+D GENES KO #

  KEGG Orthology (KO) - Salinibacter ruber DSM 13855

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:sru00010] D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] D SRU_0080 tal; putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_2111 Phosphofructokinase subfamily K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D SRU_1856 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1474 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1906 Deoxyribose-phosphate aldolase family K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SRU_1905 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SRU_1200 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_1986 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SRU_1027 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SRU_1138 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D SRU_1971 Pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SRU_1970 pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SRU_1969 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_0811 2-oxo acid dehydrogenases acyltransferase (catalytic domain) protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_0423 pyruvate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D SRU_0424 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D SRU_0681 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1835 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D SRU_2373 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:sru00020] D SRU_0488 citA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D SRU_1477 aconitate hydratase, putative K01681 ACO; aconitate hydratase [EC:4.2.1.3] D SRU_1866 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D SRU_1973 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D SRU_1677 putative (NAD+) isocitrate dehydrogenase ^ K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D SRU_1173 sucA; 2-oxoglutarate dehydrogenase, E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_0423 pyruvate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D SRU_0424 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D SRU_0670 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D SRU_1125 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SRU_0485 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_2444 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_0484 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SRU_0487 putative succinate dehydrogenase membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D SRU_0486 succinate dehydrogenase, membrane subunit, putative K00242 sdhD; succinate dehydrogenase membrane anchor subunit D SRU_1611 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D SRU_1571 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SRU_0828 pycA; pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D SRU_1835 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D SRU_2373 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D SRU_1971 Pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SRU_1970 pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SRU_1969 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_0811 2-oxo acid dehydrogenases acyltransferase (catalytic domain) protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:sru00030] D SRU_0080 tal; putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D SRU_0078 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SRU_0864 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D SRU_0079 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SRU_0007 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SRU_0275 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D SRU_0276 transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2] D SRU_1940 transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2] D SRU_0511 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D SRU_1227 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D SRU_0459 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SRU_0815 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SRU_1550 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D SRU_1906 Deoxyribose-phosphate aldolase family K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SRU_1856 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1474 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_2111 Phosphofructokinase subfamily K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:sru00040] D SRU_0987 possible pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D SRU_2709 probable nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_0596 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_0007 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SRU_0981 putative carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D SRU_0980 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D SRU_1782 aldehyde dehydrogenase (NAD) family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:sru00051] D SRU_1290 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D SRU_2367 pgm; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SRU_0567 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_2111 Phosphofructokinase subfamily K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D SRU_1856 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1474 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_0980 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D SRU_1906 Deoxyribose-phosphate aldolase family K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SRU_1905 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SRU_0838 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D SRU_2748 haloacid dehalogenase-like hydrolase, putative K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:sru00052] D SRU_1285 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D SRU_1772 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_0600 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_2111 Phosphofructokinase subfamily K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D SRU_2019 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D SRU_2017 conserved hypothetical protein K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D SRU_2253 susB; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D SRU_2018 conserved hypothetical protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:sru00053] D SRU_2709 probable nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_0596 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_0618 sugar epimerase BlmG K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] D SRU_0634 NAD dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:sru00500] D SRU_2253 susB; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D SRU_2845 xloA; xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SRU_1929 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D SRU_0791 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D SRU_0846 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SRU_0074 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D SRU_0847 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D SRU_2743 glycosyl hydrolase, family 13 K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D SRU_0362 glycosyl hydrolase, family 13 K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D SRU_0660 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D SRU_0848 alpha amylase family protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D SRU_1930 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D SRU_0849 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D SRU_0659 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D SRU_0568 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D SRU_0569 Trehalose-6-phosphate synthase domain, putative K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] D SRU_0080 tal; putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sru00520] D SRU_2812 chitinase A1 precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D SRU_0372 beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D SRU_0368 chb; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D SRU_2530 glucosamine-6-phosphate isomerase, putative K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D SRU_1363 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SRU_0065 conserved hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D SRU_2425 Uncharacterized protein family (UPF0075) K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D SRU_1325 nucleotidyl transferase, putative K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D SRU_1859 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SRU_2184 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SRU_0602 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D SRU_0608 CMP-N-acetlyneuraminic acid synthetase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] D SRU_2709 probable nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_0596 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_1285 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D SRU_1772 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_0600 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_0634 NAD dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D SRU_0080 tal; putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D SRU_2367 pgm; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SRU_0567 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SRU_1290 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D SRU_0601 perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102] D SRU_0618 sugar epimerase BlmG K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] D SRU_1929 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:sru00620] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_0423 pyruvate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D SRU_0424 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D SRU_1971 Pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SRU_1970 pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SRU_1969 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_0811 2-oxo acid dehydrogenases acyltransferase (catalytic domain) protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_1027 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SRU_2348 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SRU_0936 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SRU_0937 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SRU_1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SRU_2068 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_0681 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SRU_2344 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D SRU_0326 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D SRU_2086 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D SRU_1786 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D SRU_0828 pycA; pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D SRU_1571 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SRU_1611 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D SRU_0093 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D SRU_1835 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D SRU_2373 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D SRU_1138 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_2154 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D SRU_2149 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sru00630] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1571 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SRU_0488 citA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D SRU_1477 aconitate hydratase, putative K01681 ACO; aconitate hydratase [EC:4.2.1.3] D SRU_1866 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_0069 putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D SRU_2246 pccB; putative propionyl-CoA carboxylase beta chain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D SRU_1792 mutA; methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1791 Methylmalonyl-CoA mutase superfamily K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_0653 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D SRU_1636 hydrolase, haloacid dehalogenase-like family K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_0775 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SRU_1257 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D SRU_1617 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_2076 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D SRU_1550 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D SRU_1173 sucA; 2-oxoglutarate dehydrogenase, E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D SRU_1503 Putative cyclase superfamily K07130 kynB; arylformamidase [EC:3.5.1.9] C 00640 Propanoate metabolism [PATH:sru00640] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_0576 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1966 pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_1701 acyl-coenzyme A oxidase I, putative K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D SRU_1372 zinc-binding alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_2348 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SRU_0936 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SRU_0937 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SRU_1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SRU_2246 pccB; putative propionyl-CoA carboxylase beta chain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D SRU_1792 mutA; methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1791 Methylmalonyl-CoA mutase superfamily K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1125 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SRU_0670 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D SRU_0681 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SRU_1614 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:sru00650] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1413 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D SRU_1210 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_0069 putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D SRU_0485 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_2444 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_0484 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SRU_0487 putative succinate dehydrogenase membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D SRU_0486 succinate dehydrogenase, membrane subunit, putative K00242 sdhD; succinate dehydrogenase membrane anchor subunit D SRU_1344 aldehyde dehydrogenase-like protein yneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D SRU_0423 pyruvate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D SRU_0424 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D SRU_2145 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D SRU_2146 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:sru00660] D SRU_2145 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D SRU_2146 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D SRU_1125 succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D SRU_0670 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D SRU_2150 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D SRU_2152 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D SRU_2148 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:sru00562] D SRU_0531 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D SRU_1905 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:sru00190] D SRU_0393 NADH-quinone oxidoreductase chain a K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D SRU_0394 NADH-quinone oxidoreductase chain b K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D SRU_0395 NADH-quinone oxidoreductase chain c/d K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D SRU_0396 nuoD; NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D SRU_0397 NADH-ubiquinone oxidoreductase 24 kda subunit, putative K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D SRU_0398 Respiratory-chain NADH dehydrogenase 51 Kd subunit family K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D SRU_0400 nuoG; NADH dehydrogenase i, g subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D SRU_2784 nuoH; NADH dehydrogenase i, h subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D SRU_0496 nuoI; NADH dehydrogenase i, i subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D SRU_1443 nuoJ; NADH dehydrogenase i, j subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D SRU_1444 nuoK; NADH dehydrogenase i, k subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D SRU_1445 nuoL; NADH dehydrogenase I, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D SRU_1446 nuoM; NADH dehydrogenase i, m subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D SRU_1448 proton-translocating NADH-quinone oxidoreductase, chain N subfamily K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D SRU_2211 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D SRU_0485 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_2444 FAD binding domain protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SRU_0484 sdhB; succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SRU_0487 putative succinate dehydrogenase membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D SRU_0486 succinate dehydrogenase, membrane subunit, putative K00242 sdhD; succinate dehydrogenase membrane anchor subunit D SRU_2369 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D SRU_2097 caa(3)-type oxidase, subunit IV subfamily, putative K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D SRU_2098 conserved hypothetical protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D SRU_0314 coxA2; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D SRU_2099 coxA1; cytochrome oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D SRU_0313 coxB2; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D SRU_2100 coxB1; cytochrome oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA K02259 COX15; heme a synthase [EC:1.17.99.9] D SRU_0322 putative cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D SRU_0323 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D SRU_0915 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D SRU_2429 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D SRU_0916 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D SRU_0914 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D SRU_2430 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D SRU_0911 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D SRU_0913 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SRU_0912 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D SRU_2000 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D SRU_2022 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D SRU_1964 hypothetical protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:sru00680] D SRU_0775 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SRU_1550 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SRU_0093 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D SRU_1571 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SRU_1906 Deoxyribose-phosphate aldolase family K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D SRU_1856 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1474 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_2111 Phosphofructokinase subfamily K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1138 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D SRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_1986 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_2207 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D SRU_0020 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19] D SRU_1618 conserved protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:sru00910] D SRU_0308 nosZ; nitrous oxide reductase precursor K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D SRU_0505 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_2255 glutamate dehydrogenase, short peptide K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_1169 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D SRU_1170 gltD; glutamate synthases, NADH/NADPH, small subunit subfamily K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:sru00920] D SRU_0581 sulfate adenylyltransferase, large subunit subfamily, putative K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D SRU_0580 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D SRU_1326 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D SRU_1005 dhh family/dhha1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D SRU_0422 cysH; phosophoadenylyl-sulfate reductase subfamily K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D SRU_0317 putative filamentous hemagglutinin K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D SRU_0989 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D SRU_0480 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D SRU_1161 cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D SRU_1368 cystathionine beta-lyase MetC K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D SRU_2328 Luciferase-like monooxygenase superfamily K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:sru00061] D SRU_2348 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D SRU_0936 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D SRU_0937 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D SRU_1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D SRU_2754 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D SRU_0043 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SRU_0042 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D SRU_2753 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_2739 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_0736 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0045 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_1153 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0947 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_2681 NAD dependent epimerase/dehydratase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0532 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D SRU_2380 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1209 fadD; putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:sru00071] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1210 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D SRU_1701 acyl-coenzyme A oxidase I, putative K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D SRU_1213 oxidoreductase, acyl-CoA dehydrogenase family K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D SRU_1116 Acyl-CoA dehydrogenase, C-terminal domain family K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_0115 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_2380 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1209 fadD; putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:sru00561] D SRU_1550 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_1614 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D SRU_1471 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D SRU_0041 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D SRU_1480 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D SRU_2301 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SRU_2506 Uncharacterized protein family (UPF0089) K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D SRU_1705 putative secreted lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D SRU_1831 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:sru00564] D SRU_1473 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus family K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D SRU_1481 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus family