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Transcription Machinery - Saccharomyces cerevisiae (budding yeast)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E YDL140C RPO21; DNA-directed RNA polymerase II core subunit RPO21 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E YOR151C RPB2; DNA-directed RNA polymerase II core subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E YIL021W RPB3; DNA-directed RNA polymerase II core subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E YOL005C RPB11; DNA-directed RNA polymerase II core subunit RPB11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E YJL140W RPB4; DNA-directed RNA polymerase II subunit RPB4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E YDR404C RPB7; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E YGL070C RPB9; DNA-directed RNA polymerase II core subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E YBR154C RPB5; DNA-directed RNA polymerase core subunit RPB5 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E YPR187W RPO26; DNA-directed RNA polymerase core subunit RPO26 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E YOR224C RPB8; DNA-directed RNA polymerase core subunit RPB8 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E YHR143W-A RPC10; DNA-directed RNA polymerase core subunit RPC10 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E YOR210W RPB10; DNA-directed RNA polymerase core subunit RPB10 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E YOR194C TOA1; transcription initiation factor IIA large subunit K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E YKL058W TOA2; transcription initiation factor IIA subunit gamma K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E YPR086W SUA7; transcription factor TFIIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E YER148W SPT15; TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E YGR274C TAF1; histone acetyltransferase K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
E YCR042C TAF2; Taf2p K03128 TAF2; transcription initiation factor TFIID subunit 2
E YPL011C TAF3; Taf3p K14650 TAF3; transcription initiation factor TFIID subunit 3
E YBR198C TAF5; chromatin modification protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E YGL112C TAF6; TATA-binding protein-associated factor TAF6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E YMR227C TAF7; TATA-binding protein-associated factor TAF7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E YML114C TAF8; Taf8p K14649 TAF8; transcription initiation factor TFIID subunit 8
E YMR236W TAF9; chromatin modification protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E YDR167W TAF10; Taf10p K03134 TAF10; transcription initiation factor TFIID subunit 10
E YML015C TAF11; TATA-binding protein-associated factor TAF11 K03135 TAF11; transcription initiation factor TFIID subunit 11
E YDR145W TAF12; Taf12p K03126 TAF12; transcription initiation factor TFIID subunit 12
E YML098W TAF13; Taf13p K03127 TAF13; transcription initiation factor TFIID subunit 13
E YPL129W TAF14; TATA-binding protein-associated factor TAF14 K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit
E YDR432W NPL3; mRNA-binding protein NPL3 K14651 TAF15; transcription initiation factor TFIID subunit 15
D TFIIE
E YKL028W TFA1; transcription factor TFIIE subunit TFA1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E YKR062W TFA2; transcription factor TFIIE subunit TFA2 K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E YGR186W TFG1; transcription factor IIF subunit TFG1 K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E YGR005C TFG2; transcription factor IIF subunit TFG2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E YDR311W TFB1; TFIIH/NER complex subunit TFB1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E YLR005W SSL1; TFIIH/NER complex subunit SSL1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E YPR056W TFB4; TFIIH/NER complex subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E YPL122C TFB2; TFIIH/NER complex subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E YIL143C SSL2; TFIIH/NER complex ATPase/helicase subunit SSL2 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E YER171W RAD3; TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E YDR079C-A TFB5; TFIIH complex subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E YDL108W KIN28; TFIIH complex serine/threonine-protein kinase subunit KIN28 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E YDR460W TFB3; TFIIH/NER complex subunit TFB3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E YPR025C CCL1; TFIIH complex kinase subunit CCL1 K06634 CCNH; cyclin H
C Mediator complex
D Head
