+D
#
Spliceosome - Tremella mesenterica
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D TREMEDRAFT_43823 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1
D TREMEDRAFT_18663 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
D TREMEDRAFT_56482 hypothetical protein K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
C SR proteins
D TREMEDRAFT_56308 hypothetical protein K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D TREMEDRAFT_37437 hypothetical protein K12897 TRA2; transformer-2 protein
D TREMEDRAFT_28739 hypothetical protein K12897 TRA2; transformer-2 protein
C General mRNP proteins
D TREMEDRAFT_33681 hypothetical protein K13091 RBM23_39; RNA-binding protein 23/39
#
AComplex A
B U1 snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D TREMEDRAFT_73567 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D TREMEDRAFT_72500 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D TREMEDRAFT_46029 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D TREMEDRAFT_34336 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D TREMEDRAFT_13947 hypothetical protein K12822 RBM25; RNA-binding protein 25
D TREMEDRAFT_61270 hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D TREMEDRAFT_65938 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D TREMEDRAFT_33230 hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D TREMEDRAFT_73600 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D TREMEDRAFT_59849 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D TREMEDRAFT_40877 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D TREMEDRAFT_41430 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D TREMEDRAFT_72698 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D TREMEDRAFT_37240 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D TREMEDRAFT_71330 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D TREMEDRAFT_26789 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_27938 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_60269 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D TREMEDRAFT_69998 hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D TREMEDRAFT_58042 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D TREMEDRAFT_41238 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D TREMEDRAFT_42981 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D TREMEDRAFT_71685 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D TREMEDRAFT_68179 hypothetical protein K12840 RBM17; splicing factor 45
D TREMEDRAFT_72598 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D TREMEDRAFT_34323 hypothetical protein K12842 SR140; U2-associated protein SR140
B Other components
C Complex A specific factors
D TREMEDRAFT_22615 hypothetical protein K02180 BUB3; cell cycle arrest protein BUB3
D TREMEDRAFT_16078 hypothetical protein K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D TREMEDRAFT_32917 hypothetical protein K13093 HTATSF1; HIV Tat-specific factor 1
D TREMEDRAFT_40757 hypothetical protein K13095 SF1; splicing factor 1
#
AComplex B
B U1 snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D TREMEDRAFT_73567 hypothetical protein K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D TREMEDRAFT_72500 hypothetical protein K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D TREMEDRAFT_46029 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D TREMEDRAFT_34336 hypothetical protein K12821 PRPF40; pre-mRNA-processing factor 40
D TREMEDRAFT_13947 hypothetical protein K12822 RBM25; RNA-binding protein 25
D TREMEDRAFT_61270 hypothetical protein K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D TREMEDRAFT_65938 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D TREMEDRAFT_33230 hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D TREMEDRAFT_73600 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D TREMEDRAFT_59849 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D TREMEDRAFT_40877 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D TREMEDRAFT_41430 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D TREMEDRAFT_72698 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D TREMEDRAFT_37240 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D TREMEDRAFT_71330 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D TREMEDRAFT_26789 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_27938 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_60269 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D TREMEDRAFT_69998 hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D TREMEDRAFT_58042 hypothetical protein K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D TREMEDRAFT_41238 hypothetical protein K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D TREMEDRAFT_42981 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D TREMEDRAFT_71685 hypothetical protein K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D TREMEDRAFT_68179 hypothetical protein K12840 RBM17; splicing factor 45
D TREMEDRAFT_72598 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D TREMEDRAFT_34323 hypothetical protein K12842 SR140; U2-associated protein SR140