K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D SRU_1463 glpA; glycerol-3-phosphate dehydrogenase, anaerobic K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D SRU_2437 glpA; anaerobic glycerol-3-phosphate dehydrogenase, subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D SRU_1480 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D SRU_2301 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SRU_0571 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D SRU_1538 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D SRU_1714 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D SRU_0340 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D SRU_0962 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D SRU_0961 phosphatidylserine decarboxylase-like protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D SRU_2173 putative phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D SRU_1301 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:sru00600] D SRU_0368 chb; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:sru00592] D SRU_1701 acyl-coenzyme A oxidase I, putative K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:sru01040] D SRU_1701 acyl-coenzyme A oxidase I, putative K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D SRU_2203 GDSL-like lipase/acylhydrolase domain protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:sru00230] D SRU_2115 hydrolase, NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D SRU_0459 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SRU_0815 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SRU_0897 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D SRU_1862 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D SRU_1638 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D SRU_2656 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D SRU_0963 purS; Phosphoribosylformylglycinamidine (FGAM) synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D SRU_0521 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D SRU_1479 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D SRU_1620 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D SRU_1621 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D SRU_1514 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D SRU_0386 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D SRU_1639 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SRU_1842 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D SRU_1491 protein nagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D SRU_0692 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D SRU_2131 deoD; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D SRU_2231 YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SRU_1710 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D SRU_1496 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SRU_1075 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SRU_1172 rdgB; non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D SRU_2075 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_0975 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_0762 possible Glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_1323 probable cytidine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D SRU_0030 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D SRU_0132 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0300 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0131 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D SRU_1062 spoT; RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D SRU_0822 Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D SRU_1442 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D SRU_1827 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D SRU_1265 Deoxynucleoside kinase subfamily, putative K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D SRU_0673 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D SRU_2375 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D SRU_1875 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SRU_1066 HIT domain protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D SRU_0581 sulfate adenylyltransferase, large subunit subfamily, putative K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D SRU_0580 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:sru00240] D SRU_0960 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D SRU_0959 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D SRU_1334 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D SRU_2198 Amidohydrolase family, putative K01465 URA4; dihydroorotase [EC:3.5.2.3] D SRU_2381 pyrD; dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D SRU_1302 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D SRU_0776 orotate phosphoribosyltransferase, putative K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D SRU_1735 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D SRU_0034 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D SRU_1075 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SRU_0763 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D SRU_0550 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D SRU_1788 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D SRU_0527 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D SRU_1842 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D SRU_1491 protein nagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D SRU_1287 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D SRU_1335 Phosphoribosyl transferase domain, putative K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D SRU_2693 pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D SRU_1163 pyn; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D SRU_1433 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D SRU_0132 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0300 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0131 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D SRU_1265 Deoxynucleoside kinase subfamily, putative K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D SRU_2701 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D SRU_1961 dut; deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SRU_2559 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D SRU_0419 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D SRU_1925 hydrolase, carbon-nitrogen family K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:sru00250] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_1914 FAD binding domain, putative K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D SRU_1709 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D SRU_2761 asg; asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_1296 Asparaginase superfamily K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_0902 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D SRU_2214 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SRU_2221 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SRU_1827 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D SRU_0386 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D SRU_1334 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D SRU_1344 aldehyde dehydrogenase-like protein yneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D SRU_1169 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D SRU_1170 gltD; glutamate synthases, NADH/NADPH, small subunit subfamily K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D SRU_0505 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_2255 glutamate dehydrogenase, short peptide K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_1517 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_0960 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D SRU_0959 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D SRU_0521 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D SRU_1363 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SRU_0897 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:sru00260] D SRU_1745 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0481 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0482 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0691 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0301 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D SRU_1838 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SRU_0690 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D SRU_2377 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D SRU_1423 ybjU; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D SRU_0775 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SRU_1550 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D SRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_1986 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D SRU_2207 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D SRU_0382 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_1257 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D SRU_1617 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_2076 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D SRU_0962 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D SRU_1123 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D SRU_2787 cysteine synthase B K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D SRU_2363 Cys/Met metabolism PLP-dependent enzyme superfamily K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D SRU_1368 cystathionine beta-lyase MetC K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D SRU_2287 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D SRU_1670 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SRU_1669 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:sru00270] D SRU_2363 Cys/Met metabolism PLP-dependent enzyme superfamily K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D SRU_1368 cystathionine beta-lyase MetC K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D SRU_1123 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D SRU_2787 cysteine synthase B K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D SRU_1269 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D SRU_2755 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D SRU_1556 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D SRU_2095 Mta/Sah nucleosidase (P46) [includes: 5'-methylthioadenosine nucleosidase and S-adenosylhomocysteine nucleosidase], putative K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D SRU_2160 mtap; 5'-methylthioadenosine phosphorylase II K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D SRU_2231 YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SRU_0697 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D SRU_1139 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D SRU_1745 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0481 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0482 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0691 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0301 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D SRU_1838 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SRU_0480 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D SRU_1161 cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D SRU_0479 cysD; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D SRU_2317 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_0989 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D SRU_0681 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SRU_1571 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D SRU_2039 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D SRU_2207 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:sru00280] D SRU_2317 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SRU_0576 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1966 pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_2246 pccB; putative propionyl-CoA carboxylase beta chain protein K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D SRU_1792 mutA; methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1791 Methylmalonyl-CoA mutase superfamily K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sru00290] D SRU_2287 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D SRU_2150 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D SRU_2152 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D SRU_2148 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D SRU_2145 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D SRU_2146 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D SRU_2147 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D SRU_2153 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D SRU_2317 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SRU_2154 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D SRU_2149 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:sru00300] D SRU_1745 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0481 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0482 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0691 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0301 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D SRU_1838 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SRU_1080 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SRU_1435 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SRU_1081 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D SRU_0969 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D SRU_2217 aminotransferase, class III superfamily K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D SRU_1415 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D SRU_0556 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SRU_2342 Mur ligase family, glutamate ligase domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:sru00310] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_1116 Acyl-CoA dehydrogenase, C-terminal domain family K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_0115 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1344 aldehyde dehydrogenase-like protein yneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D SRU_2768 FAD dependent oxidoreductase, putative K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D SRU_1133 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D SRU_0542 aminotransferase, class IV superfamily K00824 dat; D-alanine transaminase [EC:2.6.1.21] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:sru00220] D SRU_2218 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9] D SRU_2214 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SRU_2221 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SRU_0666 Amidinotransferase superfamily K01478 arcA; arginine deiminase [EC:3.5.3.6] D SRU_0521 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_0505 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_2255 glutamate dehydrogenase, short peptide K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_2219 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D SRU_1732 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D SRU_2217 aminotransferase, class III superfamily K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D SRU_2220 peptidase, M20A family K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:sru00330] D SRU_0177 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D SRU_0113 putative hydantoinase/oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_0414 Amidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4] D SRU_1373 FAD dependent oxidoreductase, putative K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D SRU_1560 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D SRU_0546 Proline dehydrogenase superfamily K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D SRU_1517 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D SRU_1252 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D SRU_1253 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_0542 aminotransferase, class IV superfamily K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:sru00340] D SRU_0727 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D SRU_0728 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D SRU_1018 phosphoribosyl-AMP cyclohydrolase domain protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D SRU_1564 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D SRU_1561 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D SRU_1565 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D SRU_1559 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SRU_1342 Inositol monophosphatase family K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D SRU_2127 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D SRU_0722 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_2002 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:sru00350] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SRU_1370 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D SRU_2360 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D SRU_1258 L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D SRU_1344 aldehyde dehydrogenase-like protein yneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D SRU_1708 beta-eliminating lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2] D SRU_0717 Phenylalanine and histidine ammonia-lyase K10774 E4.3.1.23; tyrosine ammonia-lyase [EC:4.3.1.23] C 00360 Phenylalanine metabolism [PATH:sru00360] D SRU_2069 tryptophan 5-hydroxylase 1 K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D SRU_1258 L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_1413 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SRU_1370 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D SRU_0542 aminotransferase, class IV superfamily K00824 dat; D-alanine transaminase [EC:2.6.1.21] D SRU_2405 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D SRU_0414 Amidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:sru00380] D SRU_1503 Putative cyclase superfamily K07130 kynB; arylformamidase [EC:3.5.1.9] D SRU_1417 conserved hypothetical protein K01556 KYNU; kynureninase [EC:3.7.1.3] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_1116 Acyl-CoA dehydrogenase, C-terminal domain family K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_0115 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1258 L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D SRU_0427 amine oxidase, flavin-containing K00274 MAO; monoamine oxidase [EC:1.4.3.4] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_0414 Amidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4] D SRU_2405 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sru00400] D SRU_2489 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D SRU_0492 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D SRU_2277 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D SRU_0663 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D SRU_0674 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D SRU_2063 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D SRU_1662 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D SRU_1665 para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D SRU_1666 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D SRU_1668 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D SRU_1667 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D SRU_1670 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SRU_1669 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D SRU_0647 putative chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D SRU_1616 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D SRU_1955 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SRU_2069 tryptophan 5-hydroxylase 1 K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:sru00410] D SRU_1412 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1411 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D SRU_1925 hydrolase, carbon-nitrogen family K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1701 acyl-coenzyme A oxidase I, putative K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] C 00430 Taurine and hypotaurine metabolism [PATH:sru00430] D SRU_0895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_2660 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_0902 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism D SRU_0491 metallo-beta-lactamase superfamily protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:sru00450] D SRU_1161 cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D SRU_1269 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D SRU_2363 Cys/Met metabolism PLP-dependent enzyme superfamily K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D SRU_1384 sufS; cysteine desulfurases, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D SRU_1149 aminotransferase, class V superfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D SRU_2658 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D SRU_0581 sulfate adenylyltransferase, large subunit subfamily, putative K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D SRU_0580 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D SRU_1557 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:sru00460] D SRU_2845 xloA; xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SRU_0895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_2660 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_1709 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D SRU_2761 asg; asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_1296 Asparaginase superfamily K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_0775 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:sru00470] D SRU_0573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SRU_0542 aminotransferase, class IV superfamily K00824 dat; D-alanine transaminase [EC:2.6.1.21] D SRU_2197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_1135 D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_0521 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D SRU_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SRU_1415 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D SRU_0301 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] C 00480 Glutathione metabolism [PATH:sru00480] D SRU_0895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_2660 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_1894 putative metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D SRU_1973 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D SRU_0079 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SRU_0078 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:sru00511] D SRU_0368 chb; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D SRU_2652 aspG; asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] C 00540 Lipopolysaccharide biosynthesis D SRU_0685 Ser/Thr protein phosphatase superfamily K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] C 00542 O-Antigen repeat unit biosynthesis [PATH:sru00542] D SRU_0621 probable glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_0266 putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sru00541] D SRU_1772 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_0600 nucleoside-diphosphate-sugar epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SRU_2709 probable nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_0596 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D SRU_0634 NAD dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D SRU_0589 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D SRU_0588 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0597 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_2708 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0590 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D SRU_0591 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D SRU_1854 