KEGG Orthology (KO) - Candidatus Puniceispirillum marinum

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
     00190 Oxidative phosphorylation [PATH:apb00190]
     00195 Photosynthesis
     00196 Photosynthesis - antenna proteins
     00710 Carbon fixation in photosynthetic organisms
     00720 Carbon fixation pathways in prokaryotes
     00680 Methane metabolism [PATH:apb00680]
     00910 Nitrogen metabolism [PATH:apb00910]
     00920 Sulfur metabolism [PATH:apb00920]
       SAR116_1439 taurine transport system periplasmic protein
       SAR116_1441 probable taurine uptake ABC transporter permease protein
       SAR116_1440 probable taurin uptake ABC transporter ATP-binding protein
       SAR116_2101 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein
       SAR116_2100 ABC transporter permease protein
       SAR116_2098 nitrate ABC transporter, permease protein, putative
       SAR116_2097 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component-like protein
       SAR116_2099 ABC transporter ATP-binding protein
       SAR116_1532 binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein
       SAR116_1531 sulfate adenylyltransferase, small subunit
       SAR116_1533 3'(2'),5'-bisphosphate nucleotidase
       SAR116_2105 DMSO reductase chain A
       SAR116_2106 DMSO reductase chain B
       SAR116_2107 DMSO reductase chain C
       SAR116_1894 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein
       SAR116_0447 thiosulfate sulfurtransferase
       SAR116_1454 Thiosulfate sulfurtransferase
       SAR116_1024 serine O-acetyltransferase
       SAR116_0446 Pyridoxal-5'-phosphate-dependent protein beta subunit
       SAR116_1336 MetA1
       SAR116_1729 Homoserine O-acetyltransferase
       SAR116_1552 O-succinylhomoserine sulfhydrylase
       SAR116_0298 selenium-binding protein, putative
       SAR116_2102 methanesulfonate monooxygenase, hydroxylase alpha (large) subunit
       SAR116_2109 methanesulfonate monooxygenase, hydroxylase alpha (large) subunit
       SAR116_2103 methanesulfonate monooxygenase, hydroxylase beta subunit
       SAR116_0074 aminomethyl transferase family protein, putative
       SAR116_1365 acyl-CoA synthase
       SAR116_0302 acyl-CoA synthase
       SAR116_1180 acyl-CoA dehydrogenase
K15551 tauA; taurine transport system substrate-binding protein
K15552 tauC; taurine transport system permease protein
K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
K15553 ssuA; sulfonate transport system substrate-binding protein
K15554 ssuC; sulfonate transport system permease protein
K15554 ssuC; sulfonate transport system permease protein
K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
K16968 msmA; methanesulfonate monooxygenase subunit alpha [EC:1.14.13.111]
K16968 msmA; methanesulfonate monooxygenase subunit alpha [EC:1.14.13.111]
K16969 msmB; methanesulfonate monooxygenase subunit beta [EC:1.14.13.111]
K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:apb03000]
     03021 Transcription machinery [BR:apb03021]
     03019 Messenger RNA biogenesis [BR:apb03019]
     03041 Spliceosome
     03011 Ribosome [BR:apb03011]
     03009 Ribosome biogenesis [BR:apb03009]
     03016 Transfer RNA biogenesis [BR:apb03016]
       SAR116_0503 Glutamyl- and glutaminyl-tRNA synthetase
       SAR116_0679 glutamyl-tRNA synthetase
       SAR116_0523 prolyl-tRNA synthetase
       SAR116_1144 Isoleucyl-tRNA synthetase, class Ia
       SAR116_1653 Leucyl-tRNA synthetase, class Ia
       SAR116_0358 Methionyl-tRNA synthetase, class Ia
       SAR116_0421 Arginyl-tRNA synthetase
       SAR116_1890 aspartyl-tRNA synthetase