B U4/U6.U5 tri-snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D TREMEDRAFT_31143 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D TREMEDRAFT_68409 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D TREMEDRAFT_24586 hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D TREMEDRAFT_29158 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D TREMEDRAFT_20231 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D TREMEDRAFT_24108 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D TREMEDRAFT_39244 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D TREMEDRAFT_13987 hypothetical protein K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D TREMEDRAFT_69097 hypothetical protein K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D TREMEDRAFT_27177 hypothetical protein K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D TREMEDRAFT_35229 hypothetical protein K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D TREMEDRAFT_71963 hypothetical protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D TREMEDRAFT_69686 hypothetical protein K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D TREMEDRAFT_71015 hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D TREMEDRAFT_61351 hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D TREMEDRAFT_38390 hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D TREMEDRAFT_70503 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D TREMEDRAFT_39472 hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D TREMEDRAFT_38519 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D TREMEDRAFT_36330 hypothetical protein K12859 TXNL4A; U5 snRNP protein, DIM1 family
D TREMEDRAFT_67751 hypothetical protein K13099 CD2BP2; CD2 antigen cytoplasmic tail-binding protein 2
C U4/U6.U5 tri-snRNP specific factors
D TREMEDRAFT_24325 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D TREMEDRAFT_34460 hypothetical protein K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D TREMEDRAFT_27148 hypothetical protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D TREMEDRAFT_65395 hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D TREMEDRAFT_18685 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D TREMEDRAFT_38044 hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D TREMEDRAFT_70811 hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D TREMEDRAFT_69595 hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D TREMEDRAFT_63092 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D TREMEDRAFT_22984 hypothetical protein K13104 ZNF830; zinc finger protein 830
B Other components
C Prp19 complex
D TREMEDRAFT_67061 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D TREMEDRAFT_40112 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D TREMEDRAFT_69942 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D TREMEDRAFT_27014 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D TREMEDRAFT_33472 hypothetical protein K12863 CWC15; protein CWC15
D TREMEDRAFT_25178 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D TREMEDRAFT_36956 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TREMEDRAFT_43142 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D TREMEDRAFT_45638 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D TREMEDRAFT_43021 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D TREMEDRAFT_34983 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D TREMEDRAFT_72516 hypothetical protein K12869 CRN; crooked neck
D TREMEDRAFT_24444 hypothetical protein K12873 BUD31; bud site selection protein 31
D TREMEDRAFT_43512 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D TREMEDRAFT_24766 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D TREMEDRAFT_45730 hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D TREMEDRAFT_29541 hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D TREMEDRAFT_28366 hypothetical protein K27398 CWC2; pre-mRNA-splicing factor CWC2
C RES complex
D TREMEDRAFT_68663 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D TREMEDRAFT_24060 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D TREMEDRAFT_24410 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D TREMEDRAFT_60098 hypothetical protein K13110 MFAP1; microfibrillar-associated protein 1
D TREMEDRAFT_20323 hypothetical protein K13113 UBL5; ubiquitin-like protein 5
#
AComplex C
B U2 snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D TREMEDRAFT_31143 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
D TREMEDRAFT_68409 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D TREMEDRAFT_65938 hypothetical protein K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D TREMEDRAFT_33230 hypothetical protein K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D TREMEDRAFT_73600 hypothetical protein K12825 SF3A1; splicing factor 3A subunit 1
D TREMEDRAFT_59849 hypothetical protein K12826 SF3A2; splicing factor 3A subunit 2
D TREMEDRAFT_40877 hypothetical protein K12827 SF3A3; splicing factor 3A subunit 3
D TREMEDRAFT_41430 hypothetical protein K12828 SF3B1; splicing factor 3B subunit 1
D TREMEDRAFT_72698 hypothetical protein K12829 SF3B2; splicing factor 3B subunit 2