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D SRU_1290 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D SRU_2367 pgm; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D SRU_0567 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SRU_0601 perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102] D SRU_0602 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:sru00550] D SRU_1859 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SRU_2184 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SRU_0561 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D SRU_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SRU_0556 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SRU_2197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_1135 D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_2342 Mur ligase family, glutamate ligase domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SRU_1847 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SRU_0337 undecaprenyl-diphosphatase 1 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D SRU_0557 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SRU_0560 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SRU_0686 transglycosylase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D SRU_2384 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D SRU_0555 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SRU_1078 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D SRU_1748 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:sru00552] D SRU_0337 undecaprenyl-diphosphatase 1 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D SRU_0621 probable glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_0266 putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:sru00543] D SRU_0224 putative colanic acid biosynthesis glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D SRU_1003 glycosyl transferase, group 1 family protein, putative K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D SRU_0621 probable glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_0266 putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:sru00730] D SRU_1237 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D SRU_1511 hypothetical protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D SRU_1858 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SRU_1233 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D SRU_1235 thiG; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D SRU_1552 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D SRU_1236 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D SRU_2426 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D SRU_1119 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D SRU_2450 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0238 alkaline phosphatase family protein, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_1875 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SRU_0332 TENA/THI-4 family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:sru00740] D SRU_1510 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D SRU_0012 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D SRU_2302 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D SRU_1068 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D SRU_2303 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D SRU_1775 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D SRU_2115 hydrolase, NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:sru00750] D SRU_0544 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D SRU_1422 Pyridoxamine 5'-phosphate oxidase family K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D SRU_2082 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D SRU_2207 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D SRU_2080 pdxJ; Pyridoxal phosphate biosynthesis protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D SRU_2377 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:sru00760] D SRU_1914 FAD binding domain, putative K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D SRU_1912 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D SRU_1913 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D SRU_0348 pncB; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D SRU_0692 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D SRU_2131 deoD; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D SRU_1842 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D SRU_1491 protein nagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D SRU_2072 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D SRU_0403 NAD(+) synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D SRU_1457 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D SRU_2571 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D SRU_1609 ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D SRU_2206 Alanine dehydrogenase/PNT, N-terminal domain family K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D SRU_2205 conserved hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D SRU_2204 NAD(P) transhydrogenase beta subunit superfamily K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D SRU_1344 aldehyde dehydrogenase-like protein yneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:sru00770] D SRU_2145 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D SRU_2146 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D SRU_2147 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D SRU_2153 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D SRU_1843 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D SRU_1411 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D SRU_0528 putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D SRU_1142 GHMP kinases putative ATP-binding protein K06982 pok; pantoate kinase [EC:2.7.1.169] D SRU_0028 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D SRU_2077 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D SRU_2791 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D SRU_1130 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D SRU_2317 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SRU_1925 hydrolase, carbon-nitrogen family K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D SRU_1412 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:sru00780] D SRU_2753 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_2739 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_0736 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0045 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_1153 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0947 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_2681 NAD dependent epimerase/dehydratase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0532 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D SRU_0517 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D SRU_0756 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D SRU_0529 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:sru00785] D SRU_2551 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D SRU_0796 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D SRU_0239 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_1971 Pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D SRU_1970 pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D SRU_1969 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_0811 2-oxo acid dehydrogenases acyltransferase (catalytic domain) protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D SRU_1173 sucA; 2-oxoglutarate dehydrogenase, E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D SRU_0576 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1966 pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D SRU_1257 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D SRU_1617 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D SRU_2076 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:sru00790] D SRU_2794 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D SRU_2450 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0238 alkaline phosphatase family protein, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_1888 hydrolase, NUDIX family protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D SRU_0761 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D SRU_0955 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D SRU_1947 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D SRU_0412 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SRU_2420 dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D SRU_1510 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D SRU_0012 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D SRU_1685 chorismate binding enzyme K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D SRU_2793 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D SRU_1508 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D SRU_1447 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D SRU_2069 tryptophan 5-hydroxylase 1 K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D SRU_1167 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 00670 One carbon pool by folate [PATH:sru00670] D SRU_0412 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SRU_1839 FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D SRU_0775 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D SRU_1638 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D SRU_1639 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SRU_2171 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SRU_0603 formyltransferase, putative K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SRU_1617 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D SRU_0419 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D SRU_2094 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D SRU_0364 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D SRU_1631 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:sru00860] D SRU_1796 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SRU_1555 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D SRU_1740 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D SRU_1013 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D SRU_1554 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D SRU_1553 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D SRU_1702 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D SRU_1742 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D SRU_0746 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D SRU_1215 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D SRU_1741 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D SRU_2695 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D SRU_2369 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA K02259 COX15; heme a synthase [EC:1.17.99.9] D SRU_1294 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D SRU_2320 Magnesium chelatase, subunit ChlI family K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sru00130] D SRU_0824 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D SRU_1350 putative isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D SRU_1351 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D SRU_1354 menC; o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D SRU_1355 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D SRU_2766 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D SRU_2740 thioesterase family protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D SRU_1353 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D SRU_1625 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D SRU_1370 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:sru00900] D SRU_1849 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D SRU_1652 Uncharacterized protein family UPF0007 K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D SRU_0689 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D SRU_1651 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D SRU_0682 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D SRU_1880 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_2422 Hydroxymethylglutaryl-coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D SRU_1900 idi; isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D SRU_1874 idsA; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SRU_1223 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D SRU_1847 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SRU_0656 caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:sru00906] D SRU_1430 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D SRU_1478 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D SRU_2060 crtI; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D SRU_1501 crtY; licopene beta-cyclase K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:sru00907] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D SRU_0275 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D SRU_1352 cyclase, putative K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:sru00523] D SRU_0589 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D SRU_0588 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0597 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_2708 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0590 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D SRU_0591 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D SRU_1854 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D SRU_1350 putative isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D SRU_0588 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0597 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_2708 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:sru00946] D SRU_2845 xloA; xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D SRU_1683 Penicillin amidase superfamily K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:sru00332] D SRU_1252 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D SRU_1253 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:sru00261] D SRU_0581 sulfate adenylyltransferase, large subunit subfamily, putative K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D SRU_0580 cysD; sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D SRU_1745 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0481 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SRU_0482 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0691 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D SRU_0301 diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4] D SRU_1838 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SRU_1080 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SRU_1435 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SRU_1081 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:sru00521] D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] D SRU_0531 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D SRU_0589 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D SRU_0588 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0597 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_2708 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0590 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D SRU_0591 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D SRU_1854 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D SRU_0785 xylose repressor K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:sru00525] D SRU_0589 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D SRU_0588 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_0597 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SRU_2708 UDP-glucuronate decarboxylase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:sru00401] D SRU_1616 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D SRU_1662 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D SRU_1665 para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D SRU_0043 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SRU_0736 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0045 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_1153 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0947 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_2681 NAD dependent epimerase/dehydratase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0532 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D SRU_2754 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:sru00999] D SRU_2755 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D SRU_2277 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D SRU_2845 xloA; xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:sru00362] D SRU_2682 3-oxoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D SRU_1210 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D SRU_1116 Acyl-CoA dehydrogenase, C-terminal domain family K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_0115 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D SRU_1413 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:sru00627] D SRU_0414 Amidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4] D SRU_2068 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation [PATH:sru00364] D SRU_1703 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:sru00625] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D SRU_1456 probable aldehyde dehydrogenase aldX K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1228 aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D SRU_1260 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sru00361] D SRU_1703 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D SRU_1260 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:sru00623] D SRU_1703 Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:sru00633] D SRU_1687 oxidoreductase, FMN-binding K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D SRU_1460 hadHB; fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D SRU_1211 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:sru00643] D SRU_2360 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D SRU_0414 Amidase, putative K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:sru00930] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_1459 yfcX; fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:sru00626] D SRU_0710 alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:sru03020] D SRU_1758 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SRU_1757 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SRU_1060 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:sru03010] D SRU_1787 ribosomal protein S1, putative K02945 RP-S1; small subunit ribosomal protein S1 D SRU_0036 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SRU_1041 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D SRU_1059 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D SRU_1052 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D SRU_1365 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D SRU_1031 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D SRU_1049 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D SRU_0037 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D SRU_1034 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D SRU_1058 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D SRU_1030 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D SRU_1057 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D SRU_1048 rpS; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D SRU_1774 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D SRU_1629 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D SRU_1044 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D SRU_1366 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SRU_1039 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D SRU_0907 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D SRU_1761 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D SRU_1038 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D SRU_1035 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D SRU_1036 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D SRU_1047 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D SRU_1050 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D SRU_1759 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D SRU_1367 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SRU_1760 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D SRU_1762 ribosomal protein L11, putative K02867 RP-L11; large subunit ribosomal protein L11 D SRU_0038 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D SRU_1045 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D SRU_1053 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D SRU_1042 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D SRU_1061 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D SRU_1051 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D SRU_1626 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D SRU_2805 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D SRU_1420 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D SRU_1040 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D SRU_1037 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D SRU_1046 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D SRU_0814 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SRU_1419 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D SRU_0021 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D SRU_1043 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D SRU_1162 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D SRU_0040 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SRU_0022 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D SRU_0053 rpmH; conserved domain protein K02914 RP-L34; large subunit ribosomal protein L34 D SRU_2804 conserved domain protein K02916 RP-L35; large subunit ribosomal protein L35 D SRU_2691 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SRU_2688 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SRU_2687 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:sru00970] D SRU_2689 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1717 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_0782 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_0949 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_1238 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_2035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D SRU_1897 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D SRU_0025 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D SRU_0816 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SRU_2300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SRU_2675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SRU_1070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SRU_1815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_1836 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_1069 tRNA-His K14226 tRNA-His; tRNA His D SRU_2690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D SRU_2311 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_2033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1989 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1883 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SRU_2310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SRU_0379 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_0856 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_1813 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_1610 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D SRU_2379 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_1522 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_0917 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_2857 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_1543 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_1649 