+F Repair protein KO #

  DNA Repair and Recombination Proteins - Tremella mesenterica

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D TREMEDRAFT_35180 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E TREMEDRAFT_29872 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E TREMEDRAFT_65863 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E TREMEDRAFT_61328 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E TREMEDRAFT_68703 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E TREMEDRAFT_23302 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E TREMEDRAFT_63758 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E TREMEDRAFT_33014 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E TREMEDRAFT_41480 hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F TREMEDRAFT_69477 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F TREMEDRAFT_68559 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 F TREMEDRAFT_59259 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 F TREMEDRAFT_62821 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F TREMEDRAFT_33168 hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F TREMEDRAFT_45435 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F TREMEDRAFT_24290 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] E TREMEDRAFT_38959 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E TREMEDRAFT_69192 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E TREMEDRAFT_25666 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors E TREMEDRAFT_25387 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other BER factors E TREMEDRAFT_70993 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E TREMEDRAFT_59866 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E TREMEDRAFT_68510 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E TREMEDRAFT_26921 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F TREMEDRAFT_33288 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein F TREMEDRAFT_68394 hypothetical protein K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F TREMEDRAFT_30658 ring box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F TREMEDRAFT_24724 hypothetical protein K10609 CUL4; cullin 4 F TREMEDRAFT_71141 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F TREMEDRAFT_68071 hypothetical protein K15082 RAD7; DNA repair protein RAD7 F TREMEDRAFT_36553 hypothetical protein K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F TREMEDRAFT_40446 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F TREMEDRAFT_70991 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F TREMEDRAFT_45370 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F TREMEDRAFT_62158 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F TREMEDRAFT_29545 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F TREMEDRAFT_60336 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F TREMEDRAFT_71846 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F TREMEDRAFT_24691 hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F TREMEDRAFT_29252 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F TREMEDRAFT_29645 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 F TREMEDRAFT_44159 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 E Cul4-CSA complex F TREMEDRAFT_30658 ring box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F TREMEDRAFT_24724 hypothetical protein K10609 CUL4; cullin 4 F TREMEDRAFT_71141 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F TREMEDRAFT_65558 hypothetical protein K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E TREMEDRAFT_68365 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E TREMEDRAFT_30972 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E TREMEDRAFT_70349 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E TREMEDRAFT_72606 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E TREMEDRAFT_62112 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E TREMEDRAFT_33390 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E TREMEDRAFT_29558 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E TREMEDRAFT_33381 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E TREMEDRAFT_25459 hypothetical protein K06634 CCNH; cyclin H E TREMEDRAFT_35912 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E TREMEDRAFT_67478 hypothetical protein K07466 RFA1; replication factor A1 E TREMEDRAFT_18062 hypothetical protein K10739 RFA2; replication factor A2 E TREMEDRAFT_62334 hypothetical protein K10740 RPA3; replication factor A3 D Other NER factors E TREMEDRAFT_63667 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells E TREMEDRAFT_23521 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1 E TREMEDRAFT_62855 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E TREMEDRAFT_43101 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5 E TREMEDRAFT_25666 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E TREMEDRAFT_27920 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19 E TREMEDRAFT_67483 hypothetical protein K26403 CIAO2; cytosolic iron-sulfur assembly component 2 E TREMEDRAFT_70610 hypothetical protein K03869 CUL3; cullin 3 E TREMEDRAFT_28751 hypothetical protein K03872 ELOC; elongin-C C MMR (mismatch excision repair) D Mismatch and loop recognition factors E TREMEDRAFT_30126 hypothetical protein K08735 MSH2; DNA mismatch repair protein MSH2 E TREMEDRAFT_74736 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3 E TREMEDRAFT_40008 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E TREMEDRAFT_69817 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1 E TREMEDRAFT_25119 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2 E TREMEDRAFT_34488 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3 D DNA polymerase delta complex E TREMEDRAFT_69477 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E TREMEDRAFT_68559 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2 E TREMEDRAFT_59259 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 E TREMEDRAFT_62821 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E TREMEDRAFT_67478 hypothetical protein K07466 RFA1; replication factor A1 E TREMEDRAFT_18062 hypothetical protein K10739 RFA2; replication factor A2 E TREMEDRAFT_62334 hypothetical protein K10740 RPA3; replication factor A3 D RFC (replication factor C) E TREMEDRAFT_32699 hypothetical protein K10754 RFC1; replication factor C subunit 1 E TREMEDRAFT_44679 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E TREMEDRAFT_74703 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 E TREMEDRAFT_30209 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 E TREMEDRAFT_69661 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E TREMEDRAFT_38959 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E TREMEDRAFT_43853 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E TREMEDRAFT_25666 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E TREMEDRAFT_71264 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E TREMEDRAFT_72714 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 E TREMEDRAFT_33359 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E TREMEDRAFT_72714 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 E TREMEDRAFT_33359 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA complex E TREMEDRAFT_70770 hypothetical protein K04482 RAD51; DNA repair protein RAD51 D RecA family proteins E TREMEDRAFT_70770 hypothetical protein K04482 RAD51; DNA repair protein RAD51 E TREMEDRAFT_43150 hypothetical protein K10870 RAD51L2; RAD51-like protein 2 E TREMEDRAFT_63698 hypothetical protein K10958 RAD57; DNA repair protein RAD57 D Rad52 family proteins D Rad54 family proteins E TREMEDRAFT_70028 hypothetical protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] E TREMEDRAFT_36825 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D