E YHR058C MED6; mediator complex subunit MED6 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E YBR193C MED8; Med8p K15130 MED8; mediator of RNA polymerase II transcription subunit 8, fungi type
E YMR112C MED11; Med11p K15132 MED11; mediator of RNA polymerase II transcription subunit 11, fungi type
E YER022W SRB4; Srb4p K15134 SRB4; mediator of RNA polymerase II transcription subunit 17, fungi type
E YGR104C SRB5; Srb5p K15136 SRB5; mediator of RNA polymerase II transcription subunit 18, fungi type
E YBL093C ROX3; Rox3p K15138 ROX3; mediator of RNA polymerase II transcription subunit 19, fungi type
E YBR253W SRB6; Srb6p K15140 SRB6; mediator of RNA polymerase II transcription subunit 22, fungi type
D Middle
E YPR070W MED1; Med1p K15145 MED1; mediator of RNA polymerase II transcription subunit 1, fungi type
E YOR174W MED4; Med4p K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E YGL151W NUT1; Nut1p K15147 MED5; mediator of RNA polymerase II transcription subunit 5
E YOL135C MED7; mediator complex subunit MED7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E YNR010W CSE2; Cse2p K15150 CSE2; mediator of RNA polymerase II transcription subunit 9, fungi type
E YPR168W NUT2; mediator complex subunit NUT2 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E YDR308C SRB7; Srb7p K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E YGL127C SOH1; mediator complex subunit SOH1 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E YDL005C MED2; Med2p K15154 MED2; mediator of RNA polymerase II transcription subunit 2
E YGL025C PGD1; Pgd1p K15155 MED3; mediator of RNA polymerase II transcription subunit 3
E YLR071C RGR1; Rgr1p K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E YOL051W GAL11; Gal11p K15158 GAL11; mediator of RNA polymerase II transcription subunit 15, fungi type
E YNL236W SIN4; Sin4p K15160 SIN4; mediator of RNA polymerase II transcription subunit 16, fungi type
D CDK-module
E YPL042C SSN3; cyclin-dependent serine/threonine protein kinase SSN3 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E YNL025C SSN8; cyclin-dependent protein serine/threonine kinase regulator SSN8 K15161 CCNC; cyclin-C
E YCR081W SRB8; Srb8p K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type
E YDR443C SSN2; Ssn2p K15165 SSN2; mediator of RNA polymerase II transcription subunit 13, fungi type
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
E YGR252W GCN5; histone acetyltransferase GCN5 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E YHR099W TRA1; histone acetyltransferase TRA1 K08874 TRRAP; transformation/transcription domain-associated protein
E YDR392W SPT3; transcriptional regulator SPT3 K11313 SUPT3H; transcription initiation protein SPT3
E YBR081C SPT7; SAGA histone acetyltransferase complex subunit SPT7 K11359 SPT7; transcriptional activator SPT7
E YLR055C SPT8; SAGA complex subunit SPT8 K11360 SPT8; transcriptional activator SPT8
E YOL148C SPT20; Spt20p K11361 SPT20; transcription factor SPT20
E YPL254W HFI1; Hfi1p K11362 HFI1; transcriptional coactivator HFI1/ADA1
E YDR448W ADA2; chromatin-binding transcription regulator ADA2 K11314 TADA2A; transcriptional adapter 2-alpha
E YDR176W NGG1; histone acetyltransferase NGG1 K11315 TADA3; transcriptional adapter 3
E YCR042C TAF2; Taf2p K03128 TAF2; transcription initiation factor TFIID subunit 2
E YBR198C TAF5; chromatin modification protein K03130 TAF5; transcription initiation factor TFIID subunit 5
E YGL112C TAF6; TATA-binding protein-associated factor TAF6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E YMR227C TAF7; TATA-binding protein-associated factor TAF7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E YMR236W TAF9; chromatin modification protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E YDR167W TAF10; Taf10p K03134 TAF10; transcription initiation factor TFIID subunit 10
E YDR145W TAF12; Taf12p K03126 TAF12; transcription initiation factor TFIID subunit 12
E YPL047W SGF11; SAGA histone acetyltransferase complex subunit SGF11 K11363 SGF11; SAGA-associated factor 11
E YCL010C SGF29; Sgf29p K11364 SGF29; SAGA-associated factor 29
E YGL066W SGF73; deubiquitination module subunit SGF73 K11365 SGF73; SAGA-associated factor 73
E YER164W CHD1; chromatin-remodeling ATPase CHD1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E YBR111W-A SUS1; Sus1p K11368 ENY2; enhancer of yellow 2 transcription factor
E YMR223W UBP8; ubiquitin-specific protease UBP8 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E YML049C RSE1; U2 snRNP complex subunit RSE1 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E YBR289W SNF5; Snf5p K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D SWI/SNF complex