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_1814 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_2472 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_1765 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D SRU_1816 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D SRU_2801 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_0051 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_0500 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_1796 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SRU_0671 Amidase, putative K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SRU_1902 glutamyl-tRNA K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SRU_1282 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SRU_1795 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D SRU_1544 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SRU_1963 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SRU_1832 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SRU_2334 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SRU_2802 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SRU_1855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SRU_1014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SRU_1557 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SRU_2171 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SRU_0603 formyltransferase, putative K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SRU_2044 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SRU_0933 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SRU_0456 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SRU_0905 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SRU_0986 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SRU_2541 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SRU_0839 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SRU_2806 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SRU_2807 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SRU_1623 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SRU_1664 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:sru03060] D SRU_1054 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D SRU_1764 preprotein translocase, SecE subunit, putative K03073 secE; preprotein translocase subunit SecE D SRU_2114 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D SRU_1828 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D SRU_1829 secD; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D SRU_0011 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D SRU_0055 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D SRU_0801 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SRU_1630 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SRU_2172 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D SRU_2421 arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D SRU_0672 putative sec-independent protein transporter K03116 tatA; sec-independent protein translocase protein TatA D SRU_0777 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D SRU_0407 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D SRU_0404 lspA; signal peptidase (SPase) II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:sru04122] D SRU_1858 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SRU_0989 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D SRU_2494 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D SRU_2041 ThiS family, putative K03636 moaD; sulfur-carrier protein D SRU_0931 putative thiosulfate sulfurtransferase, putative K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D SRU_2042 MoeZ/MoeB domain family K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D SRU_1167 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D SRU_1234 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:sru03018] D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SRU_1773 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SRU_1528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D SRU_0046 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13] D SRU_1673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_0299 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_2234 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D SRU_2340 transcription termination factor rho K03628 rho; transcription termination factor Rho D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_1300 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D SRU_2122 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_0237 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_2436 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:sru03030] D SRU_1441 exonuclease family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0950 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0715 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0979 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SRU_2557 DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SRU_0857 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SRU_0498 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SRU_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SRU_0026 putative replicative DNA helicase, intein-containing K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SRU_0970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_1185 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SRU_1109 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SRU_2372 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SRU_1995 putative DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] C 03410 Base excision repair [PATH:sru03410] D SRU_2356 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SRU_2119 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SRU_1545 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D SRU_0462 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D SRU_0027 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_2233 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:sru03420] D SRU_0063 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SRU_0449 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D SRU_2387 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D SRU_1160 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D SRU_1580 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D SRU_0718 probable ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0513 uvrd; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0538 ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_2315 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:sru03430] D SRU_1606 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D SRU_0652 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D SRU_1712 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D SRU_0718 probable ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0513 uvrd; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0538 ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_2315 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0738 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SRU_0735 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SRU_2233 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0979 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SRU_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SRU_2557 DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SRU_0498 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SRU_0857 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SRU_1441 exonuclease family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0950 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0715 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:sru03440] D SRU_2233 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0067 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D SRU_1176 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D SRU_2555 recR; recombination protein RecR K06187 recR; recombination protein RecR D SRU_1531 recA; recA protein K03553 recA; recombination protein RecA D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_0458 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D SRU_1146 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SRU_2668 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SRU_0269 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D SRU_0979 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SRU_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SRU_2557 DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SRU_0498 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SRU_0857 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SRU_1441 exonuclease family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0950 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0715 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_2745 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:sru02010] D SRU_2400 Bacterial extracellular solute-binding protein, putative K02012 afuA; iron(III) transport system substrate-binding protein D SRU_2399 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D SRU_2398 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D SRU_0434 glycine betaine ABC transporter glycine betaine-binding protein, putative K02002 proX; glycine betaine/proline transport system substrate-binding protein D SRU_0433 ABC transporter, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D SRU_0432 glycine betaine/L-proline transport system permease protein proW K02001 proW; glycine betaine/proline transport system permease protein D SRU_0431 proV; glycine betaine/L-proline transport ATP binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D SRU_2474 transmembrane protein K05845 opuC; osmoprotectant transport system substrate-binding protein D SRU_2473 ABC transporter, ATP-binding protein, putative K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D SRU_2750 putative periplasmic efflux protein K07323 mlaC; phospholipid transport system substrate-binding protein D SRU_2503 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D SRU_0342 paraquant-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D SRU_0344 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D SRU_2501 domain of unknown function superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D SRU_2502 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D SRU_0343 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D SRU_1465 sugar ABC transporter, periplasmic sugar-binding protein K17321 glpV; glycerol transport system substrate-binding protein D SRU_1468 ABC transporter, permease protein K17322 glpP; glycerol transport system permease protein D SRU_1467 sugar ABC transporter, permease protein K17323 glpQ; glycerol transport system permease protein D SRU_1470 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D SRU_1469 ABC transporter, ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D SRU_2293 pstS; phosphate ABC transporter, phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D SRU_2294 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D SRU_2295 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D SRU_2296 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D SRU_0729 bioY family protein K03523 bioY; biotin transport system substrate-specific component D SRU_0019 membrane protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein D SRU_1516 putative permease domain protein K09808 lolC_E; lipoprotein-releasing system permease protein D SRU_1203 lipoprotein-releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D SRU_2189 heme exporter protein C, putative K02195 ccmC; heme exporter protein C D SRU_2188 heme exporter, protein B, putative K02194 ccmB; heme exporter protein B D SRU_0792 lipoprotein-releasing system ATP-binding protein lolD K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D SRU_2087 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein D SRU_1124 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein D SRU_1362 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D SRU_0294 ABC transporter, nucleotide binding/ATPase protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D SRU_0311 NosF protein K19340 nosF; Cu-processing system ATP-binding protein D SRU_1954 cell division ABC transporter, permease protein FtsX, putative K09811 ftsX; cell division transport system permease protein D SRU_1007 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SRU_2836 ABC transporter, ATP binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D SRU_2165 ABC transporter, ATP-binding protein, MDR family K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D SRU_2163 ABC transporter, ATP-binding protein, MsbA family K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:sru02060] D SRU_1872 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D SRU_1873 HPr-like protein crh K02784 ptsH; phosphocarrier protein HPr D SRU_0838 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] C 03070 Bacterial secretion system [PATH:sru03070] D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_1280 general (Type II) secretion pathway (GSP) D protein, putative K02453 gspD; general secretion pathway protein D D SRU_1829 secD; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D SRU_1828 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D SRU_1764 preprotein translocase, SecE subunit, putative K03073 secE; preprotein translocase subunit SecE D SRU_2114 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D SRU_1054 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D SRU_0011 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D SRU_0055 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D SRU_0801 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SRU_2172 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D SRU_1630 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SRU_0672 putative sec-independent protein transporter K03116 tatA; sec-independent protein translocase protein TatA D SRU_0777 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:sru02020] D SRU_0865 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D SRU_2292 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2488 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2491 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2450 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0238 alkaline phosphatase family protein, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_2790 response regulator receiver:histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SRU_2293 pstS; phosphate ABC transporter, phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D SRU_1612 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SRU_2631 phase 1 flagellin K02406 fliC; flagellin D SRU_2630 flagellin K02406 fliC; flagellin D SRU_2581 RNA polymerase sigma-28 factor K02405 fliA; RNA polymerase sigma factor FliA D SRU_2594 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D SRU_0836 response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA K02259 COX15; heme a synthase [EC:1.17.99.9] D SRU_1369 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0096 TonB-dependent receptor domain protein K19611 fepA; ferric enterobactin receptor D SRU_0472 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_2048 putative two-component system sensory/regulatory protein, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_1786 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D SRU_0259 Histidine kinase family K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D SRU_2827 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1147 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SRU_2605 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D SRU_0336 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D SRU_2597 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D SRU_2595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_0141 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 mcp; methyl-accepting chemotaxis protein D SRU_2599 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_2606 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D SRU_2602 cheA; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D SRU_2604 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D SRU_2601 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D SRU_0854 mutant NtrC-like activator K11443 divK; two-component system, cell cycle response regulator DivK D SRU_1122 FixL-related histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D SRU_2623 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC D SRU_2166 transcription regulator, Crp family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SRU_0322 putative cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D SRU_0323 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0739 Low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D SRU_0602 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D SRU_2249 RNA polymerase ECF-type sigma factor, putative K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D SRU_0175 putative anti-sigma factor K07165 fecR; transmembrane sensor D SRU_2137 sigma factor regulatory protein, FecR/PupR family K07165 fecR; transmembrane sensor D SRU_2250 putative transmembrane sensor K07165 fecR; transmembrane sensor D SRU_2427 probable sensor/response hybrid, putative K20976 hptB; histidine phosphotransfer protein HptB C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:sru02024] D SRU_1662 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D SRU_1665 para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D SRU_2489 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D SRU_2380 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1209 fadD; putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_2166 transcription regulator, Crp family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SRU_1510 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D SRU_2302 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D SRU_0476 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D SRU_2019 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D SRU_0055 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D SRU_1829 secD; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D SRU_1764 preprotein translocase, SecE subunit, putative K03073 secE; preprotein translocase subunit SecE D SRU_2114 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D SRU_1054 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D SRU_0011 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D SRU_0801 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SRU_2172 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D SRU_1630 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:sru02030] D SRU_2597 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D SRU_2595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_0141 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 mcp; methyl-accepting chemotaxis protein D SRU_2599 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_2602 cheA; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D SRU_2606 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D SRU_2604 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D SRU_2601 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D SRU_0336 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D SRU_2605 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D SRU_2616 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D SRU_2591 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D SRU_2590 possible flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D SRU_2594 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D SRU_2593 probable chemotaxis protein K02557 motB; chemotaxis protein MotB D SRU_2237 OmpA domain protein, putative K02557 motB; chemotaxis protein MotB D SRU_2697 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:sru02040] D SRU_2618 fliE; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D SRU_2617 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D SRU_2616 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D SRU_2615 hypothetical protein K02411 fliH; flagellar assembly protein FliH D SRU_2614 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SRU_2613 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D SRU_2592 fliL; Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D SRU_2591 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D SRU_2590 possible flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D SRU_2589 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D SRU_2588 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D SRU_2587 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D SRU_2586 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D SRU_2584 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D SRU_2585 flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D SRU_2642 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D SRU_2621 Flagella basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB D SRU_2620 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D SRU_2609 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D SRU_2607 flagellar biosynthesis cell-distal portion of basal-body rod K02390 flgE; flagellar hook protein FlgE D SRU_2644 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D SRU_2643 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D SRU_2641 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D SRU_2640 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D SRU_2639 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D SRU_2637 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D SRU_2636 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D SRU_2631 phase 1 flagellin K02406 fliC; flagellin D SRU_2630 flagellin K02406 fliC; flagellin D SRU_2626 Flagellar hook-associated protein 2 C-terminus K02407 fliD; flagellar hook-associated protein 2 D SRU_2627 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D SRU_2594 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D SRU_2593 probable chemotaxis protein K02557 motB; chemotaxis protein MotB D SRU_2237 OmpA domain protein, putative K02557 motB; chemotaxis protein MotB D SRU_2697 OmpA family protein K02557 motB; chemotaxis protein MotB D SRU_1949 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D SRU_1147 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SRU_2623 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC D SRU_2581 RNA polymerase sigma-28 factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:sru04980] D SRU_1294 ATP:cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D SRU_1793 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D SRU_1792 mutA; methylmalonyl-CoA mutase, beta subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D SRU_1791 Methylmalonyl-CoA mutase superfamily K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:sru01501] D SRU_0372 beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D SRU_1192 TonB family C-terminal domain protein K02172 blaR1; bla regulator protein blaR1 D SRU_0298 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_1193 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_0724 putative HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D SRU_0725 multidrug resistance protein, putative K18138 acrB; multidrug efflux pump D SRU_0476 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0686 transglycosylase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D SRU_2384 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D SRU_0555 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:sru01502] D SRU_2197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_1135 D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_0573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SRU_2342 Mur ligase family, glutamate ligase domain protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SRU_0557 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SRU_0560 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sru01503] D SRU_2497 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SRU_1612 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SRU_0724 putative HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D SRU_0725 multidrug resistance protein, putative K18138 acrB; multidrug efflux pump D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:sru01000] C 01001 Protein kinases [BR:sru01001] D SRU_1455 protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SRU_2692 PASTA domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SRU_1358 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D SRU_0865 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D SRU_2790 response regulator receiver:histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SRU_0836 response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D SRU_0129 putative light- and oxygen-sensing transcription regulator K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D SRU_0472 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_2048 putative two-component system sensory/regulatory protein, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_0259 Histidine kinase family K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D SRU_2326 two-component signal transduction histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D SRU_2856 probable transmembrane sensor histidine kinase transcription regulator protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D SRU_2602 cheA; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D SRU_1122 FixL-related histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:sru01009] D SRU_1139 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D SRU_2259 Na-K-Cl cotransporter, putative K10951 SLC12A2; solute carrier family 12 (sodium/potassium/chloride transporter), member 2 D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:sru01002] D SRU_0404 lspA; signal peptidase (SPase) II K03101 lspA; signal peptidase II [EC:3.4.23.36] D SRU_2075 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_0975 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_0762 possible Glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SRU_0972 glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase D SRU_0897 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D SRU_1169 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D SRU_1363 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SRU_1723 protease I K05520 yhbO; deglycase [EC:3.5.1.124] D SRU_0428 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124] D SRU_0148 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D SRU_0248 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D SRU_2481 transcriptional regulator, AbrB family K07052 K07052; CAAX protease family protein D SRU_1716 membrane protein, putative K07052 K07052; CAAX protease family protein D SRU_1894 putative metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D SRU_1312 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D SRU_1634 protease, putative K07263 pqqL; zinc protease [EC:3.4.24.