protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Rru_A1411 Protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D Rru_A2026 Ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D Rru_A0077 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D Rru_A0323 4Fe-4S ferredoxin, iron-sulfur binding K05796 hydN; electron transport protein HydN
D Rru_A0318 4Fe-4S ferredoxin, iron-sulfur binding K12143 hyfH; hydrogenase-4 component H
D Rru_A2281 NifQ K15790 nifQ; nitrogen fixation protein NifQ
D Rru_A2987 conserved hypothetical protein K13795 citB; citrate/tricarballylate utilization protein
D Rru_A2986 Fumarate reductase/succinate dehydrogenase flavoprotein-like K13796 cobZ; tricarballylate dehydrogenase
D Rru_A2284 Dinitrogenase iron-molybdenum cofactor biosynthesis K02596 nifX; nitrogen fixation protein NifX
D Rru_A0998 NifT/FixU K02593 nifT; nitrogen fixation protein NifT
D Rru_A0997 NifZ K02597 nifZ; nitrogen fixation protein NifZ
D Rru_A0796 Radical SAM K02585 nifB; nitrogen fixation protein NifB
D Rru_A0994 Nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Rru_A2285 Nitrogenase molybdenum-iron cofactor biosynthesis protein K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Rru_A2286 Nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Rru_A0379 Flavodoxin, long chain K03839 fldA; flavodoxin I
D Rru_A3077 Electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Rru_A2267 Electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Rru_A2264 ferredoxin K03855 fixX; ferredoxin like protein
D Rru_A2268 Nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D Rru_A3516 conserved hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Rru_A0150 conserved hypothetical protein K06203 cysZ; CysZ protein
D Rru_A0910 ethanolamine utilization protein eutJ K04024 eutJ; ethanolamine utilization protein EutJ
D Rru_A3634 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
D Rru_A1141 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Rru_A0484 membrane protein, putative K07027 K07027; glycosyltransferase 2 family protein
D Rru_A2122 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Rru_A0671 cobalamin synthesis CobW protein K02234 cobW; cobalamin biosynthesis protein CobW
D Rru_A3566 HemY-like K02498 hemY; HemY protein
D Rru_A3797 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Rru_A2057 Molybdopterin-guanine dinucleotide biosynthesis MobB region K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Rru_A0487 Alpha/beta hydrolase fold K06049 bchO; magnesium chelatase accessory protein
D Rru_A1045 conserved hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D Rru_A3228 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
D Rru_A1876 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D Rru_A3083 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Rru_A2724 Phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D Rru_A1804 N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Rru_A1521 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Rru_A1914 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Rru_A0555 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Rru_A1130 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D Rru_A2110 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Rru_A1549 Trigger factor K03545 tig; trigger factor
D Rru_A0594 Protein of unknown function UPF0191 K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Rru_A1864 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Rru_A0307 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC
D Rru_A1165 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC
D Rru_A0306 Hydrogenase formation HypD protein K04654 hypD; hydrogenase expression/formation protein HypD
D Rru_A0305 Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Rru_A0308 Hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Rru_A3589 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Rru_A0970 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Rru_A0732 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Rru_A3348 Protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Rru_A3692 Protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Rru_A3194 SMF protein K04096 smf; DNA processing protein
D Rru_B0016 Phage integrase K07357 fimB; type 1 fimbriae regulatory protein FimB
D Rru_A2660 Recombination protein MgsA K07478 ycaJ; putative ATPase
D Rru_A2278 Transposase IS66 K07484 K07484; transposase
D Rru_B0033 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Rru_A0817 Transposase, mutator type K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
D Rru_A1218 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Rru_A3472 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Rru_A1475 Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D Rru_A2034 Phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D Rru_A2655 Intracellular septation protein A K06190 ispZ; intracellular septation protein
D Rru_A1428 Cobyrinic acid a,c-diamide synthase K07321 cooC; CO dehydrogenase maturation factor
D Rru_A1233 Peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Rru_A0892 stress protein K05792 terA; tellurite resistance protein TerA
D Rru_A0894 stress protein K05795 terD; tellurium resistance protein TerD
D Rru_A0893 stress protein K05791 terZ; tellurium resistance protein TerZ
D Rru_A3001 Carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Rru_A0259 Carbon starvation protein CstA K06200 cstA; carbon starvation protein
D Rru_A0148 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Rru_A0721 Anti-Sigm factor, ChrR K07167 chrR; putative transcriptional regulator
D Rru_A3771 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Rru_A1603 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Rru_A0634 Cyclic nucleotide-binding domain (cNMP-BD) protein K07182 K07182; CBS domain-containing protein
D Rru_A3294 KaiB K08481 kaiB; circadian clock protein KaiB
D Rru_A2543 KaiB K08481 kaiB; circadian clock protein KaiB
D Rru_A3295 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D Rru_A2542 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D Rru_A0055 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Rru_A3131 Secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein
D Rru_A0096 Secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein
D Rru_A0036 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Rru_A0032 TPR repeat K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Rru_A0033 Cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Rru_A0906 polyhedral shell protein, EutL/PduB type K27263 pduB; bacterial microcompartment shell protein
D Rru_A0908 microcompartments protein K27266 pduJ; bacterial microcompartment shell protein
D Rru_A0907 microcompartments protein K27267 pduK; bacterial microcompartment shell protein
C 99994 Others
D Rru_A3544 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Rru_A0602 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Rru_A2196 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin
D Rru_A3145 Twin-arginine translocation pathway signal K03670 mdoG; periplasmic glucans biosynthesis protein
D Rru_A2135 Twin-arginine translocation pathway signal K03670 mdoG; periplasmic glucans biosynthesis protein
D Rru_A0891 Tellurite resistance TerB K05793 terB; tellurite resistance protein TerB
D Rru_A3680 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D Rru_A0890 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D Rru_A1673 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Rru_A0270 Protein of unknown function DUF525 K06195 apaG; ApaG protein
D Rru_A1655 Hemerythrin HHE cation binding region K07216 hr; hemerythrin
D Rru_A1119 NnrS K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Rru_A0405 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Rru_A3284 Secretion chaperone CsaA K06878 K06878; tRNA-binding protein
D Rru_A3110 Cyclic nucleotide-binding domain (cNMP-BD) protein K07001 K07001; NTE family protein
D Rru_A1038 Patatin K07001 K07001; NTE family protein
D Rru_A3343 pyrimidine 5-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D Rru_A2305 Haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Rru_A2573 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Rru_A2571 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Rru_A0430 Ribonuclease BN K07058 K07058; membrane protein
D Rru_A2625 tRNA-processing RNAse BN K07058 K07058; membrane protein
D Rru_A3609 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D Rru_A3475 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D Rru_A0103 SlyX K03745 slyX; SlyX protein
D Rru_A2083 CreA K05805 creA; CreA protein
D Rru_A1353 conserved hypothetical protein K08995 K08995; putative membrane protein
D Rru_A1982 SEC-C domain protein K09858 K09858; SEC-C motif domain protein
D Rru_A1166 hydrogenase expression/formation protein hupH K03618 hyaF; hydrogenase-1 operon protein HyaF
D Rru_A1476 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D Rru_A0478 Radical SAM K06871 K06871; uncharacterized protein
D Rru_A3018 hypothetical protein K06884 K06884; uncharacterized protein
D Rru_A3622 Protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Rru_A2039 conserved hypothetical protein Rv2307c K06889 K06889; uncharacterized protein
D Rru_A3558 Protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D Rru_A1766 Protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Rru_A3008 Protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Rru_A2059 Metal dependent phosphohydrolase, HD region K06950 K06950; uncharacterized protein
D Rru_A1266 Photosystem I assembly BtpA K06971 K06971; uncharacterized protein
D Rru_A1981 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Rru_A0380 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Rru_A0057 conserved hypothetical protein K07003 K07003; uncharacterized protein
D Rru_A1926 conserved hypothetical protein K07005 K07005; uncharacterized protein
D Rru_A1387 conserved hypothetical protein K07005 K07005; uncharacterized protein
D Rru_A2184 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D Rru_A3127 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D Rru_A2030 conserved hypothetical protein K07018 K07018; uncharacterized protein
D Rru_A2613 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Rru_A1947 nucleotidyltransferase-like K07074 K07074; uncharacterized protein
D Rru_B0012 DNA polymerase, beta-like region K07075 K07075; uncharacterized protein
D Rru_A2288 DNA polymerase, beta-like region K07075 K07075; uncharacterized protein
D Rru_A0137 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Rru_A0608 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Rru_A2100 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rru_A0685 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Rru_A3006 Protein of unknown function DUF839 K07093 K07093; uncharacterized protein
D Rru_A1715 Twin-arginine translocation pathway signal K07112 K07112; uncharacterized protein
D Rru_A1716 YeeE/YedE K07112 K07112; uncharacterized protein
D Rru_A2522 conserved hypothetical protein PA0741 K07118 K07118; uncharacterized protein
D Rru_A3334 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D Rru_A3710 Peptidase S16, lon-like K07157 K07157; uncharacterized protein
D Rru_A0969 VWA containing CoxE-like K07161 K07161; uncharacterized protein
D Rru_A3338 Protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Rru_A1645 Protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Rru_A2884 GatB/Yqey K09117 K09117; uncharacterized protein
D Rru_A3526 Protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Rru_A0237 Protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Rru_A3355 Uncharacterized conserved protein UCP006173 K09160 K09160; uncharacterized protein
D Rru_A3044 conserved hypothetical protein K09190 K09190; uncharacterized protein
D Rru_A1814 Carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D Rru_A0973 conserved hypothetical protein K09700 K09700; uncharacterized protein
D Rru_A0724 Protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D Rru_A0086 Protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D Rru_A3572 YCII-related K09780 K09780; uncharacterized protein
D Rru_A2502 Protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Rru_A3709 Protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Rru_A3361 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Rru_A1893 Protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein
D Rru_A1231 Protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein
D Rru_A2766 Protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D Rru_A2458 Protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D Rru_A1221 conserved hypothetical protein K09921 K09921; uncharacterized protein
D Rru_A2793 Protein of unknown function DUF1006 K09927 K09927; uncharacterized protein
D Rru_A1855 conserved hypothetical transmembrane protein K09928 K09928; uncharacterized protein
D Rru_A2783 Predicted periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein
D Rru_A1688 conserved hypothetical protein K09965 K09965; uncharacterized protein
D Rru_A3045 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Rru_A1627 hypothetical protein K09978 K09978; uncharacterized protein
D Rru_A2144 conserved hypothetical protein K09982 K09982; uncharacterized protein
D Rru_A2205 Protein of unknown function DUF1321 K09985 K09985; uncharacterized protein
D Rru_A0368 Protein of unknown function DUF1285 K09986 K09986; uncharacterized protein
D Rru_A1055 Protein of unknown function DUF1013 K09987 K09987; uncharacterized protein
D Rru_A1797 conserved hypothetical protein K09991 K09991; uncharacterized protein
D Rru_A1980 Protein of unknown function DUF1022 K07276 K07276; uncharacterized protein
D Rru_A3780 LSU ribosomal protein L7AE K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 21, 2024