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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bar03030]
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03410 Base excision repair [PATH:bar03410]
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 GBAA_1570 nth; endonuclease III
GBAA_5648 ung; uracil-DNA glycosylase
GBAA_0522 mutY; A/G-specific adenine glycosylase
GBAA_0869 methylpurine-DNA glycosylase family protein
GBAA_4830 mutM; formamidopyrimidine-DNA glycosylase
GBAA_3871 alkA; DNA-3-methyladenine glycosidase
GBAA_1552 uracil-DNA glycosylase family protein
GBAA_3868 exoA; exodeoxyribonuclease III
GBAA_4508 nfo; deoxyribonuclease IV (phage-T(4)-induced)
GBAA_4831 polA; DNA polymerase I
GBAA_4639 recJ; single-stranded-DNA-specific exonuclease RecJ
GBAA_0306 ligA; DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:bar03420]
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03430 Mismatch repair [PATH:bar03430]
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03440 Homologous recombination [PATH:bar03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bar03000]
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03021 Transcription machinery [BR:bar03021]
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03019 Messenger RNA biogenesis [BR:bar03019]
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03041 Spliceosome
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03011 Ribosome [BR:bar03011]
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03009 Ribosome biogenesis [BR:bar03009]
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03016 Transfer RNA biogenesis [BR:bar03016]
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03012 Translation factors [BR:bar03012]
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03110 Chaperones and folding catalysts [BR:bar03110]
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04131 Membrane trafficking [BR:bar04131]
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04121 Ubiquitin system [BR:bar04121]
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03051 Proteasome
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03032 DNA replication proteins [BR:bar03032]
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03036 Chromosome and associated proteins [BR:bar03036]
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03400 DNA repair and recombination proteins [BR:bar03400]
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GBAA_2039 ogt1; methylated-DNA--protein-cysteine S-methyltransferase
GBAA_3180 deoxyribodipyrimidine photolyase family protein
GBAA_5648 ung; uracil-DNA glycosylase
GBAA_0869 methylpurine-DNA glycosylase family protein
GBAA_0522 mutY; A/G-specific adenine glycosylase
GBAA_1570 nth; endonuclease III
GBAA_0542 mutT/nudix family protein
GBAA_5385 mutT/nudix family protein
GBAA_3060 mutT/nudix family protein
GBAA_0622 mutT/nudix family protein
GBAA_2685 mutT/nudix family protein
GBAA_1816 mutT/nudix family protein
GBAA_5043 mutTA; antimutator 8-oxo-(dGTP/GTP)ase
GBAA_4112 dut; prophage LambdaBa02, deoxyuridine 5'-triphosphate nucleotidohydrolase
GBAA_3869 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase
GBAA_3870 ogt2; methylated-DNA--protein-cysteine S-methyltransferase
GBAA_1552 uracil-DNA glycosylase family protein
GBAA_3871 alkA; DNA-3-methyladenine glycosidase
GBAA_4830 mutM; formamidopyrimidine-DNA glycosylase
GBAA_3868 exoA; exodeoxyribonuclease III
GBAA_4508 nfo; deoxyribonuclease IV (phage-T(4)-induced)
GBAA_4639 recJ; single-stranded-DNA-specific exonuclease RecJ
GBAA_0306 ligA; DNA ligase, NAD-dependent
GBAA_4831 polA; DNA polymerase I
GBAA_5395 uvrA; excinuclease ABC, A subunit
GBAA_5396 uvrB; excinuclease ABC, B subunit
GBAA_4757 uvrC; excinuclease ABC, C subunit
GBAA_0305 pcrA; ATP-dependent DNA helicase PcrA
GBAA_1040 helicase, UvrD/Rep family
GBAA_2814 uvrD/Rep helicase family protein
GBAA_1239 ATP-dependent DNA helicase, UvrD/REP family
GBAA_0102 rpoB; DNA-directed RNA polymerase, beta subunit
GBAA_0103 rpoC; DNA-directed RNA polymerase, beta' subunit
GBAA_0137 rpoA; DNA-directed RNA polymerase, alpha subunit
GBAA_5584 rpoE; DNA-directed RNA polymerase, delta subunit
GBAA_4008 rpoZ; DNA-directed RNA polymerase, omega subunit
GBAA_0052 mfd; transcription-repair coupling factor
GBAA_3905 mutS; DNA mismatch repair protein MutS
GBAA_4794 MutS2 family protein
GBAA_3547 putative MutS family protein
GBAA_3904 mutL; DNA mismatch repair protein MutL
GBAA_4404 xseA; exodeoxyribonuclease VII, large subunit
GBAA_4403 xseB; exodeoxyribonuclease VII, small subunit
GBAA_4849 dnaE; DNA polymerase III, alpha subunit
GBAA_3955 polC; DNA polymerase III, alpha subunit, Gram-positive type
GBAA_2684 dnaN2; DNA polymerase III, beta subunit
GBAA_0002 dnaN1; DNA polymerase III, beta subunit
GBAA_4548 holA; DNA polymerase III, delta subunit
GBAA_0028 holB; DNA polymerase III, delta prime subunit
GBAA_3672 putative DNA polymerase III, epsilon subunit
GBAA_0019 dnaX; DNA polymerase III, gamma and tau subunits
GBAA_2168 ssb2; single-stranded DNA-binding protein
GBAA_5722 ssb1; single-stranded DNA-binding protein
GBAA_4622 putative helicase
GBAA_4651 ruvA; Holliday junction DNA helicase RuvA
GBAA_4650 ruvB; Holliday junction DNA helicase RuvB
GBAA_4006 priA; primosomal protein N`
GBAA_2360 putative exonuclease
GBAA_2359 putative exonuclease SbcD
GBAA_0081 radA; DNA repair protein RadA
GBAA_0004 recF; DNA replication and repair protein RecF
GBAA_3993 recG; ATP-dependent DNA helicase RecG
GBAA_4522 recO; recombination protein O
GBAA_0021 recR; recombination protein RecR
GBAA_4397 recN; DNA repair protein RecN
GBAA_1573 recU; recombination protein U
GBAA_1142 addA; ATP-dependent nuclease, subunit A
GBAA_1141 addB; ATP-dependent nuclease, subunit B
GBAA_0808 Ku protein
GBAA_0006 gyrA; DNA gyrase, A subunit
GBAA_0005 gyrB; DNA gyrase, B subunit
GBAA_3971 topA; DNA topoisomerase I
GBAA_pXO1_0213 topX; DNA topoisomerase 1
GBAA_1531 hup1; DNA-binding protein HU
GBAA_2377 hup2; DNA-binding protein HU
GBAA_3858 hup3; DNA-binding protein HU
GBAA_2818 recQ2; ATP-dependent DNA helicase RecQ
GBAA_1505 recQ1; ATP-dependent DNA helicase RecQ
GBAA_4366 putative DNA-damage-inducible protein P
GBAA_3288 impB/mucB/samB family protein
GBAA_pXO2_0094 impB/mucB/samB family protein
GBAA_3754 lexA; LexA repressor
GBAA_0516 recX domain protein
GBAA_4795 PHP domain protein
GBAA_1565 putative DnaQ family exonuclease/DinG family helicase
GBAA_1586 conserved hypothetical protein
GBAA_1371 nrdE; ribonucleoside-diphosphate reductase, alpha subunit, group I intron-containing
GBAA_1372 nrdF; ribonucleoside-diphosphate reductase, beta subunit
GBAA_4852 DHH subfamily 1 protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K10979 ku; DNA end-binding protein Ku
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:bar03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Bacillus anthracis Ames Ancestor