-] D SRU_1245 ymxG; processing protease K07263 pqqL; zinc protease [EC:3.4.24.-] D SRU_0920 Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D SRU_0391 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D SRU_0454 carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D SRU_1749 peptidase, M20/M25/M40 family K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D SRU_1055 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D SRU_1497 aminopeptidase P, putative K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D SRU_1805 pepP; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D SRU_0049 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D SRU_2485 carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D SRU_1029 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SRU_1819 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SRU_0656 caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D SRU_0106 putative peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D SRU_1848 membrane-associated zinc metalloprotease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D SRU_1192 TonB family C-terminal domain protein K02172 blaR1; bla regulator protein blaR1 D SRU_1418 Protein of unknown function (DUF980) superfamily K09933 mtfA; MtfA peptidase D SRU_1933 Peptidase family T4 K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D SRU_1612 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SRU_1622 lysyl endopeptidase precursor K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D SRU_1401 subtilisin-like serine proteases K17734 aprX; serine protease AprX [EC:3.4.21.-] D SRU_0572 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D SRU_1078 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D SRU_1748 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D SRU_2674 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SRU_1439 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SRU_0551 LexA repressor, putative K01356 lexA; repressor LexA [EC:3.4.21.88] D SRU_1177 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D SRU_0304 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D SRU_0407 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D SRU_1831 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D SRU_0779 prc; carboxy-terminal peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D SRU_1943 ctp; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D SRU_2235 MdsD protein, putative K08676 tri; tricorn protease [EC:3.4.21.-] D SRU_1683 Penicillin amidase superfamily K01434 pac; penicillin G amidase [EC:3.5.1.11] D SRU_2354 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D SRU_0684 cytoplasmic membrane protein K07059 K07059; rhomboid family protein D SRU_0683 peptidase, S54 (rhomboid) family, putative K07059 K07059; rhomboid family protein D SRU_1425 LD-carboxypeptidase family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D SRU_1642 heat shock protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D SRU_2761 asg; asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_1296 Asparaginase superfamily K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D SRU_0895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D SRU_2660 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:sru01003] D SRU_1972 glycosyl transferase, group 2 family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D SRU_0281 glycosyl transferase, group 1 family protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D SRU_0444 glycosyl transferase, group 1 family protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D SRU_0445 putative sulfolipid synthase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D SRU_0791 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D SRU_1930 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D SRU_0686 transglycosylase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D SRU_0621 probable glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_0266 putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_1499 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D SRU_0569 Trehalose-6-phosphate synthase domain, putative K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D SRU_1003 glycosyl transferase, group 1 family protein, putative K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:sru01005] D SRU_0685 Ser/Thr protein phosphatase superfamily K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D SRU_0621 probable glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SRU_0266 putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sru01011] D SRU_1859 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SRU_2184 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SRU_0561 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D SRU_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SRU_0556 murE; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D SRU_2197 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_1135 D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SRU_0573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SRU_1425 LD-carboxypeptidase family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D SRU_0557 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SRU_0560 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SRU_0337 undecaprenyl-diphosphatase 1 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D SRU_0494 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D SRU_0686 transglycosylase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D SRU_2384 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D SRU_0555 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SRU_1078 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D SRU_1748 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D SRU_0291 peptidoglycan N-acetylmuramoylhydrolase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D SRU_2544 Uncharacterized BCR, YceG family COG1559 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D SRU_2140 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D SRU_1298 spoIID; sporulation protein SpoIID K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D SRU_2497 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:sru01004] D SRU_0043 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D SRU_0042 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D SRU_2753 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_2739 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D SRU_0736 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0045 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_1153 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0947 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_2681 NAD dependent epimerase/dehydratase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D SRU_0532 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D SRU_2203 GDSL-like lipase/acylhydrolase domain protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D SRU_1684 acs; acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_1820 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D SRU_2380 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1209 fadD; putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_0041 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D SRU_1480 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D SRU_2301 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:sru01008] D SRU_1352 cyclase, putative K05555 actIV; cyclase [EC:4.-.-.-] C 01006 Prenyltransferases [BR:sru01006] D SRU_1874 idsA; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SRU_1223 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D SRU_1847 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SRU_1430 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D SRU_1478 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D SRU_1498 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SRU_1353 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D SRU_2369 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:sru01007] D SRU_1796 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SRU_1795 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D SRU_1623 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SRU_1664 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SRU_1014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SRU_0986 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SRU_1557 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SRU_0456 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SRU_2044 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SRU_0933 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SRU_0905 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SRU_1963 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SRU_1832 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SRU_0839 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SRU_2334 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SRU_1855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SRU_2541 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SRU_2802 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SRU_1544 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SRU_2806 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SRU_2807 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SRU_0938 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SRU_1324 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D SRU_1781 aspB; aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D SRU_2128 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SRU_0382 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D SRU_0517 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D SRU_0799 aminotransferase, class III superfamily K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36] D SRU_2217 aminotransferase, class III superfamily K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D SRU_1740 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D SRU_0542 aminotransferase, class IV superfamily K00824 dat; D-alanine transaminase [EC:2.6.1.21] D SRU_2317 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SRU_1685 chorismate binding enzyme K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D SRU_2207 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D SRU_0601 perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:sru00194] D SRU_2430 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D SRU_2429 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D SRU_0916 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D SRU_0915 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D SRU_0914 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D SRU_0913 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SRU_0912 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D SRU_0911 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:sru03000] D SRU_1472 transcriptional regulator, putative K07506 K07506; AraC family transcriptional regulator D SRU_2406 oxyR; redox-sensitive transcriptional activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D SRU_1512 HTH-type transcriptional regulator celR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SRU_2839 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SRU_0369 rbsR; ribose operon repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D SRU_0316 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D SRU_1519 transcriptional regulator, GntR family protein K07978 plmA; GntR family transcriptional regulator D SRU_0477 transcriptional regulator, TetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D SRU_2773 probable transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D SRU_2286 transcriptional regulator, TetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D SRU_0082 HTH-type transcriptional repressor Bm3R1, putative K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D SRU_0928 TetR family transcriptional regulator, putative K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D SRU_0384 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SRU_1283 transcriptional regulator, putative K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D SRU_2702 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D SRU_2166 transcription regulator, Crp family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SRU_0748 rrf2 family protein (putative transcriptional regulator) K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D SRU_0112 transcriptional regulator, ArsR family protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D SRU_2045 iron dependent repressor, putative K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D SRU_0298 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_1193 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_0529 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SRU_0350 hypothetical protein K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D SRU_0088 Pyridine nucleotide-disulphide oxidoreductase domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D SRU_0008 Uncharacterized BCR, COG1937 family K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D SRU_0515 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SRU_0630 putative transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH D SRU_2353 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D SRU_0332 TENA/THI-4 family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D SRU_1632 PspC domain family K03973 pspC; phage shock protein C D SRU_1335 Phosphoribosyl transferase domain, putative K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D SRU_2693 pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D SRU_0495 conserved hypothetical protein K07735 algH; putative transcriptional regulator D SRU_0457 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D SRU_0552 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:sru03021] D SRU_1941 Ysh1p: subunit of polyadenylation factor I, putative K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D SRU_1060 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SRU_1758 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SRU_1757 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SRU_1949 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D SRU_1934 RNA polymerase sigma-H factor, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D SRU_2525 rfaY; RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D SRU_2249 RNA polymerase ECF-type sigma factor, putative K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D SRU_1147 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D SRU_2581 RNA polymerase sigma-28 factor K02405 fliA; RNA polymerase sigma factor FliA D SRU_1778 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D SRU_0015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D SRU_1763 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D SRU_1357 transcriptional regulator, putative K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D SRU_1359 anti-sigma B factor antagonist, putative K04749 rsbV; anti-sigma B factor antagonist D SRU_1358 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D SRU_0457 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D SRU_1424 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D SRU_2234 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D SRU_2340 transcription termination factor rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:sru03019] D SRU_1941 Ysh1p: subunit of polyadenylation factor I, putative K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D SRU_0489 ribonuclease, Rne/Rng family subfamily K08301 rng; ribonuclease G [EC:3.1.26.-] D SRU_1343 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SRU_1528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D SRU_0046 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13] D SRU_1673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_0299 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SRU_1773 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SRU_2234 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D SRU_2340 transcription termination factor rho K03628 rho; transcription termination factor Rho D SRU_0825 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D SRU_1300 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D SRU_2122 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_0237 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_2436 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:sru03011] D SRU_1787 ribosomal protein S1, putative K02945 RP-S1; small subunit ribosomal protein S1 D SRU_0036 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SRU_1041 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D SRU_1059 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D SRU_1052 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D SRU_1365 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D SRU_1031 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D SRU_1049 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D SRU_0037 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D SRU_1034 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D SRU_1058 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D SRU_1030 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D SRU_1057 rpsM; ribosomal protein S13p/S18e K02952 RP-S13; small subunit ribosomal protein S13 D SRU_1048 rpS; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D SRU_1774 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D SRU_1629 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D SRU_1044 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D SRU_1366 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SRU_1039 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D SRU_0907 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D SRU_1761 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D SRU_1038 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D SRU_1035 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D SRU_1036 rplD; ribosomal protein L4/L1 family K02926 RP-L4; large subunit ribosomal protein L4 D SRU_1047 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D SRU_1050 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D SRU_1367 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SRU_1760 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D SRU_1762 ribosomal protein L11, putative K02867 RP-L11; large subunit ribosomal protein L11 D SRU_1759 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D SRU_0038 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D SRU_1045 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D SRU_1053 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D SRU_1042 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D SRU_1061 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D SRU_1051 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D SRU_1626 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D SRU_2805 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D SRU_1420 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D SRU_1040 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D SRU_1037 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D SRU_1046 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D SRU_1419 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D SRU_0021 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D SRU_1043 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D SRU_1162 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D SRU_0040 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SRU_0022 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D SRU_0053 rpmH; conserved domain protein K02914 RP-L34; large subunit ribosomal protein L34 D SRU_2804 conserved domain protein K02916 RP-L35; large subunit ribosomal protein L35 D SRU_0814 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SRU_2687 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SRU_2691 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SRU_2688 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:sru03009] D SRU_1343 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SRU_2081 era; GTP-binding protein Era K03595 era; GTPase D SRU_1186 GTPase of unknown function subfamily, putative K03979 obgE; GTPase [EC:3.6.5.