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  Transcription Machinery - Tremella mesenterica

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AEukaryotic type B RNA polymerase II system C RNA polymerase II D Core subunits E TREMEDRAFT_40446 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] E TREMEDRAFT_70991 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] E TREMEDRAFT_45370 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 E TREMEDRAFT_44159 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 D Pol II specific subunits E TREMEDRAFT_62158 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 E TREMEDRAFT_71846 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E TREMEDRAFT_29252 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 D Pol I, II, III common subunits E TREMEDRAFT_29545 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E TREMEDRAFT_60336 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E TREMEDRAFT_24691 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E TREMEDRAFT_29645 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 D Pol IV and V specific subunits C Basal transcription factors D TFIIA E TREMEDRAFT_64096 hypothetical protein K03122 TFIIA1; transcription initiation factor TFIIA large subunit E TREMEDRAFT_28361 hypothetical protein K03123 TFIIA2; transcription initiation factor TFIIA small subunit D TFIIB D TFIID E TREMEDRAFT_41045 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E TREMEDRAFT_24569 hypothetical protein K23358 TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48] E TREMEDRAFT_73329 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2 E TREMEDRAFT_70068 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5 E TREMEDRAFT_70674 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6 E TREMEDRAFT_61532 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7 E TREMEDRAFT_32628 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B E TREMEDRAFT_19213 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10 E TREMEDRAFT_58805 hypothetical protein K03135 TAF11; transcription initiation factor TFIID subunit 11 D TFIIE E TREMEDRAFT_25597 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha E TREMEDRAFT_35345 hypothetical protein K03137 TFIIE2; transcription initiation factor TFIIE subunit beta D TFIIF E TREMEDRAFT_12890 hypothetical protein K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha E TREMEDRAFT_45844 hypothetical protein K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] D TFIIH E TREMEDRAFT_70349 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E TREMEDRAFT_72606 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E TREMEDRAFT_62112 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E TREMEDRAFT_33390 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E TREMEDRAFT_68365 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E TREMEDRAFT_30972 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E TREMEDRAFT_29558 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E TREMEDRAFT_33381 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E TREMEDRAFT_35912 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1 E TREMEDRAFT_25459 hypothetical protein K06634 CCNH; cyclin H C Mediator complex D Head E TREMEDRAFT_28815 hypothetical protein K15128 MED6; mediator of RNA polymerase II transcription subunit 6 D Middle E TREMEDRAFT_26120 hypothetical protein K15146 MED4; mediator of RNA polymerase II transcription subunit 4 E TREMEDRAFT_64882 hypothetical protein K15147 MED5; mediator of RNA polymerase II transcription subunit 5 E TREMEDRAFT_25849 hypothetical protein K15148 MED7; mediator of RNA polymerase II transcription subunit 7 E TREMEDRAFT_35695 hypothetical protein K15151 MED10; mediator of RNA polymerase II transcription subunit 10 E TREMEDRAFT_33299 hypothetical protein K15153 MED31; mediator of RNA polymerase II transcription subunit 31 D Tail E TREMEDRAFT_37169 hypothetical protein K15156 MED14; mediator of RNA polymerase II transcription subunit 14 D CDK-module E TREMEDRAFT_30695 hypothetical protein K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] E TREMEDRAFT_24507 hypothetical protein K15161 CCNC; cyclin-C E TREMEDRAFT_28055 hypothetical protein K15163 SRB8; mediator of RNA polymerase II transcription subunit 12, fungi type D Other mediators C Coactivators D SAGA/TFTC/STAGA complex E TREMEDRAFT_29235 hypothetical protein K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] E TREMEDRAFT_71446 hypothetical protein K08874 TRRAP; transformation/transcription domain-associated protein E TREMEDRAFT_26842 hypothetical protein K11313 SUPT3H; transcription initiation protein SPT3 E TREMEDRAFT_62279 hypothetical protein K11359 SPT7; transcriptional activator SPT7 E TREMEDRAFT_72241 hypothetical protein K11360 SPT8; transcriptional activator SPT8 E TREMEDRAFT_42441 hypothetical protein K11362 HFI1; transcriptional coactivator HFI1/ADA1 E TREMEDRAFT_31549 hypothetical protein K11314 TADA2A; transcriptional adapter 2-alpha E TREMEDRAFT_13632 hypothetical protein K11315 TADA3; transcriptional adapter 3 E TREMEDRAFT_73329 hypothetical protein K03128 TAF2; transcription initiation factor TFIID subunit 2 E TREMEDRAFT_70068 hypothetical protein K03130 