       SAR116_0089 alanyl-tRNA synthetase
       SAR116_1235 Threonyl-tRNA synthetase
       SAR116_0412 Serine--tRNA ligase
       SAR116_0678 Cysteine--tRNA ligase
       SAR116_0427 Valyl-tRNA synthetase, class Ia
       SAR116_1930 Histidyl-tRNA synthetase, class IIa
       SAR116_1230 Phenylalanyl-tRNA synthetase, alpha subunit
       SAR116_1229 phenylalanyl-tRNA synthetase beta subunit
       SAR116_1026 Tyrosyl-tRNA synthetase, class Ib
       SAR116_1596 Tryptophanyl-tRNA synthetase, class Ib
       SAR116_1629 Hypothetical 132 kDa HIT-like protein in hisE 3'region
       SAR116_1584 hypothetical protein
       SAR116_1496 Pseudouridylate synthase
       SAR116_1578 tRNA pseudouridine synthase B
       SAR116_1023 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme
       SAR116_0691 Sua5/YciO/YrdC/YwlC family protein
       SAR116_0714 tRNA delta(2)-isopentenylpyrophosphate transferase
       SAR116_1645 tRNA modification GTPase TrmE
       SAR116_1646 glucose-inhibited division protein A
       SAR116_0434 selenide, water dikinase
       SAR116_1533 3'(2'),5'-bisphosphate nucleotidase
       SAR116_1503 ribonuclease P protein component
       SAR116_1620 RNase PH
       SAR116_1244 3'-5' exonuclease family protein, putative
       SAR116_0622 ribonuclease D
       SAR116_2318 ABC transporter component
       SAR116_1901 lysyl-tRNA synthetase
       SAR116_2275 Glycine--tRNA ligase
       SAR116_2276 Glycyl-tRNA synthetase
       SAR116_1153 glutamyl-tRNA synthetase, class Ic
       SAR116_1799 YbaK/prolyl-tRNA synthetase domain protein
       SAR116_1138 CMP/dCMP deaminase, zinc-binding protein
       SAR116_1089 tRNA-dihydrouridine synthase A
       SAR116_0214 NifR3-like protein
       SAR116_1590 2-methylthioadenine synthetase
       SAR116_1813 MiaB-like tRNA modifying enzyme
       SAR116_1361 methyltransferase domain protein
       SAR116_0676 RNA methyltransferase TrmH, group 1
       SAR116_0402 gid protein
       SAR116_1819 tRNA (guanine-N(1)-)-methyltransferase
       SAR116_1175 RNA methyltransferase, TrmH family, group 2
       SAR116_1397 tRNA/rRNA methyltransferase (SpoU)
       SAR116_1021 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       SAR116_2349 SirA family protein
       SAR116_0019 Iron-sulfur cluster assembly protein
       SAR116_1329 glycine cleavage T protein
       SAR116_0654 protein of unknown function DUF752
       SAR116_0028 Queuosine biosynthesis protein
       SAR116_0030 iron-sulfur cluster binding protein
       SAR116_0435 Rhodanese-like protein
       SAR116_0029 Queuine/archaeosine tRNA-ribosyltransferase
       SAR116_2302 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
       SAR116_1592 putative protease
       SAR116_1476 putative metalloendopeptidase, glycoprotease family
       SAR116_1263 hypothetical protein
       SAR116_0618 ribonuclease R
       SAR116_1576 Polyribonucleotide nucleotidyltransferase
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K06020 ettA; energy-dependent translational throttle protein EttA
K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K03437 spoU; RNA methyltransferase, TrmH family
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
     03012 Translation factors [BR:apb03012]
     03110 Chaperones and folding catalysts [BR:apb03110]
     04131 Membrane trafficking [BR:apb04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:apb03032]
     03036 Chromosome and associated proteins [BR:apb03036]
     03400 DNA repair and recombination proteins [BR:apb03400]
     03029 Mitochondrial biogenesis [BR:apb03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 22, 2024