-] D SRU_0457 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D SRU_1778 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D SRU_0015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D SRU_1763 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D SRU_2194 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SRU_0884 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SRU_2078 conserved hypothetical protein TIGR00095 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SRU_2116 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SRU_0061 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SRU_0553 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SRU_2088 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SRU_1461 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SRU_2126 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SRU_1743 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D SRU_1495 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SRU_1189 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SRU_1628 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D SRU_0823 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D SRU_0770 Cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D SRU_0489 ribonuclease, Rne/Rng family subfamily K08301 rng; ribonuclease G [EC:3.1.26.-] D SRU_1064 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D SRU_0046 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13] D SRU_1119 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D SRU_0339 GTP-binding protein, Era/ThdF family K03977 engA; GTPase D SRU_2412 GTPase of unknown function subfamily, putative K03665 hflX; GTPase D SRU_1597 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SRU_1062 spoT; RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D SRU_1776 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D SRU_1779 Uncharacterized BCR, YhbC family COG0779 K09748 rimP; ribosome maturation factor RimP D SRU_2548 Domain of unknown function DUF143 family K09710 ybeB; ribosome-associated protein D SRU_2092 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor D SRU_1340 CRS1 / YhbY domain superfamily K07574 yhbY; RNA-binding protein D SRU_2093 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D SRU_0017 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D SRU_0039 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:sru03016] D SRU_2164 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D SRU_1222 metallo-beta-lactamase superfamily, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11] D SRU_1796 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SRU_2541 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SRU_0456 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SRU_0933 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SRU_1557 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SRU_1795 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D SRU_0986 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SRU_0905 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SRU_1963 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SRU_1544 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SRU_1832 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SRU_2334 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SRU_2802 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SRU_1855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SRU_1014 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SRU_2044 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SRU_0839 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SRU_2806 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SRU_2807 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SRU_1623 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SRU_1664 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SRU_1171 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D SRU_1141 alanyl-tRNA synthetase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D SRU_2792 hypothetical HIT-like protein slr1234 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SRU_0664 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D SRU_1858 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SRU_1597 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SRU_1498 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SRU_0056 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D SRU_0060 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SRU_1326 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D SRU_0054 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D SRU_1568 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D SRU_2518 putative cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D SRU_2519 NifR3 family enzyme K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D SRU_2575 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D SRU_2734 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D SRU_1627 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D SRU_0882 rRNA methylase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D SRU_2820 THUMP domain/methyltransferase domain protein K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D SRU_0504 putative RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D SRU_1743 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D SRU_2494 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D SRU_1388 hesB family protein K13628 iscA; iron-sulfur cluster assembly protein D SRU_1318 iron-sulfur cluster assembly accessory protein, putative K13628 iscA; iron-sulfur cluster assembly protein D SRU_1653 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D SRU_2793 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D SRU_1508 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D SRU_1711 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D SRU_1154 glycoprotease (M22) metalloprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D SRU_2545 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D SRU_2419 Uncharacterized P-loop hydrolase UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D SRU_1528 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D SRU_1773 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:sru03012] D SRU_1777 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D SRU_2803 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D SRU_2810 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D SRU_0035 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D SRU_1766 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_1033 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_1032 fusA; translation elongation factor G K02355 fusA; elongation factor G D SRU_1150 fus; elongation factor G K02355 fusA; elongation factor G D SRU_1364 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D SRU_0033 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D SRU_2066 hemK; hemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D SRU_0813 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D SRU_1056 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D SRU_0935 efp; translation elongation factor P K02356 efp; elongation factor P D SRU_1780 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D SRU_1658 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:sru03110] D SRU_2833 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D SRU_1317 clpC; ATP-dependent Clp protease, ATPase subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D SRU_1644 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D SRU_1300 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D SRU_2122 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_0237 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_2351 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D SRU_0467 dnaJ; dnaJ protein K03686 dnaJ; molecular chaperone DnaJ D SRU_2352 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D SRU_2359 hsp; heat shock protein, class I K13993 HSP20; HSP20 family protein D SRU_1956 heat shock protein, family K13993 HSP20; HSP20 family protein D SRU_2331 hsp; heat shock protein, class I K13993 HSP20; HSP20 family protein D SRU_2121 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES D SRU_0862 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES D SRU_1612 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D SRU_1029 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SRU_1819 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SRU_0911 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D SRU_0368 chb; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D SRU_0478 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D SRU_1416 peptidylprolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D SRU_2208 peptidyl-prolyl cis-trans isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D SRU_2676 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D SRU_1797 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D SRU_1799 peptidylprolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D SRU_2657 trx; thioredoxin K03671 TXN; thioredoxin D SRU_2157 thioredoxin K05838 ybbN; putative thioredoxin D SRU_0156 thiol:disulfide interchange protein tlpA, putative K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:sru04131] D SRU_1075 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D SRU_0270 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D SRU_2421 arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D SRU_1200 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SRU_1027 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:sru04121] C 03051 Proteasome C 03032 DNA replication proteins [BR:sru03032] D SRU_1185 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SRU_1109 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SRU_1377 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SRU_1063 hup; probable DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D SRU_1369 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0026 putative replicative DNA helicase, intein-containing K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SRU_0970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0979 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SRU_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SRU_0498 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SRU_0857 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SRU_1441 exonuclease family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0950 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0715 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_2557 DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SRU_2372 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SRU_1995 putative DNA polymerase II K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D SRU_2199 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SRU_1483 type II DNA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SRU_2408 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SRU_1484 type II DNA topoisomerase, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SRU_1118 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:sru03036] D SRU_1343 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SRU_1377 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SRU_1063 hup; probable DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D SRU_1369 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SRU_0329 general stress protein 20U K04047 dps; starvation-inducible DNA-binding protein D SRU_1117 starvation induced DNA binding protein K04047 dps; starvation-inducible DNA-binding protein D SRU_0384 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SRU_0890 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D SRU_1770 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A D SRU_1494 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D SRU_0563 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D SRU_0786 Septum formation initiator superfamily K05589 ftsB; cell division protein FtsB D SRU_1007 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SRU_0555 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SRU_1619 ftsK; ftsk/spoiiie family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SRU_0562 ftsQ protein, putative K03589 ftsQ; cell division protein FtsQ D SRU_0559 cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW D SRU_1954 cell division ABC transporter, permease protein FtsX, putative K09811 ftsX; cell division transport system permease protein D SRU_0564 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SRU_2809 conserved hypothetical protein K09888 zapA; cell division protein ZapA D SRU_0464 putative ATPase K06916 zapE; cell division protein ZapE D SRU_2497 N-acetylmuramoyl-L-alanine amidase-like protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SRU_0724 putative HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D SRU_1640 regulator of ftsI, penicillin binding protein 3, septation function K03569 mreB; rod shape-determining protein MreB and related proteins D SRU_1641 cell shape-determining protein MreC, putative K03570 mreC; rod shape-determining protein MreC D SRU_2385 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D SRU_0514 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein D SRU_p0029 parA; plasmid partition protein K03496 parA; chromosome partitioning protein D SRU_0764 Soj family protein K03496 parA; chromosome partitioning protein D SRU_0953 ParA family protein K03496 parA; chromosome partitioning protein D SRU_2029 conserved hypothetical protein K03496 parA; chromosome partitioning protein D SRU_0515 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SRU_1484 type II DNA topoisomerase, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SRU_0060 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SRU_0061 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SRU_0803 site-specific recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC D SRU_p0011 site-specific recombinase, phage integrase family, truncation K04763 xerD; integrase/recombinase XerD D SRU_1505 Phage integrase, N-terminal SAM-like domain protein K04763 xerD; integrase/recombinase XerD D SRU_1506 tyrosine recombinase xerC K04763 xerD; integrase/recombinase XerD D SRU_0821 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:sru03400] D SRU_2330 deoxyribodipyrimidine photolyase, putative K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D SRU_1083 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D SRU_1754 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D SRU_1545 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D SRU_2119 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SRU_2356 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SRU_0781 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SRU_1961 dut; deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SRU_2038 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D SRU_0027 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D SRU_0462 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D SRU_2800 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D SRU_2233 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D SRU_0888 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SRU_1635 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D SRU_0449 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D SRU_2387 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D SRU_1160 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D SRU_1580 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D SRU_0718 probable ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0513 uvrd; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_0538 ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_2315 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SRU_1758 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SRU_1757 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SRU_1060 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SRU_0063 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SRU_1606 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D SRU_0652 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D SRU_1712 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D SRU_0738 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SRU_0735 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SRU_0979 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SRU_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SRU_0498 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SRU_0857 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SRU_1441 exonuclease family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0950 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_0715 exonuclease, putative K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SRU_2557 DNA polymerase III, subunits gamma and tau, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_1531 recA; recA protein K03553 recA; recombination protein RecA D SRU_0458 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D SRU_1146 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SRU_2668 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SRU_2745 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D SRU_1868 exonuclease SbcC, putative K03546 sbcC; DNA repair protein SbcC/Rad50 D SRU_0687 nuclease SbcCD, D subunit subfamily, putative K03547 sbcD; DNA repair protein SbcD/Mre11 D SRU_2007 Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11 D SRU_2500 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D SRU_0067 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D SRU_0269 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D SRU_1176 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D SRU_2555 recR; recombination protein RecR K06187 recR; recombination protein RecR D SRU_0800 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D SRU_2289 putative helicase K19789 radD; DNA repair protein RadD D SRU_2199 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SRU_1483 type II DNA topoisomerase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SRU_2408 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SRU_1118 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D SRU_1377 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SRU_1063 hup; probable DNA-binding protein HU K05788 ihfB; integration host factor subunit beta D SRU_1673 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_0299 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D SRU_1539 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D SRU_p0002 umuC protein K03502 umuC; DNA polymerase V D SRU_0305 protein umuC K03502 umuC; DNA polymerase V D SRU_0304 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D SRU_0551 LexA repressor, putative K01356 lexA; repressor LexA [EC:3.4.21.88] D SRU_1177 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D SRU_2134 recX; regulatory protein RecX K03565 recX; regulatory protein D SRU_1682 PHP domain protein K02347 polX; DNA polymerase (family X) D SRU_2238 hydrolase, NUDIX family protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D SRU_0132 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0300 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SRU_0131 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D SRU_1005 dhh family/dhha1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:sru03029] D SRU_1777 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D SRU_2803 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D SRU_0035 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D SRU_1766 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_1033 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_1032 fusA; translation elongation factor G K02355 fusA; elongation factor G D SRU_1150 fus; elongation factor G K02355 fusA; elongation factor G D SRU_2081 era; GTP-binding protein Era K03595 era; GTPase D SRU_1623 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SRU_0933 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SRU_1963 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SRU_2334 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SRU_0986 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SRU_0671 Amidase, putative K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SRU_1902 glutamyl-tRNA K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SRU_1282 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SRU_0523 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_0716 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SRU_1846 outer membrane protein, putative K07277 SAM50; outer membrane protein insertion porin family D SRU_1262 outer membrane protein, OMP85 family, putative K07277 SAM50; outer membrane protein insertion porin family D SRU_1300 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D SRU_2352 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D SRU_2122 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_0237 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_2121 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES D SRU_0862 groS; chaperonin, 10 kDa K04078 groES; chaperonin GroES D SRU_2351 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D SRU_0467 dnaJ; dnaJ protein K03686 dnaJ; molecular chaperone DnaJ D SRU_1858 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SRU_1266 conserved hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1 D SRU_2396 conserved hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1 D SRU_0821 mrp; mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D SRU_2369 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D SRU_2368 putative cytochrome aa3 oxidase assembly protein, putative CtaA K02259 COX15; heme a synthase [EC:1.17.99.9] D SRU_0055 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D SRU_0005 SCO1/SenC family protein K07152 SCO1; protein SCO1 D SRU_0107 electron transport protein/SenC K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:sru02000] D SRU_2836 ABC transporter, ATP binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D SRU_2165 ABC transporter, ATP-binding protein, MDR family K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D SRU_2163 ABC transporter, ATP-binding protein, MsbA family K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D SRU_0598 ABC transporter, multidrug efflux family K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D SRU_0999 ATP-binding protein of ABC transporter K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D SRU_2400 Bacterial extracellular solute-binding protein, putative K02012 afuA; iron(III) transport system substrate-binding protein D SRU_2399 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D SRU_2398 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D SRU_0434 glycine betaine ABC transporter glycine betaine-binding protein, putative K02002 proX; glycine betaine/proline transport system substrate-binding protein D SRU_0433 ABC transporter, substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D SRU_0432 glycine betaine/L-proline transport system permease protein proW K02001 proW; glycine betaine/proline transport system permease protein D SRU_0431 proV; glycine betaine/L-proline transport ATP binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D SRU_2474 transmembrane protein K05845 opuC; osmoprotectant transport system substrate-binding protein D SRU_2473 ABC transporter, ATP-binding protein, putative K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D SRU_1465 sugar ABC transporter, periplasmic sugar-binding protein K17321 glpV; glycerol transport system substrate-binding protein D SRU_1468 ABC transporter, permease protein K17322 glpP; glycerol transport system permease protein D SRU_1467 sugar ABC transporter, permease protein K17323 glpQ; glycerol transport system permease protein D SRU_1470 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D SRU_1469 ABC transporter, ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D SRU_2451 conserved hypothetical protein TIGR00245 K02069 STAR2; UDP-glucose/iron transport system permease protein D SRU_2452 proV; choline transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D SRU_2503 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D SRU_0342 paraquant-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D SRU_0344 