TAF5; transcription initiation factor TFIID subunit 5 E TREMEDRAFT_70674 hypothetical protein K03131 TAF6; transcription initiation factor TFIID subunit 6 E TREMEDRAFT_61532 hypothetical protein K03132 TAF7; transcription initiation factor TFIID subunit 7 E TREMEDRAFT_32628 hypothetical protein K03133 TAF9B; transcription initiation factor TFIID subunit 9B E TREMEDRAFT_19213 hypothetical protein K03134 TAF10; transcription initiation factor TFIID subunit 10 E TREMEDRAFT_33136 hypothetical protein K11364 SGF29; SAGA-associated factor 29 E TREMEDRAFT_69728 hypothetical protein K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] E TREMEDRAFT_34431 hypothetical protein K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] E TREMEDRAFT_37240 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3 D BAF/PBAF complex E TREMEDRAFT_73649 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 E TREMEDRAFT_69766 hypothetical protein K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C E TREMEDRAFT_42914 hypothetical protein K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D D SWI/SNF complex E TREMEDRAFT_24951 hypothetical protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] E TREMEDRAFT_73649 hypothetical protein K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 E TREMEDRAFT_74880 hypothetical protein K11768 ARP9; actin-related protein 9 D RSC complex E TREMEDRAFT_68547 hypothetical protein K11756 RSC1_2; chromatin structure-remodeling complex subunit RSC1/2 E TREMEDRAFT_60867 hypothetical protein K11761 NPL6; chromatin structure-remodeling complex protein RSC7 E TREMEDRAFT_38872 hypothetical protein K11763 RSC9; chromatin structure-remodeling complex subunit RSC9 E TREMEDRAFT_74880 hypothetical protein K11768 ARP9; actin-related protein 9 E TREMEDRAFT_26575 hypothetical protein K11770 SFH1; chromatin structure-remodeling complex subunit SFH1 E TREMEDRAFT_24951 hypothetical protein K11786 STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-] D Others E TREMEDRAFT_61316 hypothetical protein K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 C Other transcription-related factors D Transcription elongation factors E TREMEDRAFT_72529 hypothetical protein K03145 TFIIS; transcription elongation factor S-II E TREMEDRAFT_26002 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E TREMEDRAFT_71529 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 E TREMEDRAFT_71488 hypothetical protein K11292 SUPT6H; transcription elongation factor SPT6 D Transcription termination factor E TREMEDRAFT_13756 hypothetical protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 E TREMEDRAFT_70300 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E TREMEDRAFT_44189 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E TREMEDRAFT_73988 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E TREMEDRAFT_68721 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E TREMEDRAFT_73911 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E TREMEDRAFT_30754 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E TREMEDRAFT_74647 hypothetical protein K06100 SYMPK; symplekin E TREMEDRAFT_26308 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] E TREMEDRAFT_34408 hypothetical protein K14845 RAI1; RAT1-interacting protein E TREMEDRAFT_74479 hypothetical protein K15560 NRD1; protein NRD1 E TREMEDRAFT_31469 hypothetical protein K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] E TREMEDRAFT_26939 hypothetical protein K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] D PAF1 complex E TREMEDRAFT_32136 hypothetical protein K15174 PAF1; RNA polymerase II-associated factor 1 E TREMEDRAFT_27975 hypothetical protein K15175 CDC73; parafibromin E TREMEDRAFT_68569 hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9 E TREMEDRAFT_68884 hypothetical protein K15177 LEO1; RNA polymerase-associated protein LEO1 E TREMEDRAFT_69995 hypothetical protein K15178 RTF1; RNA polymerase-associated protein RTF1 D NELF complex D Super elongation complex (SEC) D Little elongation complex (LEC) D Brd4/P-TEFb complex D BUR kinase complex D CTDK-I complex E TREMEDRAFT_14841 hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] E TREMEDRAFT_34483 hypothetical protein K15564 CTK2; CTD kinase subunit beta E TREMEDRAFT_45988 hypothetical protein K15565 CTK3; CTD kinase subunit gamma D 7SK RNP complex D DBIRD complex D Others E TREMEDRAFT_64615 hypothetical protein K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] E TREMEDRAFT_34512 hypothetical protein K21751 DR1; down-regulator of transcription 1 E TREMEDRAFT_19812 hypothetical protein K21752 DRAP1; Dr1-associated corepressor E TREMEDRAFT_68167 hypothetical protein K15193 SPTY2D1; protein SPT2 E TREMEDRAFT_67978 hypothetical protein K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] E TREMEDRAFT_41494 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] E TREMEDRAFT_67036 hypothetical protein K17498 SPN1; transcription factor SPN1 E TREMEDRAFT_65875 hypothetical protein K20826 RPAP1; RNA polymerase II-associated protein 1 E TREMEDRAFT_62082 hypothetical protein K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] E TREMEDRAFT_45369 hypothetical protein K06666 TUP1; general transcriptional corepressor TUP1 E