E YPL016W SWI1; Swi1p K11771 SWI1; SWI/SNF chromatin-remodeling complex subunit SWI1
E YIL126W STH1; RSC chromatin remodeling complex ATPase subunit STH1 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
E YOR290C SNF2; SWI/SNF catalytic subunit SNF2 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
E YBR289W SNF5; Snf5p K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E YJL176C SWI3; Swi3p K11772 SWI3; SWI/SNF complex subunit SWI3
E YHL025W SNF6; Snf6p K11773 SNF6; SWI/SNF complex component SNF6
E YDR073W SNF11; Snf11p K11774 SNF11; SWI/SNF complex component SNF11
E YNR023W SNF12; Snf12p K11775 SNF12; SWI/SNF complex component SWP73
E YFL049W SWP82; Swp82p K11776 SWP82; SWI/SNF complex component SWP82
E YPR034W ARP7; Arp7p K11767 ARP7; actin-related protein 7
E YMR033W ARP9; Arp9p K11768 ARP9; actin-related protein 9
E YPL129W TAF14; TATA-binding protein-associated factor TAF14 K03140 TAF14; transcription initiation factor TFIID/TFIIF subunit
D RSC complex
E YGR056W RSC1; RSC subunit protein RSC1 K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
E YLR357W RSC2; Rsc2p K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
E YDR303C RSC3; Rsc3p K11758 RSC3_30; chromatin structure-remodeling complex subunit RSC3/30
E YHR056C RSC30; Rsc30p K11758 RSC3_30; chromatin structure-remodeling complex subunit RSC3/30
E YKR008W RSC4; Rsc4p K11759 RSC4; chromatin structure-remodeling complex subunit RSC4
E YCR052W RSC6; Rsc6p K11760 RSC6; chromatin structure-remodeling complex subunit RSC6
E YMR091C NPL6; Npl6p K11761 NPL6; chromatin structure-remodeling complex protein RSC7
E YFR037C RSC8; Rsc8p K11762 RSC8; chromatin structure-remodeling complex subunit RSC8
E YML127W RSC9; Rsc9p K11763 RSC9; chromatin structure-remodeling complex subunit RSC9
E YBL006C LDB7; Ldb7p K11764 LDB7; chromatin structure-remodeling complex protein RSC14
E YLR033W RSC58; Rsc58p K11766 RSC58; chromatin structure-remodeling complex subunit RSC58
E YPR034W ARP7; Arp7p K11767 ARP7; actin-related protein 7
E YMR033W ARP9; Arp9p K11768 ARP9; actin-related protein 9
E YCR020W-B HTL1; Htl1p K11769 HTL1; chromatin structure-remodeling complex protein HTL1
E YLR321C SFH1; Sfh1p K11770 SFH1; chromatin structure-remodeling complex subunit SFH1
E YIL126W STH1; RSC chromatin remodeling complex ATPase subunit STH1 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
E YOR290C SNF2; SWI/SNF catalytic subunit SNF2 K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
D Others
E YMR039C SUB1; chromatin-binding transcription coactivator SUB1 K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
C Other transcription-related factors
D Transcription elongation factors
E YGL043W DST1; transcription elongation factor DST1 K03145 TFIIS; transcription elongation factor S-II
E YGR063C SPT4; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E YML010W SPT5; transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
E YGR116W SPT6; chromatin-remodeling histone chaperone SPT6 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E YDR228C PCF11; Pcf11p K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E YDR301W CFT1; cleavage/polyadenylation factor CFT1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E YLR277C YSH1; cleavage polyadenylation factor subunit YSH1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E YOR179C SYC1; cleavage polyadenylation factor subunit SYC1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E YPR107C YTH1; cleavage polyadenylation factor RNA-binding subunit YTH1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E YDR436W PPZ2; salt homeostasis regulator K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E YER133W GLC7; type 1 serine/threonine-protein phosphatase catalytic subunit GLC7 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E YML016C PPZ1; salt homeostasis regulator K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E YPL179W PPQ1; protein-serine/threonine phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E YAL043C PTA1; RNA-processing protein PTA1 K06100 SYMPK; symplekin
E YNL222W SSU72; RNA polymerase II subunit A C-terminal domain phosphatase K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E YOR048C RAT1; ssRNA exonuclease RAT1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E YGL246C RAI1; decapping nuclease K14845 RAI1; RAT1-interacting protein
E YDR289C RTT103; Rtt103p K15559 RTT103; regulator of Ty1 transposition protein 103
E YNL251C NRD1; Nrd1 complex RNA-binding subunit K15560 NRD1; protein NRD1
E YPL190C NAB3; Nab3p K15561 NAB3; nuclear polyadenylated RNA-binding protein 3
E YLR430W SEN1; DNA/RNA helicase SEN1 K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E YJR017C ESS1; peptidylprolyl isomerase ESS1 K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E YBR279W PAF1; Paf1p K15174 PAF1; RNA polymerase II-associated factor 1