RecQ family DNA helicases E TREMEDRAFT_12143 hypothetical protein K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E TREMEDRAFT_73248 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D RPA (replication factor A) E TREMEDRAFT_67478 hypothetical protein K07466 RFA1; replication factor A1 E TREMEDRAFT_18062 hypothetical protein K10739 RFA2; replication factor A2 E TREMEDRAFT_62334 hypothetical protein K10740 RPA3; replication factor A3 D Protein phosphatase 4 E TREMEDRAFT_72937 hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E TREMEDRAFT_72922 hypothetical protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E TREMEDRAFT_24823 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E TREMEDRAFT_59633 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6 E TREMEDRAFT_74710 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E TREMEDRAFT_59831 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E TREMEDRAFT_66806 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E TREMEDRAFT_15378 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] E TREMEDRAFT_45770 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E TREMEDRAFT_73470 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] E TREMEDRAFT_39085 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E TREMEDRAFT_36027 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1 E TREMEDRAFT_59752 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E TREMEDRAFT_58958 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E TREMEDRAFT_30400 hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex E TREMEDRAFT_26590 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E TREMEDRAFT_71662 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D MRX complex E TREMEDRAFT_72714 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11 E TREMEDRAFT_33359 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D DNA Ligase 4 complex E TREMEDRAFT_67336 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] E TREMEDRAFT_73368 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E TREMEDRAFT_26921 hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E TREMEDRAFT_32680 hypothetical protein K03513 POLM; DNA polymerase mu [EC:2.7.7.7] E TREMEDRAFT_25387 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other NHEJ factors E TREMEDRAFT_59866 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) E TREMEDRAFT_73248 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D FANCD2-I complex D Downstream FA components D Other FA pathway factors E TREMEDRAFT_72742 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E TREMEDRAFT_70770 hypothetical protein K04482 RAD51; DNA repair protein RAD51 E TREMEDRAFT_43150 hypothetical protein K10870 RAD51L2; RAD51-like protein 2 E TREMEDRAFT_72661 hypothetical protein K11137 TELO2; telomere length regulation protein E TREMEDRAFT_64196 hypothetical protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E TREMEDRAFT_69090 hypothetical protein K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] D Ubiquitin ligases D Others E TREMEDRAFT_39696 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1 E TREMEDRAFT_67947 hypothetical protein K24752 WDR70; WD repeat-containing protein 70 E TREMEDRAFT_71264 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D TREMEDRAFT_12962 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D TREMEDRAFT_68079 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7] D TREMEDRAFT_28996 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D TREMEDRAFT_30704 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D TREMEDRAFT_43536 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D TREMEDRAFT_69003 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D TREMEDRAFT_43337 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D TREMEDRAFT_60987 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D TREMEDRAFT_27733 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D TREMEDRAFT_70310 hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D TREMEDRAFT_40481 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D TREMEDRAFT_38959 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D TREMEDRAFT_63589 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D TREMEDRAFT_60659 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] D TREMEDRAFT_25550 hypothetical protein K10903 HUS1; HUS1 checkpoint protein D TREMEDRAFT_70218 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D TREMEDRAFT_30228 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein D TREMEDRAFT_44679 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D TREMEDRAFT_74703 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4 D TREMEDRAFT_30209 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 D TREMEDRAFT_69661 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D TREMEDRAFT_70218 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D TREMEDRAFT_65909 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D TREMEDRAFT_60260 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 D TREMEDRAFT_58988 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 C Triple T complex D TREMEDRAFT_72661 hypothetical protein K11137 TELO2; telomere length regulation protein D TREMEDRAFT_68736 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D TREMEDRAFT_74048 hypothetical protein K23388 UBL4; ubiquitin-like protein 4 D TREMEDRAFT_38601 hypothetical protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D TREMEDRAFT_32442 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D TREMEDRAFT_64958 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D TREMEDRAFT_27276 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D TREMEDRAFT_45682 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D TREMEDRAFT_24714 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D TREMEDRAFT_37204 hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D TREMEDRAFT_66766 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D TREMEDRAFT_63566 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D TREMEDRAFT_68115 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D TREMEDRAFT_72280 hypothetical protein K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D TREMEDRAFT_35002 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] C Nucleases D TREMEDRAFT_28150 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein D TREMEDRAFT_28516 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] C Helicases D TREMEDRAFT_74496 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-] C PSO4 complex D TREMEDRAFT_67061 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D TREMEDRAFT_40112 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D TREMEDRAFT_69942 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D TREMEDRAFT_27014 hypothetical protein K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D TREMEDRAFT_41797 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TREMEDRAFT_39705 hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D TREMEDRAFT_31348 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D TREMEDRAFT_44873 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D TREMEDRAFT_35180 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E TREMEDRAFT_29872 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E TREMEDRAFT_71310 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E TREMEDRAFT_61328 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E TREMEDRAFT_15463 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E TREMEDRAFT_23302 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E TREMEDRAFT_39321 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors E TREMEDRAFT_39321 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D TREMEDRAFT_41797 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 3, 2024