D TREMEDRAFT_37240 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D TREMEDRAFT_71330 hypothetical protein K12831 SF3B4; splicing factor 3B subunit 4
D TREMEDRAFT_26789 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_27938 hypothetical protein K12832 SF3B5; splicing factor 3B subunit 5
D TREMEDRAFT_60269 hypothetical protein K12833 SF3B14; pre-mRNA branch site protein p14
D TREMEDRAFT_69998 hypothetical protein K12834 PHF5A; PHD finger-like domain-containing protein 5A
B U4/U6.U5 tri-snRNP components
C Sm proteins
D TREMEDRAFT_27133 hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D TREMEDRAFT_29897 hypothetical protein K11087 SNRPD1; small nuclear ribonucleoprotein D1
D TREMEDRAFT_30560 hypothetical protein K11096 SNRPD2; small nuclear ribonucleoprotein D2
D TREMEDRAFT_38820 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
D TREMEDRAFT_69713 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E
D TREMEDRAFT_67422 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F
D TREMEDRAFT_67521 hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D TREMEDRAFT_71015 hypothetical protein K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D TREMEDRAFT_39472 hypothetical protein K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D TREMEDRAFT_61351 hypothetical protein K12855 PRPF6; pre-mRNA-processing factor 6
D TREMEDRAFT_38390 hypothetical protein K12856 PRPF8; pre-mRNA-processing factor 8
D TREMEDRAFT_70503 hypothetical protein K12857 SNRNP40; Prp8 binding protein
D TREMEDRAFT_38519 hypothetical protein K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D TREMEDRAFT_24325 hypothetical protein K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D TREMEDRAFT_65395 hypothetical protein K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D TREMEDRAFT_18685 hypothetical protein K12849 PRPF38A; pre-mRNA-splicing factor 38A
D TREMEDRAFT_38044 hypothetical protein K13100 CWC22; pre-mRNA-splicing factor CWC22
D TREMEDRAFT_70811 hypothetical protein K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D TREMEDRAFT_69595 hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D TREMEDRAFT_63092 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D TREMEDRAFT_22984 hypothetical protein K13104 ZNF830; zinc finger protein 830
D TREMEDRAFT_42981 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D TREMEDRAFT_69868 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
B Other components
C Prp19-CDC5 complex
D TREMEDRAFT_67061 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D TREMEDRAFT_40112 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D TREMEDRAFT_69942 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D TREMEDRAFT_25178 hypothetical protein K12864 CTNNBL1; beta-catenin-like protein 1
D TREMEDRAFT_33472 hypothetical protein K12863 CWC15; protein CWC15
D TREMEDRAFT_27014 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
D TREMEDRAFT_36956 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D TREMEDRAFT_43142 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D TREMEDRAFT_45638 hypothetical protein K06063 SNW1; SNW domain-containing protein 1
D TREMEDRAFT_43021 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1
D TREMEDRAFT_34983 hypothetical protein K12868 SYF2; pre-mRNA-splicing factor SYF2
D TREMEDRAFT_72516 hypothetical protein K12869 CRN; crooked neck
D TREMEDRAFT_24444 hypothetical protein K12873 BUD31; bud site selection protein 31
D TREMEDRAFT_43512 hypothetical protein K12871 CCDC12; coiled-coil domain-containing protein 12
D TREMEDRAFT_24766 hypothetical protein K12870 ISY1; pre-mRNA-splicing factor ISY1
D TREMEDRAFT_45730 hypothetical protein K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D TREMEDRAFT_29541 hypothetical protein K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D TREMEDRAFT_68663 hypothetical protein K13106 BUD13; pre-mRNA-splicing factor CWC26
D TREMEDRAFT_24060 hypothetical protein K13107 RBMX2; RNA-binding motif protein, X-linked 2
D TREMEDRAFT_24410 hypothetical protein K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D TREMEDRAFT_73647 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D TREMEDRAFT_57751 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D TREMEDRAFT_31776 hypothetical protein K12877 MAGOH; protein mago nashi
D TREMEDRAFT_25312 hypothetical protein K12876 RBM8A; RNA-binding protein 8A
D TREMEDRAFT_28261 hypothetical protein K12878 THOC1; THO complex subunit 1
D TREMEDRAFT_29485 hypothetical protein K12879 THOC2; THO complex subunit 2
D TREMEDRAFT_66724 hypothetical protein K12881 THOC4; THO complex subunit 4
D TREMEDRAFT_57251 hypothetical protein K12881 THOC4; THO complex subunit 4
C Step II factors
D TREMEDRAFT_32328 hypothetical protein K12816 CDC40; pre-mRNA-processing factor 17
D TREMEDRAFT_35832 hypothetical protein K12817 PRPF18; pre-mRNA-splicing factor 18
D TREMEDRAFT_34550 hypothetical protein K12819 SLU7; pre-mRNA-processing factor SLU7
D TREMEDRAFT_71807 hypothetical protein K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D TREMEDRAFT_67867 hypothetical protein K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
C PPlases
D TREMEDRAFT_66807 hypothetical protein K12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]