E YLR418C CDC73; Cdc73p K15175 CDC73; parafibromin
E YOL145C CTR9; Ctr9p K15176 CTR9; RNA polymerase-associated protein CTR9
E YOR123C LEO1; Leo1p K15177 LEO1; RNA polymerase-associated protein LEO1
E YGL244W RTF1; Rtf1p K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
E YPR161C SGV1; cyclin-dependent serine/threonine protein kinase SGV1 K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
E YLR226W BUR2; Bur2p K15563 BUR2; protein BUR2
D CTDK-I complex
E YKL139W CTK1; cyclin-dependent serine/threonine protein kinase CTK1 K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E YJL006C CTK2; Ctk2p K15564 CTK2; CTD kinase subunit beta
E YML112W CTK3; Ctk3p K15565 CTK3; CTD kinase subunit gamma
D 7SK RNP complex
D DBIRD complex
D Others
E YPL082C MOT1; DNA-binding ATPase K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E YDR397C NCB2; negative cofactor 2 transcription regulator complex subunit NCB2 K21751 DR1; down-regulator of transcription 1
E YER159C BUR6; negative cofactor 2 transcription regulator complex subunit BUR6 K21752 DRAP1; Dr1-associated corepressor
E YER161C SPT2; Spt2p K15193 SPTY2D1; protein SPT2
E YMR277W FCP1; protein serine/threonine phosphatase K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E YLL010C PSR1; phosphatase K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E YLR019W PSR2; putative phosphatase K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E YPR133C SPN1; Spn1p K17498 SPN1; transcription factor SPN1
E YDR527W RBA50; Rba50p K20826 RPAP1; RNA polymerase II-associated protein 1
E YDR066C RTR2; putative protein-serine/threonine phosphatase K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E YER139C RTR1; RNA polymerase II subunit B1 CTD phosphatase RTR1 K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E YCR084C TUP1; chromatin-silencing transcriptional regulator TUP1 K06666 TUP1; general transcriptional corepressor TUP1
E YBR112C CYC8; transcription regulator CYC8 K06665 SSN6; general transcriptional corepressor CYC8
E YMR043W MCM1; transcription factor MCM1 K12412 MCM1; pheromone receptor transcription factor
E YJR072C NPA3; GTPase NPA3 K24104 GPN; GPN-loop GTPase
E YLR243W GPN3; putative signal sequence-binding GTPase GPN3 K24104 GPN; GPN-loop GTPase
E YOR262W GPN2; putative GTPase GPN2 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E YOR116C RPO31; DNA-directed RNA polymerase III core subunit RPO31 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E YOR207C RET1; DNA-directed RNA polymerase III core subunit RET1 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E YPR110C RPC40; DNA-directed RNA polymerase core subunit RPC40 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E YNL113W RPC19; DNA-directed RNA polymerase core subunit RPC19 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E YPR190C RPC82; DNA-directed RNA polymerase III subunit C82 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E YDL150W RPC53; DNA-directed RNA polymerase III subunit C53 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E YKR025W RPC37; DNA-directed RNA polymerase III subunit C37 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E YNR003C RPC34; DNA-directed RNA polymerase III subunit C34 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E YNL151C RPC31; DNA-directed RNA polymerase III subunit C31 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E YKL144C RPC25; DNA-directed RNA polymerase III subunit RPC25 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E YJL011C RPC17; DNA-directed RNA polymerase III subunit RPC17 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E YDR045C RPC11; DNA-directed RNA polymerase III core subunit RPC11 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E YBR154C RPB5; DNA-directed RNA polymerase core subunit RPB5 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E YPR187W RPO26; DNA-directed RNA polymerase core subunit RPO26 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E YOR224C RPB8; DNA-directed RNA polymerase core subunit RPB8 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E YHR143W-A RPC10; DNA-directed RNA polymerase core subunit RPC10 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E YOR210W RPB10; DNA-directed RNA polymerase core subunit RPB10 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E YPR186C PZF1; Pzf1p K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E YER148W SPT15; TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E YGR246C BRF1; transcription factor TFIIIB subunit BRF1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E YNL039W BDP1; transcription factor TFIIIB subunit BDP1 K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E YGR047C TFC4; transcription factor TFIIIC subunit TFC4 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E YBR123C TFC1; transcription factor TFIIIC subunit TFC1 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
