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KO |
Eukaryotic type
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Prokaryotic type
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SSBR (single strand breaks repair)
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Direct repair
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BER (base exicision repair)
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DNA glycosylases
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AP endonucleases
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RecJ
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BafPKo_0256 recJ; single-stranded-DNA-specific exonuclease RecJ
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
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DNA ligase
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DNA polymerase I
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NER (nucleotide excision repair)
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MMR (mismatch excision repair)
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DSBR (double strand breaks repair)
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HR (homologous recombination)
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RecBC pathway proteins
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RecFOR pathway proteins
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BafPKo_0129 recA; protein RecA
BafPKo_0597 recG; ATP-dependent DNA helicase RecG
BafPKo_0256 recJ; single-stranded-DNA-specific exonuclease RecJ
BafPKo_0023 ruvA; holliday junction DNA helicase RuvA
BafPKo_0022 ruvB; holliday junction DNA helicase RuvB
|
K03553 recA; recombination protein RecA
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
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AddAB pathway proteins
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Other HR factor
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Archaeal homologous recombinant proteins
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NHEJ (non-homologous end-joining)
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Two-component NHEJ DNA repair complex
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SHIIR (short-homology-independent illegitimate recombination)
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SHDIR (short-homology-dependent illegitimate recombination)
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RecET pathway
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BafPKo_0256 recJ; single-stranded-DNA-specific exonuclease RecJ
BafPKo_0567 ligA; DNA ligase, NAD-dependent
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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Facilitator
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Supressor
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TLS (translesion DNA synthesis) factors
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Other factors with a suspected DNA repair function
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