D TREMEDRAFT_42115 hypothetical protein K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D TREMEDRAFT_44072 hypothetical protein K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D TREMEDRAFT_67548 hypothetical protein K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
C Complex C specific factors
D TREMEDRAFT_28204 hypothetical protein K13115 CCDC130; coiled-coil domain-containing protein 130
D TREMEDRAFT_32503 hypothetical protein K13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
D TREMEDRAFT_44066 hypothetical protein K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D TREMEDRAFT_13319 hypothetical protein K13118 DGCR14; protein DGCR14
D TREMEDRAFT_28162 hypothetical protein K13119 FAM50; protein FAM50
D TREMEDRAFT_66152 hypothetical protein K13120 FAM32A; protein FAM32A
D TREMEDRAFT_26773 hypothetical protein K13121 FRA10AC1; protein FRA10AC1
D TREMEDRAFT_71166 hypothetical protein K13122 FRG1; protein FRG1
D TREMEDRAFT_27509 hypothetical protein K13123 GPATCH1; G patch domain-containing protein 1
D TREMEDRAFT_69967 hypothetical protein K13124 MORG1; mitogen-activated protein kinase organizer 1
D TREMEDRAFT_67462 hypothetical protein K13125 NOSIP; nitric oxide synthase-interacting protein
D TREMEDRAFT_40410 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D TREMEDRAFT_30506 hypothetical protein K13126 PABPC; polyadenylate-binding protein
D TREMEDRAFT_43066 hypothetical protein K13127 RNF113A; RING finger protein 113A
D TREMEDRAFT_69868 hypothetical protein K13103 TFIP11; tuftelin-interacting protein 11
D TREMEDRAFT_68208 hypothetical protein K25058 CACTIN; cactin
D TREMEDRAFT_72280 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
D TREMEDRAFT_71215 hypothetical protein K26159 PRKRIP1; PRKR-interacting protein 1
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AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D TREMEDRAFT_71584 hypothetical protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
C Other proteins involved in snRNP biogenesis
D TREMEDRAFT_72598 hypothetical protein K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D TREMEDRAFT_65475 hypothetical protein K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D TREMEDRAFT_25761 hypothetical protein K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D TREMEDRAFT_42923 hypothetical protein K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D TREMEDRAFT_43282 hypothetical protein K06874 ZPR1; zinc finger protein ZPR1
B Minor spliceosome components
C Minor spliceosome specific factors
C Minor spliceosome associated proteins
D TREMEDRAFT_69595 hypothetical protein K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
C SR proteins
C SR-related proteins
D TREMEDRAFT_73795 hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1
C TREX complex
D TREMEDRAFT_28261 hypothetical protein K12878 THOC1; THO complex subunit 1
D TREMEDRAFT_29485 hypothetical protein K12879 THOC2; THO complex subunit 2
D TREMEDRAFT_66724 hypothetical protein K12881 THOC4; THO complex subunit 4
D TREMEDRAFT_57251 hypothetical protein K12881 THOC4; THO complex subunit 4
D TREMEDRAFT_70597 hypothetical protein K13174 THOC5; THO complex subunit 5
D TREMEDRAFT_73647 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D TREMEDRAFT_43516 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D TREMEDRAFT_71647 hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D TREMEDRAFT_27480 hypothetical protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
C RNA binding proteins (RBPs)
D TREMEDRAFT_70953 hypothetical protein K13192 RBM26; RNA-binding protein 26
D TREMEDRAFT_70756 hypothetical protein K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D TREMEDRAFT_71869 hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR
C Other SAPs
D TREMEDRAFT_28713 hypothetical protein K13205 AAR2; A1 cistron-splicing factor AAR2
D TREMEDRAFT_63959 hypothetical protein K13206 CCDC55; coiled-coil domain-containing protein 55
D TREMEDRAFT_67095 hypothetical protein K09528 DNAJC8; DnaJ homolog subfamily C member 8
D TREMEDRAFT_27662 hypothetical protein K13211 GCFC; GC-rich sequence DNA-binding factor
D TREMEDRAFT_45982 hypothetical protein K13212 LUC7L2; RNA-binding protein Luc7-like 2
D TREMEDRAFT_73911 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D TREMEDRAFT_30754 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D TREMEDRAFT_41913 hypothetical protein K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D TREMEDRAFT_25323 hypothetical protein K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D TREMEDRAFT_26590 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
D TREMEDRAFT_64085 hypothetical protein K13220 WBP4; WW domain-binding protein 4
D TREMEDRAFT_33679 hypothetical protein K23966 CCNL; cyclin L
D TREMEDRAFT_74581 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D TREMEDRAFT_59006 hypothetical protein K24939 CWF19L1; CWF19-like protein 1
D TREMEDRAFT_68880 hypothetical protein K24940 CWF19L2; CWF19-like protein 2
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ASplicing related RNAs
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 13, 2024