TREMEDRAFT_74309 hypothetical protein K06665 SSN6; general transcriptional corepressor CYC8 E TREMEDRAFT_20130 hypothetical protein K12412 MCM1; pheromone receptor transcription factor E TREMEDRAFT_61949 hypothetical protein K24104 GPN; GPN-loop GTPase E TREMEDRAFT_62656 hypothetical protein K24104 GPN; GPN-loop GTPase E TREMEDRAFT_44125 hypothetical protein K24104 GPN; GPN-loop GTPase B RNA polymerase III system C RNA polymerase III D Core subunits E TREMEDRAFT_72470 hypothetical protein K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] E TREMEDRAFT_29095 hypothetical protein K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] E TREMEDRAFT_34640 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E TREMEDRAFT_71650 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol III specific subunits E TREMEDRAFT_74583 hypothetical protein K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 E TREMEDRAFT_24620 hypothetical protein K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 E TREMEDRAFT_29606 hypothetical protein K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 E TREMEDRAFT_74612 hypothetical protein K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 E TREMEDRAFT_42634 hypothetical protein K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 E TREMEDRAFT_24045 hypothetical protein K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 D Pol I, II, III common subunits E TREMEDRAFT_29545 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E TREMEDRAFT_60336 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E TREMEDRAFT_24691 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E TREMEDRAFT_29645 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D TFIIIA E TREMEDRAFT_72635 hypothetical protein K09191 GTF3A; general transcription factor IIIA D TFIIIB E TREMEDRAFT_41045 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein E TREMEDRAFT_35498 hypothetical protein K15196 BRF1; transcription factor IIIB 90 kDa subunit D TFIIIC E TREMEDRAFT_27203 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) E TREMEDRAFT_73520 hypothetical protein K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] E TREMEDRAFT_68676 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) D TFIIIC, fungi type E TREMEDRAFT_68676 hypothetical protein K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) E TREMEDRAFT_27203 hypothetical protein K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) E TREMEDRAFT_27087 hypothetical protein K15205 TFC6; transcription factor C subunit 6 C Other transcription-related factors D snRNA-activating protein complex (SNAPc) D Octamer transcription factors D Others B RNA polymerase I system C RNA polymerase I D Core subunits E TREMEDRAFT_26611 hypothetical protein K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] E TREMEDRAFT_34640 hypothetical protein K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 E TREMEDRAFT_71650 hypothetical protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 D Pol I specific subunits E TREMEDRAFT_62362 hypothetical protein K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 E TREMEDRAFT_63917 hypothetical protein K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 E TREMEDRAFT_29871 hypothetical protein K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 D Pol I, II, III common subunits E TREMEDRAFT_29545 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 E TREMEDRAFT_60336 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 E TREMEDRAFT_24691 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 E TREMEDRAFT_29645 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 C Basal transcription factors D SL1/TIF-1B E TREMEDRAFT_41045 hypothetical protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C Other transcription-related factors D UBF D Transcription initiation factors E TREMEDRAFT_12429 hypothetical protein K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 E TREMEDRAFT_17734 hypothetical protein K15222 RRN11; RNA polymerase I-specific transcription initiation factor RRN11 E TREMEDRAFT_38764 hypothetical protein K15223 UAF30; upstream activation factor subunit UAF30 D Transcription elongation factors E TREMEDRAFT_26002 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E TREMEDRAFT_71529 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D NoRC (nucleolar remodeling complex) E TREMEDRAFT_68987 hypothetical protein K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] D CTDK-I complex E TREMEDRAFT_14841 hypothetical protein K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23] E TREMEDRAFT_34483 hypothetical protein K15564 CTK2; CTD kinase subunit beta E TREMEDRAFT_45988 hypothetical protein K15565 CTK3; CTD kinase subunit gamma D Transcription termination factors D Others # AProkaryotic type B Bacterial type C RNA polymerase D Core subunits D Sigma factors C Other transcription-related factors D RNA polymerase-associated proteins D Transcription elongation factors D Transcription termination factor B Archaeal type C RNA polymerase D Core subunits C Basal transcription factors D TFB D TFE E TREMEDRAFT_25597 hypothetical protein K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D TFS ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024