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D SRU_2501 domain of unknown function superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D SRU_2502 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D SRU_0343 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D SRU_2750 putative periplasmic efflux protein K07323 mlaC; phospholipid transport system substrate-binding protein D SRU_2293 pstS; phosphate ABC transporter, phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D SRU_2294 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D SRU_2295 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D SRU_2296 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D SRU_2728 hemin-binding periplasmic protein hmut precursor K25132 hmuT; heme transport system substrate-binding protein D SRU_2729 hemin ABC transporter, permease protein, putative K25133 hmuU; heme transport system permease protein D SRU_2731 hemin ABC transporter, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D SRU_1225 periplasmic binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D SRU_0868 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D SRU_1654 conserved hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D SRU_1224 hemin ABC transporter, permease protein, putative K02015 ABC.FEV.P; iron complex transport system permease protein D SRU_1293 hemin ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D SRU_0729 bioY family protein K03523 bioY; biotin transport system substrate-specific component D SRU_2087 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein D SRU_1124 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein D SRU_1362 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D SRU_0294 ABC transporter, nucleotide binding/ATPase protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D SRU_0311 NosF protein K19340 nosF; Cu-processing system ATP-binding protein D SRU_1250 probable permease of ABC transporter K25151 gldF; gliding motility-associated transport system permease protein D SRU_1251 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein D SRU_1249 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component D SRU_0019 membrane protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein D SRU_1516 putative permease domain protein K09808 lolC_E; lipoprotein-releasing system permease protein D SRU_1203 lipoprotein-releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D SRU_2189 heme exporter protein C, putative K02195 ccmC; heme exporter protein C D SRU_2188 heme exporter, protein B, putative K02194 ccmB; heme exporter protein B D SRU_0792 lipoprotein-releasing system ATP-binding protein lolD K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D SRU_1954 cell division ABC transporter, permease protein FtsX, putative K09811 ftsX; cell division transport system permease protein D SRU_1007 ftsE; cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SRU_2672 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SRU_1196 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SRU_2371 ABC-2 type transporter superfamily K01992 ABC-2.P; ABC-2 type transport system permease protein D SRU_0751 putative integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SRU_0173 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SRU_2479 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_1197 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_2671 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_2523 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_0752 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_2370 drrA; daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_0147 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SRU_2851 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D SRU_2852 ybjZ; ABC transporter, ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D SRU_1330 putative permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein D SRU_0696 putative permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein D SRU_1331 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SRU_2848 ATP-binding protein of ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SRU_1386 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D SRU_2259 Na-K-Cl cotransporter, putative K10951 SLC12A2; solute carrier family 12 (sodium/potassium/chloride transporter), member 2 D SRU_2717 putative multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump D SRU_1721 DNA damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump D SRU_2291 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D SRU_2846 Sugar transporter subfamily K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D SRU_0134 transporter, major facilitator family K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D SRU_2307 major facilitator superfamily protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D SRU_1872 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D SRU_1873 HPr-like protein crh K02784 ptsH; phosphocarrier protein HPr D SRU_0838 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D SRU_0409 potassium channel, putative K10716 kch; voltage-gated potassium channel D SRU_2386 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D SRU_2569 putative batB protein K07114 yfbK; Ca-activated chloride channel homolog D SRU_2570 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D SRU_2195 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D SRU_1306 transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel D SRU_1840 transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel D SRU_1198 transporter, small conductance mechanosensitive ion channel (MscS) family K22044 ybiO; moderate conductance mechanosensitive channel D SRU_2705 small-conductance mechanosensitive channel, putative K16052 ynaI; MscS family membrane protein D SRU_2193 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D SRU_2594 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D SRU_2593 probable chemotaxis protein K02557 motB; chemotaxis protein MotB D SRU_2237 OmpA domain protein, putative K02557 motB; chemotaxis protein MotB D SRU_2697 OmpA family protein K02557 motB; chemotaxis protein MotB D SRU_1587 putative biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D SRU_1681 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D SRU_1588 ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D SRU_0804 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D SRU_2454 crcB; crcB protein K06199 crcB; fluoride exporter D SRU_0924 Domain of unknown function domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SRU_0418 Phosphate-selective porin O and P superfamily K07221 oprO_P; phosphate-selective porin OprO and OprP D SRU_0806 Phosphate-selective porin O and P superfamily K07221 oprO_P; phosphate-selective porin OprO and OprP D SRU_1951 long-chain fatty acid transport protein precursor, putative K06076 fadL; long-chain fatty acid transport protein D SRU_0096 TonB-dependent receptor domain protein K19611 fepA; ferric enterobactin receptor D SRU_0844 putative TonB-dependent outer membrane protein K16091 fecA; Fe(3+) dicitrate transport protein D SRU_0871 iron compound TonB-dependent receptor, putative K16092 btuB; vitamin B12 transporter D SRU_2735 TonB-dependent receptor domain protein K16092 btuB; vitamin B12 transporter D SRU_0358 outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC D SRU_2727 outer membrane receptor for transport of vitamin B, putative K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D SRU_1887 putative outer membrane receptor protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D SRU_2108 TonB dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_2415 bfeA; ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_2313 ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_0117 putative outer membrane receptor for iron transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_1297 outer membrane protein, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_0392 TonB-dependent receptor domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D SRU_2824 probable cobalt-zinc-cadmium outer membrane resistance protein, putative K15725 czcC; outer membrane protein, heavy metal efflux system D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0476 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D SRU_1846 outer membrane protein, putative K07277 SAM50; outer membrane protein insertion porin family D SRU_1262 outer membrane protein, OMP85 family, putative K07277 SAM50; outer membrane protein insertion porin family D SRU_2073 tetratricopeptide repeat domain protein K05807 bamD; outer membrane protein assembly factor BamD D SRU_2117 outer membrane protein, OMP85 family, putative K07278 tamA; translocation and assembly module TamA D SRU_1261 Domain of unknown function (DUF490) family K09800 tamB; translocation and assembly module TamB D SRU_1527 hypothetical protein K09800 tamB; translocation and assembly module TamB D SRU_p0012 GLUG domain protein K21449 ata; trimeric autotransporter adhesin D SRU_1436 gufA; gufA protein K07238 TC.ZIP; zinc transporter, ZIP family D SRU_0328 gufA; gufA protein K07238 TC.ZIP; zinc transporter, ZIP family D SRU_1896 conserved hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D SRU_2826 cation efflux system protein czcA K15726 czcA; heavy metal efflux system protein D SRU_0725 multidrug resistance protein, putative K18138 acrB; multidrug efflux pump D SRU_0925 multidrug resistance protein, putative K18989 vexF; multidrug efflux pump D SRU_1817 nce; Na+/Ca2+-exchanging protein K07301 yrbG; cation:H+ antiporter D SRU_2028 putative cation transporter K07301 yrbG; cation:H+ antiporter D SRU_1402 K+-dependent Na+/Ca+ exchanger-like protein K07301 yrbG; cation:H+ antiporter D SRU_1019 proline permease ^, putative K11928 putP; sodium/proline symporter D SRU_2777 Na+/H+ antiporter, putative K18218 tet35; tetracycline resistance efflux pump D SRU_1329 putative potassium-efflux system protein K26730 napA; Na+:H+ antiporter D SRU_2269 trkH1; TrkH potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D SRU_2271 trkH2; TrkH potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D SRU_2262 trkA1; Trk potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D SRU_2270 trkA4; Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D SRU_2266 trkA3; Trk potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D SRU_0703 trkA; TRK potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D SRU_0855 TRK potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein D SRU_2239 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D SRU_2421 arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D SRU_2460 conserved protein K03325 ACR3; arsenite transporter D SRU_1695 NADH dehydrogenase, putative K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D SRU_1694 Domain putative MnhB subunit of Na+/H+ antiporter superfamily K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D SRU_1693 cation transport system protein, putative K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D SRU_1692 NADH-Ubiquinone/plastoquinone (complex I), various chains domain protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D SRU_1691 Na+/H+ ion antiporter subunit family K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D SRU_1697 pH adaptation potassium efflux system phaF, putative K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D SRU_1696 monovalent cation/proton antiporter, MnhG/PhaG subunit subfamily K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D SRU_0494 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D SRU_2316 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D SRU_2562 conserved hypothetical protein TIGR00427 K05595 marC; multiple antibiotic resistance protein D SRU_0559 cell division protein FtsW, putative K03588 ftsW; cell division protein FtsW D SRU_0270 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D SRU_2055 periplasmic protein-probably involved in high-affinity fe2+ transport, putative K07230 p19; periplasmic iron binding protein D SRU_1967 TonB family C-terminal domain protein K03832 tonB; periplasmic protein TonB D SRU_0510 TonB K03832 tonB; periplasmic protein TonB D SRU_0262 TonB, putative K03832 tonB; periplasmic protein TonB D SRU_0958 TonB family C-terminal domain protein K03832 tonB; periplasmic protein TonB D SRU_1371 TonB, putative K03832 tonB; periplasmic protein TonB D SRU_0812 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D SRU_2825 cation efflux system protein CzcB-like protein K15727 czcB; membrane fusion protein, heavy metal efflux system D SRU_0724 putative HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D SRU_0926 efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system D SRU_2842 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family D SRU_2181 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family D SRU_0359 outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family D SRU_1022 mitochondrial benzodiazepine receptor/sensory transduction protein K05770 TSPO; translocator protein D SRU_2143 cytochrome c biogenesis factor K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:sru02044] D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_1280 general (Type II) secretion pathway (GSP) D protein, putative K02453 gspD; general secretion pathway protein D D SRU_1273 type IV pilin K02652 pilB; type IV pilus assembly protein PilB D SRU_1272 Bacterial type II secretion system protein F domain K02653 pilC; type IV pilus assembly protein PilC D SRU_1277 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D SRU_0014 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D SRU_2584 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D SRU_2585 flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D SRU_2617 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D SRU_2615 hypothetical protein K02411 fliH; flagellar assembly protein FliH D SRU_2614 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SRU_2590 possible flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D SRU_2589 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D SRU_2588 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D SRU_2587 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D SRU_2586 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D SRU_0801 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SRU_1829 secD; protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D SRU_1764 preprotein translocase, SecE subunit, putative K03073 secE; preprotein translocase subunit SecE D SRU_1828 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D SRU_2114 putative protein-export membrane protein K03075 secG; preprotein translocase subunit SecG D SRU_1054 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D SRU_1630 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SRU_2172 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D SRU_0011 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D SRU_0055 inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D SRU_0672 putative sec-independent protein transporter K03116 tatA; sec-independent protein translocase protein TatA D SRU_0777 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:sru02042] D SRU_0924 Domain of unknown function domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SRU_1221 hemolysin, putative K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:sru02022] D SRU_0865 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D SRU_2292 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2488 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2491 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D SRU_2790 response regulator receiver:histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SRU_0836 response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D SRU_0129 putative light- and oxygen-sensing transcription regulator K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D SRU_2492 PhoP3 response regulator K02483 K02483; two-component system, OmpR family, response regulator D SRU_0472 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_2048 putative two-component system sensory/regulatory protein, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3] D SRU_0259 Histidine kinase family K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D SRU_2326 two-component signal transduction histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D SRU_2856 probable transmembrane sensor histidine kinase transcription regulator protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D SRU_0258 alginate biosynthesis regulatory protein K02477 K02477; two-component system, LytTR family, response regulator D SRU_2855 two-component system response regulator protein K02477 K02477; two-component system, LytTR family, response regulator D SRU_0416 algR; two-component system, regulatory protein K02477 K02477; two-component system, LytTR family, response regulator D SRU_0749 response regulator K02477 K02477; two-component system, LytTR family, response regulator D SRU_2726 LytTr DNA-binding domain family K02477 K02477; two-component system, LytTR family, response regulator D SRU_2327 LytTr DNA-binding domain family K02477 K02477; two-component system, LytTR family, response regulator D SRU_2602 cheA; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D SRU_2604 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D SRU_2601 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D SRU_0336 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D SRU_0854 mutant NtrC-like activator K11443 divK; two-component system, cell cycle response regulator DivK D SRU_1122 FixL-related histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D SRU_2623 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC D SRU_2427 probable sensor/response hybrid, putative K20976 hptB; histidine phosphotransfer protein HptB C 02035 Bacterial motility proteins [BR:sru02035] D SRU_2602 cheA; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D SRU_2606 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D SRU_2605 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D SRU_2601 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D SRU_0336 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D SRU_2604 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D SRU_2597 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D SRU_2595 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_0141 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 mcp; methyl-accepting chemotaxis protein D SRU_2599 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D SRU_2615 hypothetical protein K02411 fliH; flagellar assembly protein FliH D SRU_2614 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D SRU_2613 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D SRU_2589 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D SRU_2588 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D SRU_2587 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D SRU_2586 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D SRU_2584 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D SRU_2585 flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB D SRU_2616 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D SRU_2591 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D SRU_2590 possible flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN D SRU_2617 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D SRU_2640 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D SRU_2642 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D SRU_2641 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D SRU_2592 fliL; Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D SRU_2618 fliE; flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D SRU_2621 Flagella basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB D SRU_2620 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D SRU_2609 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D SRU_2644 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D SRU_2643 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D SRU_2639 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D SRU_2607 flagellar biosynthesis cell-distal portion of basal-body rod K02390 flgE; flagellar hook protein FlgE D SRU_2637 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D SRU_2636 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D SRU_2631 phase 1 flagellin K02406 fliC; flagellin D SRU_2630 flagellin K02406 fliC; flagellin D SRU_2626 Flagellar hook-associated protein 2 C-terminus K02407 fliD; flagellar hook-associated protein 2 D SRU_2627 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D SRU_2581 RNA polymerase sigma-28 factor K02405 fliA; RNA polymerase sigma factor FliA D SRU_2594 motA; chemotaxis motA protein K02556 motA; chemotaxis protein MotA D SRU_2593 probable chemotaxis protein K02557 motB; chemotaxis protein MotB D SRU_2237 OmpA domain protein, putative K02557 motB; chemotaxis protein MotB D SRU_2697 OmpA family protein K02557 motB; chemotaxis protein MotB D SRU_2623 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC D SRU_2583 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D SRU_2582 putative flagellar biosynthesis protein, putative K04562 flhG; flagellar biosynthesis protein FlhG D SRU_1277 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D SRU_1273 type IV pilin K02652 pilB; type IV pilus assembly protein PilB D SRU_1272 Bacterial type II secretion system protein F domain K02653 pilC; type IV pilus assembly protein PilC C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:sru04812] D SRU_1640 regulator of ftsI, penicillin binding protein 3, septation function K03569 mreB; rod shape-determining protein MreB and related proteins D SRU_2434 hypothetical protein K18640 parM; plasmid segregation protein ParM D SRU_0564 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SRU_0563 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D SRU_0514 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein D SRU_p0029 parA; plasmid partition protein K03496 parA; chromosome partitioning protein D SRU_0764 Soj family protein K03496 parA; chromosome partitioning protein D SRU_0953 ParA family protein K03496 parA; chromosome partitioning protein D SRU_2029 conserved hypothetical protein K03496 parA; chromosome partitioning protein D SRU_0515 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:sru04147] D SRU_0787 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SRU_1200 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SRU_1027 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SRU_0920 Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D SRU_0391 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D SRU_2122 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_0237 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SRU_1300 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D SRU_0572 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D SRU_1496 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SRU_1766 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_1033 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D SRU_2792 hypothetical HIT-like protein slr1234 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SRU_0681 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SRU_2380 AMP-binding enzyme, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1209 fadD; putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SRU_1547 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SRU_1139 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D SRU_1875 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SRU_2221 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SRU_2214 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SRU_2363 Cys/Met metabolism PLP-dependent enzyme superfamily K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D SRU_1258 L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D