D TFIIIC, fungi type
E YBR123C TFC1; transcription factor TFIIIC subunit TFC1 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E YAL001C TFC3; transcription factor TFIIIC subunit TFC3 K15204 TFC3; transcription factor C subunit 3
E YGR047C TFC4; transcription factor TFIIIC subunit TFC4 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E YDR362C TFC6; transcription factor TFIIIC subunit TFC6 K15205 TFC6; transcription factor C subunit 6
E YNL108C HUF; uncharacterized protein K15206 TFC7; transcription factor C subunit 7
E YOR110W TFC7; transcription factor TFIIIC subunit TFC7 K15206 TFC7; transcription factor C subunit 7
E YPL007C TFC8; transcription factor TFIIIC subunit TFC8 K15207 TFC8; transcription factor C subunit 8
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
E YDR005C MAF1; RNA polymerase III-inhibiting protein MAF1 K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E YOR341W RPA190; DNA-directed RNA polymerase I core subunit RPA190 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E YPR010C RPA135; DNA-directed RNA polymerase I core subunit RPA135 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E YPR110C RPC40; DNA-directed RNA polymerase core subunit RPC40 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E YNL113W RPC19; DNA-directed RNA polymerase core subunit RPC19 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E YNL248C RPA49; DNA-directed RNA polymerase I subunit RPA49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E YOR340C RPA43; DNA-directed RNA polymerase I subunit RPA43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E YJL148W RPA34; DNA-directed RNA polymerase I subunit RPA34 K03003 RPA34; DNA-directed RNA polymerase I subunit RPA34
E YJR063W RPA12; DNA-directed RNA polymerase I core subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
E YDR156W RPA14; DNA-directed RNA polymerase I subunit RPA14 K03001 RPA14; DNA-directed RNA polymerase I subunit RPA14
D Pol I, II, III common subunits
E YBR154C RPB5; DNA-directed RNA polymerase core subunit RPB5 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E YPR187W RPO26; DNA-directed RNA polymerase core subunit RPO26 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E YOR224C RPB8; DNA-directed RNA polymerase core subunit RPB8 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E YHR143W-A RPC10; DNA-directed RNA polymerase core subunit RPC10 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E YOR210W RPB10; DNA-directed RNA polymerase core subunit RPB10 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E YER148W SPT15; TATA-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
E YKL125W RRN3; rDNA-binding RNA polymerase I transcriptional factor K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
E YLR141W RRN5; Rrn5p K15217 RRN5; RNA polymerase I-specific transcription initiation factor RRN5
E YBL014C RRN6; Rrn6p K15218 RRN6; RNA polymerase I-specific transcription initiation factor RRN6
E YJL025W RRN7; Rrn7p K15219 RRN7; RNA polymerase I-specific transcription initiation factor RRN7
E YMR270C RRN9; Rrn9p K15220 RRN9; RNA polymerase I-specific transcription initiation factor RRN9
E YBL025W RRN10; Rrn10p K15221 RRN10; RNA polymerase I-specific transcription initiation factor RRN10
E YML043C RRN11; Rrn11p K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11
E YMR233W TRI1; Tri1p K15223 UAF30; upstream activation factor subunit UAF30
E YOR295W UAF30; Uaf30p K15223 UAF30; upstream activation factor subunit UAF30
D Transcription elongation factors
E YGR063C SPT4; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E YML010W SPT5; transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E YBR245C ISW1; chromatin-remodeling ATPase ISW1 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
E YOR304W ISW2; DNA translocase K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
E YKL139W CTK1; cyclin-dependent serine/threonine protein kinase CTK1 K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
E YJL006C CTK2; Ctk2p K15564 CTK2; CTD kinase subunit beta
E YML112W CTK3; Ctk3p K15565 CTK3; CTD kinase subunit gamma
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E YPR086W SUA7; transcription factor TFIIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E YKL028W TFA1; transcription factor TFIIE subunit TFA1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024