SRU_2360 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D SRU_1856 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_1474 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D SRU_0846 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SRU_1471 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D SRU_0385 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SRU_1013 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D SRU_1370 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D SRU_1447 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D SRU_2450 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0238 alkaline phosphatase family protein, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_1639 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SRU_0656 caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D SRU_1267 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D SRU_1603 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SRU_0505 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_2255 glutamate dehydrogenase, short peptide K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D SRU_0078 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SRU_1905 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:sru02048] D SRU_1102 HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D SRU_1099 type I restriction-modification system, S subunit, putative K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D SRU_1098 putative type i restriction enzyme hindviip m protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D SRU_1632 PspC domain family K03973 pspC; phage shock protein C D SRU_2816 death on curing protein K07341 doc; death on curing protein D SRU_0629 higA; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D SRU_0564 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SRU_1640 regulator of ftsI, penicillin binding protein 3, septation function K03569 mreB; rod shape-determining protein MreB and related proteins D SRU_1484 type II DNA topoisomerase, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SRU_1796 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SRU_1858 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors [BR:sru04030] D SRU_2579 Sensory rhodopsin (SRI) K04643 sop; sensory rhodopsin D SRU_2511 Sensory rhodopsin (SRI) K04643 sop; sensory rhodopsin C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:sru04090] D SRU_0572 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:sru01504] D SRU_2777 Na+/H+ antiporter, putative K18218 tet35; tetracycline resistance efflux pump D SRU_1192 TonB family C-terminal domain protein K02172 blaR1; bla regulator protein blaR1 D SRU_0298 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_1193 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D SRU_0724 putative HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D SRU_0725 multidrug resistance protein, putative K18138 acrB; multidrug efflux pump D SRU_0476 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D SRU_2850 outer membrane efflux protein K12340 tolC; outer membrane protein D SRU_0083 cation efflux system protein, putative K12340 tolC; outer membrane protein D SRU_0726 putative outer membrane protein TolC K12340 tolC; outer membrane protein D SRU_2751 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sru00537] D SRU_2450 alkaline phosphatase, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0238 alkaline phosphatase family protein, putative K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D SRU_0920 Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D SRU_0391 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:sru03100] D SRU_2689 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1082 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SRU_1717 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_0782 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_0949 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_1238 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SRU_2035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D SRU_1897 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D SRU_0025 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D SRU_0816 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SRU_2300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SRU_2675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SRU_1070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SRU_1815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_1836 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SRU_1069 tRNA-His K14226 tRNA-His; tRNA His D SRU_2690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D SRU_2311 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_2033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1989 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1883 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SRU_1485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SRU_2310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SRU_0379 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_0856 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_1813 tRNA-Met K14230 tRNA-Met; tRNA Met D SRU_1610 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D SRU_2379 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_1522 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SRU_0917 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_2857 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_1543 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_0032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SRU_1649 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_1814 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_2472 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SRU_1765 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D SRU_1816 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D SRU_2801 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_0051 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_0500 tRNA-Val K14237 tRNA-Val; tRNA Val D SRU_2691 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SRU_2688 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SRU_2687 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SRU_1111 sRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D SRU_0451 pyrroloquinoline-quinone glucose dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D SRU_0850 gfo; glucose-fructose oxidoreductase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28] D SRU_2863 conserved hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5] D SRU_0667 Pyridine nucleotide-disulphide oxidoreductase, putative K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D SRU_1074 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D SRU_1576 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D SRU_2776 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D SRU_2775 putative methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D SRU_1818 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D SRU_2109 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D SRU_0099 mauG; methylamine utilization protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D SRU_1515 antioxidant, AhpC/TSA family K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] D SRU_1305 osmC; osmotically inducible protein C K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D SRU_1688 DUF209:Cupin domain K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D SRU_2210 membrane protein, putative K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D SRU_0742 brp; bacteriorhodopsin related protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D SRU_0127 15,15' beta carotene dioxygenase K10252 BCDO2; beta,beta-carotene 9',10'-dioxygenase [EC:1.13.11.71] D SRU_1801 ferredoxin nadp+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D SRU_2458 Low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D SRU_1945 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D SRU_2314 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) family K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D SRU_0213 carbamoyltransferase family K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D SRU_0260 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D SRU_0827 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D SRU_2085 glycosyl transferase, group 1 family protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D SRU_0984 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D SRU_1946 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D SRU_2169 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D SRU_2201 hypothetical protein K08095 CUT1_2_3; cutinase [EC:3.1.1.74] D SRU_0547 Appr-1-p processing enzyme family protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D SRU_2158 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D SRU_2347 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D SRU_1067 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D SRU_1520 uncharacterized domain HDIG protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D SRU_1299 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D SRU_p0026 nuclease, putative K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D SRU_1808 protein parB K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D SRU_0946 hydrolase, alpha/beta fold family, putative K01175 ybfF; esterase [EC:3.1.-.-] D SRU_2409 glycosyl hydrolase, family 13, putative K21575 susA; neopullulanase [EC:3.2.1.135] D SRU_1291 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D SRU_1143 Penicillin amidase superfamily K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D SRU_1865 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D SRU_0934 GlcNAc-PI de-N-acetylase family K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D SRU_0604 hypothetical conserved protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D SRU_0866 GlcNAc-PI de-N-acetylase family K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D SRU_2495 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D SRU_2170 ATPase family associated with various cellular activities (AAA), putative K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D SRU_1800 moxR; methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D SRU_0502 Low molecular weight protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D SRU_1824 Protein of unknown function superfamily K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D SRU_0508 predicted sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D SRU_1647 paaY; carbonic anhydrase K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-] D SRU_1270 ilvA; threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D SRU_2431 peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D SRU_1689 methylmalonyll-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D SRU_2747 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent helicase HrpB [EC:3.6.4.13] D SRU_0923 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D SRU_0335 heavy-metal transporting CPx-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D SRU_0325 heavy metal translocating P-type ATPase subfamily K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D SRU_0111 cadmium efflux ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D SRU_0549 CBS-domain-containing protein K04767 acuB; acetoin utilization protein AcuB D SRU_2411 acetoin utilization protein, putative K04767 acuB; acetoin utilization protein AcuB D SRU_2345 acetoin utilization protein acuC K04768 acuC; acetoin utilization protein AcuC D SRU_2130 conserved hypothetical protein K22136 bshC; bacillithiol synthase C 99982 Energy metabolism D SRU_0241 conserved hypothetical protein K05337 fer; ferredoxin D SRU_0243 ferredoxin K05524 fdxA; ferredoxin D SRU_1145 ferredoxin-1 K05524 fdxA; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D SRU_1380 glyoxalase family protein K08234 yaeR; glyoxylase I family protein D SRU_0694 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D SRU_1884 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D SRU_1570 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D SRU_2686 probable ubiquinone biosynthesis protein, putative K03688 ubiB; ubiquinone biosynthesis protein D SRU_1577 AbgT putative transporter family K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others D SRU_2741 glyoxalase family protein K15975 K15975; glyoxalase family protein D SRU_2868 ABC transporter substrate-binding protein K15975 K15975; glyoxalase family protein D SRU_0425 DoxD-like family protein K15977 K15977; putative oxidoreductase D SRU_0426 DoxX subfamily, putative K15977 K15977; putative oxidoreductase D SRU_0411 DoxX subfamily, putative K15977 K15977; putative oxidoreductase D SRU_2453 putative membrane protein K15977 K15977; putative oxidoreductase D SRU_0047 DoxX subfamily, putative K15977 K15977; putative oxidoreductase D SRU_2742 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase D SRU_2123 acetyltransferase, GNAT family K09181 yfiQ; acetyltransferase D SRU_1493 Protein of unknown function (DUF1094) family K26958 brxA_B; bacilliredoxin D SRU_1311 general stress protein K26959 brxC; monothiol bacilliredoxin B B 09192 Unclassified: genetic information processing C 99973 Transcription D SRU_1727 conserved domain protein K03704 cspA; cold shock protein D SRU_2091 cspa; conserved domain protein K03704 cspA; cold shock protein D SRU_0966 'Cold-shock' DNA-binding domain, putative K03704 cspA; cold shock protein D SRU_2449 conserved domain protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D SRU_0964 ATP-dependent Clp protease adaptor protein ClpS, putative K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D SRU_2673 tig; trigger factor K03545 tig; trigger factor D SRU_1624 SsrA-binding protein K03664 smpB; SsrA-binding protein D SRU_1589 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein D SRU_1219 OsmC-like protein K07397 yhfA; putative redox protein D SRU_2280 predicted redox protein K07397 yhfA; putative redox protein C 99976 Replication and repair D SRU_2179 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D SRU_2183 putative 6-O-methylguanine DNA methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D SRU_0540 HNH endonuclease family protein K07454 K07454; putative restriction endonuclease D SRU_0541 conserved hypothetical protein K07454 K07454; putative restriction endonuclease D SRU_2338 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D SRU_1822 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease D SRU_2245 GIY-YIG catalytic domain, putative K07461 K07461; putative endonuclease D SRU_1187 dprA; DNA processing protein DprA K04096 smf; DNA processing protein D SRU_0988 ATPase, AAA family protein K07478 ycaJ; putative ATPase D SRU_0713 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_0731 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_0109 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_2483 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_2024 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_2456 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_2704 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_2336 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_1398 ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB D SRU_0188 IS110 family transposase K07486 K07486; transposase D SRU_0226 IS110 family transposase K07486 K07486; transposase D SRU_2772 IS110 family transposase K07486 K07486; transposase D SRU_0191 IS605 family transposase orfA K07491 rayT; REP-associated tyrosine transposase D SRU_0640 IS605 family transposase orfA K07491 rayT; REP-associated tyrosine transposase D SRU_0641 IS605 family transposase orfB K07496 K07496; putative transposase D SRU_0236 transposase K07496 K07496; putative transposase D SRU_0196 IS605 family transposase K07496 K07496; putative transposase D SRU_0219 IS605 family transposase K07496 K07496; putative transposase D SRU_0192 IS605 family transposase orfB K07496 K07496; putative transposase D SRU_0200 IS605 family transposase K07496 K07496; putative transposase D SRU_2395 IS605 family transposase K07496 K07496; putative transposase D SRU_1105 transposase, degenerate K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D SRU_1164 conserved hypothetical protein K03969 pspA; phage shock protein A D SRU_2004 Type I restriction enzyme R protein N terminus (HSDR_N) K07504 K07504; predicted type IV restriction endonuclease D SRU_2556 conserved hypothetical protein TIGR00103, putative K09747 ebfC; nucleoid-associated protein EbfC D SRU_1179 phrB; deoxyribodipyrimidine photolyase K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D SRU_2312 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D SRU_1021 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D SRU_2260 cat2; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D SRU_2275 cat5; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D SRU_2263 cat3; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D SRU_1182 acriflavine resistance protein (cation efflux system) K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D SRU_1962 proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D SRU_1998 panF; pantothenate permease K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_0277 sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_0355 sodium/glucose cotransporter 2 K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_2840 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_0371 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_2779 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_0374 transporter, solute:sodium symporter (SSS) family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D SRU_0899 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D SRU_0900 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D SRU_0766 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D SRU_1286 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D SRU_0536 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D SRU_1746 spore maturation protein A K06373 spmA; spore maturation protein A D SRU_1747 membrane protein, putative K06374 spmB; spore maturation protein B D SRU_1602 M23 peptidase domain protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D SRU_0465 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D SRU_1414 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D SRU_1569 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D SRU_1844 Outer membrane protein (OmpH-like) K06142 hlpA; outer membrane protein D SRU_1845 outer membrane protein OmpH, putative K06142 hlpA; outer membrane protein D SRU_2849 membrane fusion efflux protein, putative K02005 ABC.CD.TX; HlyD family secretion protein D SRU_1183 putative membrane efflux protein K02005 ABC.CD.TX; HlyD family secretion protein D SRU_2191 cytochrome c-type biogenesis protein CcmE, putative K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D SRU_0442 phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein D SRU_2297 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D SRU_0421 apag protein K06195 apaG; ApaG protein D SRU_0310 nosD; NosD protein K07218 nosD; nitrous oxidase accessory protein D SRU_2732 Haemin-degrading family K07225 hmuS; putative hemin transport protein B B 09194 Poorly characterized C 99996 General function prediction only D SRU_1870 cvpA; CvpA family protein K03558 cvpA; membrane protein required for colicin V production D SRU_0898 hypothetical protein K05811 yfiM; putative lipoprotein D SRU_0413 phospholipase, patatin family K07001 K07001; NTE family protein D SRU_2685 phospholipase, patatin family K07001 K07001; NTE family protein D SRU_0519 haloacid dehalogenase-like hydrolase, putative K07025 K07025; putative hydrolase of the HAD superfamily D SRU_1387 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D SRU_1385 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D SRU_1307 integral membrane protein K07038 K07038; inner membrane protein D SRU_1263 yihY; YihY family protein K07058 K07058; membrane protein D SRU_1802 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D SRU_1383 sufE; Fe-S metabolism associated domain subfamily K02426 sufE; cysteine desulfuration protein SufE D SRU_2236 HAD superfamily (subfamily IA) hydrolase, TIGR01548 K11777 K11777; HAD superfamily phosphatase D SRU_0101 lemA protein K03744 lemA; LemA protein D SRU_2699 Domain of unknown function (DUF368) superfamily K08974 K08974; putative membrane protein D SRU_0661 Bacterial membrane flanked domain family K08981 K08981; putative membrane protein D SRU_0705 conserved hypothetical protein K08983 K08983; putative membrane protein D SRU_1379 Domain of unknown function (DUF477) superfamily K08988 K08988; putative membrane protein C 99997 Function unknown D SRU_2404 conserved hypothetical protein K06867 K06867; uncharacterized protein D SRU_0102 conserved hypothetical protein K06872 K06872; uncharacterized protein D SRU_1706 HD domain protein K06885 K06885; uncharacterized protein D SRU_1548 Protein of unknown function, DUF255 family K06888 K06888; uncharacterized protein D SRU_2724 lipoprotein, putative K06889 K06889; uncharacterized protein D SRU_0062 conserved hypothetical protein K06889 K06889; uncharacterized protein D SRU_1646 conserved hypothetical protein K06889 K06889; uncharacterized protein D SRU_0932 CoA binding domain protein K06929 K06929; uncharacterized protein D SRU_2678 HD domain protein K06950 K06950; uncharacterized protein D SRU_0070 hypothetical protein K07003 K07003; uncharacterized protein D SRU_2232 hydrolase, alpha/beta fold family protein K07019 K07019; uncharacterized protein D SRU_1458 conserved hypothetical protein K07028 K07028; uncharacterized protein D SRU_0723 conserved hypothetical protein K07071 K07071; uncharacterized protein D SRU_0642 Nucleotidyltransferase domain, putative K07075 K07075; uncharacterized protein D SRU_0585 conserved hypothetical protein K07075 K07075; uncharacterized protein D SRU_0327 Domain of unknown function, putative K07090 K07090; uncharacterized protein D SRU_1938 phosphoesterase, putative subfamily K07095 K07095; uncharacterized protein D SRU_0334 Ser/Thr protein phosphatase family protein K07096 K07096; uncharacterized protein D SRU_2113 uncharacterized ACR, superfamily K07164 K07164; uncharacterized protein D SRU_1017 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein D SRU_2129 Uncharacterized ACR, COG1259 family K08999 K08999; uncharacterized protein D SRU_0331 hypothetical protein K09004 K09004; uncharacterized protein D SRU_1389 conserved hypothetical protein K09005 K09005; uncharacterized protein D SRU_1390 conserved hypothetical protein K09005 K09005; uncharacterized protein D SRU_1871 GatB/Yqey domain superfamily K09117 K09117; uncharacterized protein D SRU_2225 membrane protein, putative K09118 K09118; uncharacterized protein D SRU_0179 Protein of unknown function superfamily K09132 K09132; uncharacterized protein D SRU_1243 uncharacterized conserved protein K09158 K09158; uncharacterized protein D SRU_1152 Protein of unknown function (DUF1684) superfamily K09164 K09164; uncharacterized protein D SRU_1950 hypothetical protein K09166 K09166; uncharacterized protein D SRU_0662 putative integral membrane protein K09167 K09167; uncharacterized protein D SRU_1830 Protein of unknown function (DUF541) superfamily K09807 K09807; uncharacterized protein D SRU_2057 conserved hypothetical protein K09822 K09822; uncharacterized protein D SRU_0341 Protein of unknown function (DUF330) superfamily K09857 K09857; uncharacterized protein D SRU_0526 Protein of unknown function (DUF328) superfamily K09861 K09861; uncharacterized protein D SRU_1857 conserved hypothetical protein K09931 K09931; uncharacterized protein D SRU_2110 conserved hypothetical protein K09966 K09966; uncharacterized protein D SRU_0130 GumN protein K09973 K09973; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024